RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 ITGB4P16144 1822 aa11.16□□□□□ -0.62
PRPF8-213ENST00000576407 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
PRPF8-213ENST00000576407 NHSQ6T4R5 1651 aa11.15□□□□□ -0.62
PRPF8-213ENST00000576407 SBF2Q86WG5 1849 aa11.15□□□□□ -0.62
PRPF8-213ENST00000576407 TAF7Q15545 349 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-213ENST00000576407 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
PRPF8-213ENST00000576407 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
PRPF8-213ENST00000576407 EP400Q96L91 3159 aa11.15□□□□□ -0.62
PRPF8-213ENST00000576407 IL16Q14005 1332 aa11.14□□□□□ -0.63
PRPF8-213ENST00000576407 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
PRPF8-213ENST00000576407 PTF1AQ7RTS3 328 aa11.14□□□□□ -0.63
PRPF8-213ENST00000576407 PIGBQ92521 554 aa11.14□□□□□ -0.63
PRPF8-213ENST00000576407 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
PRPF8-213ENST00000576407 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
PRPF8-213ENST00000576407 BTBD11A6QL63 1104 aa11.13□□□□□ -0.63
PRPF8-213ENST00000576407 CHL1O00533 1208 aa11.13□□□□□ -0.63
PRPF8-213ENST00000576407 ZNF853P0CG23 659 aa11.13□□□□□ -0.63
PRPF8-213ENST00000576407 GNAI1P63096 354 aa11.13□□□□□ -0.63
PRPF8-213ENST00000576407 CDCA7LQ96GN5 454 aa11.13□□□□□ -0.63
PRPF8-213ENST00000576407 CFAP44Q96MT7 982 aa11.13□□□□□ -0.63
PRPF8-213ENST00000576407 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-213ENST00000576407 IFT57Q9NWB7 429 aa11.13□□□□□ -0.63
PRPF8-213ENST00000576407 TRIM37O94972 964 aa11.12□□□□□ -0.63
PRPF8-213ENST00000576407 BCL11BQ9C0K0 894 aaPredicted RBP11.12□□□□□ -0.63
PRPF8-213ENST00000576407 BABAM1Q9NWV8 329 aa11.12□□□□□ -0.63
PRPF8-213ENST00000576407 TSPYL4Q9UJ04 414 aa11.12□□□□□ -0.63
PRPF8-213ENST00000576407 KAT6BQ8WYB5 2073 aa11.12□□□□□ -0.63
PRPF8-213ENST00000576407 KDM3BQ7LBC6 1761 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 PAPPAQ13219 1627 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 E9PSI1 815 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 SLFN5Q08AF3 891 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 SLC39A6Q13433 755 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 ZNF790Q6PG37 636 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 TSR2Q969E8 191 aaKnown RBP11.11□□□□□ -0.63
PRPF8-213ENST00000576407 MBIPQ9NS73 344 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 ASAP1Q9ULH1 1129 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 BTAF1O14981 1849 aa11.11□□□□□ -0.63
PRPF8-213ENST00000576407 KCNQ3O43525 872 aa11.1□□□□□ -0.63
PRPF8-213ENST00000576407 TTC5Q8N0Z6 440 aa11.1□□□□□ -0.63
PRPF8-213ENST00000576407 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
PRPF8-213ENST00000576407 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
PRPF8-213ENST00000576407 TRMT2AQ8IZ69 625 aaKnown RBP11.09□□□□□ -0.63
PRPF8-213ENST00000576407 TNS1Q9HBL0 1735 aaKnown RBP11.09□□□□□ -0.63
PRPF8-213ENST00000576407 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
PRPF8-213ENST00000576407 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
PRPF8-213ENST00000576407 PALLDQ8WX93 1383 aa11.08□□□□□ -0.64
PRPF8-213ENST00000576407 PTCD1O75127 700 aaKnown RBP11.08□□□□□ -0.64
PRPF8-213ENST00000576407 EIF4A1P60842 406 aaKnown RBP11.08□□□□□ -0.64
PRPF8-213ENST00000576407 SMARCC1Q92922 1105 aaPredicted RBP11.08□□□□□ -0.64
PRPF8-213ENST00000576407 ZNF496Q96IT1 587 aaPredicted RBP11.08□□□□□ -0.64
PRPF8-213ENST00000576407 APBA3O96018 575 aa11.07□□□□□ -0.64
PRPF8-213ENST00000576407 DUSP27Q5VZP5 1158 aa11.07□□□□□ -0.64
PRPF8-213ENST00000576407 HEG1Q9ULI3 1381 aa11.06□□□□□ -0.64
PRPF8-213ENST00000576407 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
PRPF8-213ENST00000576407 KRT24Q2M2I5 525 aa11.06□□□□□ -0.64
PRPF8-213ENST00000576407 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
PRPF8-213ENST00000576407 C8orf58Q8NAV2 365 aa11.06□□□□□ -0.64
PRPF8-213ENST00000576407 FMNL2Q96PY5 1086 aa11.06□□□□□ -0.64
PRPF8-213ENST00000576407 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
PRPF8-213ENST00000576407 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
PRPF8-213ENST00000576407 LY75O60449 1722 aa11.05□□□□□ -0.64
PRPF8-213ENST00000576407 GIGYF1O75420 1035 aaPredicted RBP11.05□□□□□ -0.64
PRPF8-213ENST00000576407 SIK1P57059 783 aa11.05□□□□□ -0.64
PRPF8-213ENST00000576407 TSPYL6Q8N831 410 aa11.05□□□□□ -0.64
PRPF8-213ENST00000576407 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
PRPF8-213ENST00000576407 PRAMEF22A3QJZ6 481 aa11.04□□□□□ -0.64
PRPF8-213ENST00000576407 ELL2O00472 640 aaPredicted RBP11.04□□□□□ -0.64
PRPF8-213ENST00000576407 PLSCR1O15162 318 aa11.04□□□□□ -0.64
PRPF8-213ENST00000576407 SNRPA1P09661 255 aaKnown RBP11.04□□□□□ -0.64
PRPF8-213ENST00000576407 SF3B2Q13435 895 aaKnown RBP11.04□□□□□ -0.64
PRPF8-213ENST00000576407 CCDC125Q86Z20 511 aa11.04□□□□□ -0.64
PRPF8-213ENST00000576407 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
PRPF8-213ENST00000576407 C5P01031 1676 aa11.04□□□□□ -0.64
PRPF8-213ENST00000576407 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
PRPF8-213ENST00000576407 ATP6V1AP38606 617 aa11.03□□□□□ -0.64
PRPF8-213ENST00000576407 KCNQ4P56696 695 aa11.03□□□□□ -0.64
PRPF8-213ENST00000576407 TWISTNBQ3B726 338 aaPredicted RBP11.03□□□□□ -0.64
PRPF8-213ENST00000576407 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
PRPF8-213ENST00000576407 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
PRPF8-213ENST00000576407 TJP1Q07157 1748 aa11.03□□□□□ -0.64
PRPF8-213ENST00000576407 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
PRPF8-213ENST00000576407 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
PRPF8-213ENST00000576407 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.64
PRPF8-213ENST00000576407 BAG6P46379 1132 aa11.02□□□□□ -0.65
PRPF8-213ENST00000576407 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
PRPF8-213ENST00000576407 ITPK1Q13572 414 aa11.02□□□□□ -0.65
PRPF8-213ENST00000576407 TXNRD1Q16881 649 aa11.02□□□□□ -0.65
PRPF8-213ENST00000576407 DNAJC10Q8IXB1 793 aa11.02□□□□□ -0.65
PRPF8-213ENST00000576407 PROM2Q8N271 834 aa11.02□□□□□ -0.65
PRPF8-213ENST00000576407 USP16Q9Y5T5 823 aa11.02□□□□□ -0.65
PRPF8-213ENST00000576407 LAMB4A4D0S4 1761 aa11.01□□□□□ -0.65
PRPF8-213ENST00000576407 VAMP4O75379 141 aa11.01□□□□□ -0.65
PRPF8-213ENST00000576407 HOXB7P09629 217 aa11.01□□□□□ -0.65
PRPF8-213ENST00000576407 SLC27A3Q5K4L6 730 aa11.01□□□□□ -0.65
PRPF8-213ENST00000576407 DEFB132Q7Z7B7 95 aa11.01□□□□□ -0.65
PRPF8-213ENST00000576407 CAMKK2Q96RR4 588 aa11.01□□□□□ -0.65
PRPF8-213ENST00000576407 TEX13AQ9BXU3 409 aaPredicted RBP11.01□□□□□ -0.65
PRPF8-213ENST00000576407 LRRC4BQ9NT99 713 aa11.01□□□□□ -0.65
PRPF8-213ENST00000576407 SOS1Q07889 1333 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms