RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 HTATSF1O43719 755 aaKnown RBP20.7■□□□□ 0.9
LITAF-218ENST00000576036 NEFMP07197 916 aa20.7■□□□□ 0.9
LITAF-218ENST00000576036 CAMKK2Q96RR4 588 aa20.7■□□□□ 0.9
LITAF-218ENST00000576036 TRIM35Q9UPQ4 493 aa20.7■□□□□ 0.9
LITAF-218ENST00000576036 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.9
LITAF-218ENST00000576036 CICQ96RK0 1608 aaPredicted RBP20.69■□□□□ 0.9
LITAF-218ENST00000576036 SENP3-EIF4A1A0A087X0R7 540 aa20.69■□□□□ 0.9
LITAF-218ENST00000576036 RIPK4P57078 832 aa20.69■□□□□ 0.9
LITAF-218ENST00000576036 EN1Q05925 392 aaPredicted RBP20.69■□□□□ 0.9
LITAF-218ENST00000576036 NFATC2IPQ8NCF5 419 aa20.69■□□□□ 0.9
LITAF-218ENST00000576036 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
LITAF-218ENST00000576036 TMOD3Q9NYL9 352 aa20.69■□□□□ 0.9
LITAF-218ENST00000576036 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
LITAF-218ENST00000576036 TJP1Q07157 1748 aa20.68■□□□□ 0.9
LITAF-218ENST00000576036 PLSCR1O15162 318 aa20.68■□□□□ 0.9
LITAF-218ENST00000576036 CABP4P57796 275 aa20.68■□□□□ 0.9
LITAF-218ENST00000576036 PROM2Q8N271 834 aa20.68■□□□□ 0.9
LITAF-218ENST00000576036 ATG3Q9NT62 314 aa20.68■□□□□ 0.9
LITAF-218ENST00000576036 ASAP1Q9ULH1 1129 aa20.68■□□□□ 0.9
LITAF-218ENST00000576036 EZH2Q15910 746 aaKnown RBP20.67■□□□□ 0.9
LITAF-218ENST00000576036 C5P01031 1676 aa20.67■□□□□ 0.9
LITAF-218ENST00000576036 COL5A3P25940 1745 aaPredicted RBP20.67■□□□□ 0.9
LITAF-218ENST00000576036 BAG6P46379 1132 aa20.66■□□□□ 0.9
LITAF-218ENST00000576036 SF3B2Q13435 895 aaKnown RBP20.66■□□□□ 0.9
LITAF-218ENST00000576036 NEUROD2Q15784 382 aa20.66■□□□□ 0.9
LITAF-218ENST00000576036 PALLDQ8WX93 1383 aa20.66■□□□□ 0.9
LITAF-218ENST00000576036 TUBGCP6Q96RT7 1819 aa20.64■□□□□ 0.9
LITAF-218ENST00000576036 RTF1Q92541 710 aaKnown RBP20.64■□□□□ 0.89
LITAF-218ENST00000576036 SLC39A6Q13433 755 aa20.63■□□□□ 0.89
LITAF-218ENST00000576036 TEFQ10587 303 aa20.62■□□□□ 0.89
LITAF-218ENST00000576036 TXNRD1Q16881 649 aa20.62■□□□□ 0.89
LITAF-218ENST00000576036 SLC4A9Q96Q91 983 aa20.62■□□□□ 0.89
LITAF-218ENST00000576036 LRRC4BQ9NT99 713 aa20.62■□□□□ 0.89
LITAF-218ENST00000576036 KCNQ3O43525 872 aa20.61■□□□□ 0.89
LITAF-218ENST00000576036 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
LITAF-218ENST00000576036 KCNQ4P56696 695 aa20.6■□□□□ 0.89
LITAF-218ENST00000576036 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
LITAF-218ENST00000576036 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
LITAF-218ENST00000576036 SMARCC1Q92922 1105 aaPredicted RBP20.59■□□□□ 0.89
LITAF-218ENST00000576036 CCDC27Q2M243 656 aa20.58■□□□□ 0.89
LITAF-218ENST00000576036 C4BP0C0L5 1744 aa20.58■□□□□ 0.88
LITAF-218ENST00000576036 LAMB4A4D0S4 1761 aa20.57■□□□□ 0.88
LITAF-218ENST00000576036 TAF7Q15545 349 aaPredicted RBP20.57■□□□□ 0.88
LITAF-218ENST00000576036 QSER1Q2KHR3 1735 aa20.57■□□□□ 0.88
LITAF-218ENST00000576036 UBR3Q6ZT12 1888 aa20.57■□□□□ 0.88
LITAF-218ENST00000576036 MIS18AQ9NYP9 233 aa20.57■□□□□ 0.88
LITAF-218ENST00000576036 LOC102724428A0A0B4J2F2 783 aa20.56■□□□□ 0.88
LITAF-218ENST00000576036 BTBD11A6QL63 1104 aa20.56■□□□□ 0.88
LITAF-218ENST00000576036 SIK1P57059 783 aa20.56■□□□□ 0.88
LITAF-218ENST00000576036 ITPK1Q13572 414 aa20.56■□□□□ 0.88
LITAF-218ENST00000576036 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
LITAF-218ENST00000576036 WWC1Q8IX03 1113 aa20.56■□□□□ 0.88
LITAF-218ENST00000576036 ZNF521Q96K83 1311 aa20.55■□□□□ 0.88
LITAF-218ENST00000576036 SLC27A3Q5K4L6 730 aa20.55■□□□□ 0.88
LITAF-218ENST00000576036 ZNF496Q96IT1 587 aaPredicted RBP20.55■□□□□ 0.88
LITAF-218ENST00000576036 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
LITAF-218ENST00000576036 CCNL1Q9UK58 526 aaPredicted RBP20.55■□□□□ 0.88
LITAF-218ENST00000576036 PTCD1O75127 700 aaKnown RBP20.54■□□□□ 0.88
LITAF-218ENST00000576036 ZNF853P0CG23 659 aa20.54■□□□□ 0.88
LITAF-218ENST00000576036 SALL2Q9Y467 1007 aaPredicted RBP20.54■□□□□ 0.88
LITAF-218ENST00000576036 RBM42Q9BTD8 480 aaKnown RBP20.53■□□□□ 0.88
LITAF-218ENST00000576036 HEG1Q9ULI3 1381 aa20.53■□□□□ 0.88
LITAF-218ENST00000576036 CHL1O00533 1208 aa20.52■□□□□ 0.88
LITAF-218ENST00000576036 LINC00116Q8NCU8 138 aa20.52■□□□□ 0.88
LITAF-218ENST00000576036 ZNF827Q17R98 1081 aa20.51■□□□□ 0.87
LITAF-218ENST00000576036 CASZ1Q86V15 1759 aa20.51■□□□□ 0.87
LITAF-218ENST00000576036 AKT1S1Q96B36 256 aa20.5■□□□□ 0.87
LITAF-218ENST00000576036 BABAM1Q9NWV8 329 aa20.5■□□□□ 0.87
LITAF-218ENST00000576036 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
LITAF-218ENST00000576036 EIF4A1P60842 406 aaKnown RBP20.49■□□□□ 0.87
LITAF-218ENST00000576036 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
LITAF-218ENST00000576036 TTC5Q8N0Z6 440 aa20.49■□□□□ 0.87
LITAF-218ENST00000576036 NGEFQ8N5V2 710 aa20.49■□□□□ 0.87
LITAF-218ENST00000576036 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
LITAF-218ENST00000576036 SPINK5Q9NQ38 1064 aaPredicted RBP20.49■□□□□ 0.87
LITAF-218ENST00000576036 PRAMEF22A3QJZ6 481 aa20.48■□□□□ 0.87
LITAF-218ENST00000576036 MBIPQ9NS73 344 aa20.48■□□□□ 0.87
LITAF-218ENST00000576036 IFT57Q9NWB7 429 aa20.48■□□□□ 0.87
LITAF-218ENST00000576036 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
LITAF-218ENST00000576036 IL16Q14005 1332 aa20.48■□□□□ 0.87
LITAF-218ENST00000576036 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
LITAF-218ENST00000576036 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
LITAF-218ENST00000576036 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
LITAF-218ENST00000576036 FMNL2Q96PY5 1086 aa20.47■□□□□ 0.87
LITAF-218ENST00000576036 LAS1LQ9Y4W2 734 aaKnown RBP20.47■□□□□ 0.87
LITAF-218ENST00000576036 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
LITAF-218ENST00000576036 WDR63Q8IWG1 891 aa20.46■□□□□ 0.87
LITAF-218ENST00000576036 CYP19A1P11511 503 aaPredicted RBP20.45■□□□□ 0.86
LITAF-218ENST00000576036 GNAI1P63096 354 aa20.44■□□□□ 0.86
LITAF-218ENST00000576036 CALD1Q05682 793 aaKnown RBP20.44■□□□□ 0.86
LITAF-218ENST00000576036 CNTNAP4Q9C0A0 1308 aa20.44■□□□□ 0.86
LITAF-218ENST00000576036 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
LITAF-218ENST00000576036 SLC15A2Q16348 729 aa20.43■□□□□ 0.86
LITAF-218ENST00000576036 SMIM5Q71RC9 77 aa20.43■□□□□ 0.86
LITAF-218ENST00000576036 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
LITAF-218ENST00000576036 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
LITAF-218ENST00000576036 INTS5Q6P9B9 1019 aaKnown RBP20.42■□□□□ 0.86
LITAF-218ENST00000576036 COL24A1Q17RW2 1714 aa20.41■□□□□ 0.86
LITAF-218ENST00000576036 SNRPA1P09661 255 aaKnown RBP20.41■□□□□ 0.86
LITAF-218ENST00000576036 CRKLP46109 303 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms