RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 ATMINO43313 823 aaPredicted RBP8.05□□□□□ -1.12
CHD9-217ENST00000565832 CLCN6P51797 869 aa8.05□□□□□ -1.12
CHD9-217ENST00000565832 TSPYL6Q8N831 410 aa8.05□□□□□ -1.12
CHD9-217ENST00000565832 IP6K1Q92551 441 aa8.05□□□□□ -1.12
CHD9-217ENST00000565832 IRX5P78411 483 aaPredicted RBP8.05□□□□□ -1.12
CHD9-217ENST00000565832 ARHGEF25Q86VW2 580 aa8.05□□□□□ -1.12
CHD9-217ENST00000565832 PANK1Q8TE04 598 aa8.05□□□□□ -1.12
CHD9-217ENST00000565832 CLUAP1Q96AJ1 413 aa8.05□□□□□ -1.12
CHD9-217ENST00000565832 IGSF1Q8N6C5 1336 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 CHRNA2Q15822 529 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 KRT24Q2M2I5 525 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 SMYD5Q6GMV2 418 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 ASTLQ6HA08 431 aaPredicted RBP8.04□□□□□ -1.12
CHD9-217ENST00000565832 SKAP1Q86WV1 359 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 KCNH5Q8NCM2 988 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 MBIPQ9NS73 344 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 EMILIN3Q9NT22 766 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 LTN1O94822 1766 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 RLBP1P12271 317 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 SSH1Q8WYL5 1049 aa8.04□□□□□ -1.12
CHD9-217ENST00000565832 DPYSL4O14531 572 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 MLLT3P42568 568 aaPredicted RBP8.03□□□□□ -1.12
CHD9-217ENST00000565832 C8orf58Q8NAV2 365 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 OCEL1Q9H607 264 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 RGPD1P0DJD0 1748 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 NFAT5O94916 1531 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 RGPD2P0DJD1 1756 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 ZNF853P0CG23 659 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 CANXP27824 592 aaKnown RBP8.03□□□□□ -1.12
CHD9-217ENST00000565832 TMC2Q8TDI7 906 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
CHD9-217ENST00000565832 TRPM3Q9HCF6 1732 aaPredicted RBP8.02□□□□□ -1.12
CHD9-217ENST00000565832 IL16Q14005 1332 aa8.02□□□□□ -1.13
CHD9-217ENST00000565832 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.13
CHD9-217ENST00000565832 NCOA3Q9Y6Q9 1424 aa8.02□□□□□ -1.13
CHD9-217ENST00000565832 ANKRD24Q8TF21 1146 aa8.02□□□□□ -1.13
CHD9-217ENST00000565832 SLC24A3Q9HC58 644 aa8.02□□□□□ -1.13
CHD9-217ENST00000565832 KDRP35968 1356 aa8.02□□□□□ -1.13
CHD9-217ENST00000565832 VAMP4O75379 141 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 FOXK1P85037 733 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 IER5LQ5T953 404 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 TMEM121BQ9BXQ6 578 aaPredicted RBP8.01□□□□□ -1.13
CHD9-217ENST00000565832 BOLA1Q9Y3E2 137 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 RGPD5Q99666 1765 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 ARHGEF10O15013 1369 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 USP19O94966 1318 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 SPATA31A3Q5VYP0 1347 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 DCCP43146 1447 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.01□□□□□ -1.13
CHD9-217ENST00000565832 IL17REQ8NFR9 667 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 SMC4Q9NTJ3 1288 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 IFT57Q9NWB7 429 aa8.01□□□□□ -1.13
CHD9-217ENST00000565832 NOB1Q9ULX3 412 aaKnown RBP8.01□□□□□ -1.13
CHD9-217ENST00000565832 MED1Q15648 1581 aaPredicted RBP8.01□□□□□ -1.13
CHD9-217ENST00000565832 BRPF1P55201 1214 aaPredicted RBP8□□□□□ -1.13
CHD9-217ENST00000565832 GNAI1P63096 354 aa8□□□□□ -1.13
CHD9-217ENST00000565832 RBM26Q5T8P6 1007 aaKnown RBP8□□□□□ -1.13
CHD9-217ENST00000565832 LGR6Q9HBX8 967 aa8□□□□□ -1.13
CHD9-217ENST00000565832 USP54Q70EL1 1684 aa8□□□□□ -1.13
CHD9-217ENST00000565832 PXDNQ92626 1479 aa8□□□□□ -1.13
CHD9-217ENST00000565832 C2orf72A6NCS6 295 aa8□□□□□ -1.13
CHD9-217ENST00000565832 CHL1O00533 1208 aa8□□□□□ -1.13
CHD9-217ENST00000565832 ZMYND10O75800 440 aa8□□□□□ -1.13
CHD9-217ENST00000565832 RTF1Q92541 710 aaKnown RBP8□□□□□ -1.13
CHD9-217ENST00000565832 ALS2Q96Q42 1657 aa7.99□□□□□ -1.13
CHD9-217ENST00000565832 KIF24Q5T7B8 1368 aa7.99□□□□□ -1.13
CHD9-217ENST00000565832 LMOD3Q0VAK6 560 aa7.99□□□□□ -1.13
CHD9-217ENST00000565832 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
CHD9-217ENST00000565832 TWISTNBQ3B726 338 aaPredicted RBP7.99□□□□□ -1.13
CHD9-217ENST00000565832 KIF1AQ12756 1690 aa7.99□□□□□ -1.13
CHD9-217ENST00000565832 KIAA0232Q92628 1395 aa7.99□□□□□ -1.13
CHD9-217ENST00000565832 GNAT3A8MTJ3 354 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 TRIM27P14373 513 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 PLPP6Q8IY26 295 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 NLRP2Q9NX02 1062 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 RTL1A6NKG5 1358 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 SLIT3O75094 1523 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 PLCG2P16885 1265 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 CALD1Q05682 793 aaKnown RBP7.98□□□□□ -1.13
CHD9-217ENST00000565832 PDE3AQ14432 1141 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 PDIA6Q15084 440 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 GAS2L2Q8NHY3 880 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 CRB1P82279 1406 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 ERBB3P21860 1342 aa7.98□□□□□ -1.13
CHD9-217ENST00000565832 SOS2Q07890 1332 aaPredicted RBP7.98□□□□□ -1.13
CHD9-217ENST00000565832 G3V3G9 751 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 KIF3CO14782 793 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 IGHDP01880 384 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 ZKSCAN2Q63HK3 967 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 TNS3Q68CZ2 1445 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 GABBR2O75899 941 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 CSB-PGBD3P0DP91 1061 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 PELP1Q8IZL8 1130 aaKnown RBP7.97□□□□□ -1.13
CHD9-217ENST00000565832 NECTIN2Q92692 538 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 TSPYL4Q9UJ04 414 aa7.97□□□□□ -1.13
CHD9-217ENST00000565832 CT47B1P0C2W7 299 aaPredicted RBP7.96□□□□□ -1.14
CHD9-217ENST00000565832 ATF7IPQ6VMQ6 1270 aa7.96□□□□□ -1.14
CHD9-217ENST00000565832 DZIP1LQ8IYY4 767 aaKnown RBP7.96□□□□□ -1.14
CHD9-217ENST00000565832 MRPL50Q8N5N7 158 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms