RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KRT24Q2M2I5 525 aa19.81■□□□□ 0.76
LINC00554-201ENST00000564841 TBX22Q9Y458 520 aa19.81■□□□□ 0.76
LINC00554-201ENST00000564841 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
LINC00554-201ENST00000564841 FER1L4A9Z1Z3 1794 aa19.8■□□□□ 0.76
LINC00554-201ENST00000564841 PIBF1Q8WXW3 757 aa19.8■□□□□ 0.76
LINC00554-201ENST00000564841 GTPBP4Q9BZE4 634 aaKnown RBP19.8■□□□□ 0.76
LINC00554-201ENST00000564841 CHMP4BQ9H444 224 aaKnown RBP19.8■□□□□ 0.76
LINC00554-201ENST00000564841 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
LINC00554-201ENST00000564841 GCC1Q96CN9 775 aa19.79■□□□□ 0.76
LINC00554-201ENST00000564841 USP32Q8NFA0 1604 aa19.79■□□□□ 0.76
LINC00554-201ENST00000564841 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
LINC00554-201ENST00000564841 CGNQ9P2M7 1197 aaKnown RBP19.79■□□□□ 0.76
LINC00554-201ENST00000564841 ATP7BP35670 1465 aa19.79■□□□□ 0.76
LINC00554-201ENST00000564841 CT47B1P0C2W7 299 aaPredicted RBP19.78■□□□□ 0.76
LINC00554-201ENST00000564841 PDCL2Q8N4E4 241 aa19.78■□□□□ 0.76
LINC00554-201ENST00000564841 CPSF1Q10570 1443 aaKnown RBP19.78■□□□□ 0.76
LINC00554-201ENST00000564841 LTV1Q96GA3 475 aaPredicted RBP19.78■□□□□ 0.76
LINC00554-201ENST00000564841 SULT6B1Q6IMI4 303 aa19.78■□□□□ 0.76
LINC00554-201ENST00000564841 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
LINC00554-201ENST00000564841 FCHSD2O94868 740 aa19.77■□□□□ 0.76
LINC00554-201ENST00000564841 ADCY5O95622 1261 aa19.77■□□□□ 0.76
LINC00554-201ENST00000564841 TMEM51Q9NW97 253 aa19.77■□□□□ 0.76
LINC00554-201ENST00000564841 SIRT1Q96EB6 747 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 PRIMPOLQ96LW4 560 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 DTNBO60941 627 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 KIF20AO95235 890 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 IL13P35225 146 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 NLRP6P59044 892 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 LMOD2Q6P5Q4 547 aa19.76■□□□□ 0.75
LINC00554-201ENST00000564841 CWC22Q9HCG8 908 aaKnown RBP19.76■□□□□ 0.75
LINC00554-201ENST00000564841 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
LINC00554-201ENST00000564841 HMGN5P82970 282 aaKnown RBP19.76■□□□□ 0.75
LINC00554-201ENST00000564841 RIOK3O14730 519 aaKnown RBP19.75■□□□□ 0.75
LINC00554-201ENST00000564841 ST18O60284 1047 aa19.75■□□□□ 0.75
LINC00554-201ENST00000564841 C8orf58Q8NAV2 365 aa19.75■□□□□ 0.75
LINC00554-201ENST00000564841 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.75■□□□□ 0.75
LINC00554-201ENST00000564841 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
LINC00554-201ENST00000564841 TECPR2O15040 1411 aa19.74■□□□□ 0.75
LINC00554-201ENST00000564841 LETM1O95202 739 aaPredicted RBP19.74■□□□□ 0.75
LINC00554-201ENST00000564841 SDSP20132 328 aa19.74■□□□□ 0.75
LINC00554-201ENST00000564841 GTF2F1P35269 517 aaKnown RBP eCLIP19.74■□□□□ 0.75
LINC00554-201ENST00000564841 NEK4P51957 841 aa19.74■□□□□ 0.75
LINC00554-201ENST00000564841 COL3A1P02461 1466 aaPredicted RBP19.74■□□□□ 0.75
LINC00554-201ENST00000564841 TTC22Q5TAA0 569 aa19.73■□□□□ 0.75
LINC00554-201ENST00000564841 TMX3Q96JJ7 454 aa19.73■□□□□ 0.75
LINC00554-201ENST00000564841 MBIPQ9NS73 344 aa19.73■□□□□ 0.75
LINC00554-201ENST00000564841 PYCARDQ9ULZ3 195 aa19.73■□□□□ 0.75
LINC00554-201ENST00000564841 VAMP4O75379 141 aa19.72■□□□□ 0.75
LINC00554-201ENST00000564841 AMPHP49418 695 aa19.72■□□□□ 0.75
LINC00554-201ENST00000564841 EIF4A2Q14240 407 aaKnown RBP19.72■□□□□ 0.75
LINC00554-201ENST00000564841 NAA30Q147X3 362 aaPredicted RBP19.72■□□□□ 0.75
LINC00554-201ENST00000564841 ZNF771Q7L3S4 317 aaPredicted RBP19.72■□□□□ 0.75
LINC00554-201ENST00000564841 MIS18AQ9NYP9 233 aa19.72■□□□□ 0.75
LINC00554-201ENST00000564841 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 FKBP5Q13451 457 aaPredicted RBP19.71■□□□□ 0.75
LINC00554-201ENST00000564841 ABTB2Q8N961 1025 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 SPC24Q8NBT2 197 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 MBD3O95983 291 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 NAP1L2Q9ULW6 460 aaPredicted RBP19.71■□□□□ 0.75
LINC00554-201ENST00000564841 KIF20BQ96Q89 1820 aa19.71■□□□□ 0.75
LINC00554-201ENST00000564841 RIMS1Q86UR5 1692 aaKnown RBP19.7■□□□□ 0.74
LINC00554-201ENST00000564841 NFE2L2Q16236 605 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 ESCO1Q5FWF5 840 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 PLCD3Q8N3E9 789 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 AP5Z1O43299 807 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 USP48Q86UV5 1035 aa19.7■□□□□ 0.74
LINC00554-201ENST00000564841 INTS3Q68E01 1043 aaKnown RBP19.69■□□□□ 0.74
LINC00554-201ENST00000564841 TWISTNBQ3B726 338 aaPredicted RBP19.69■□□□□ 0.74
LINC00554-201ENST00000564841 TSHZ3Q63HK5 1081 aa19.69■□□□□ 0.74
LINC00554-201ENST00000564841 MRPL50Q8N5N7 158 aaKnown RBP19.69■□□□□ 0.74
LINC00554-201ENST00000564841 MED14O60244 1454 aa19.69■□□□□ 0.74
LINC00554-201ENST00000564841 BRD1O95696 1058 aa19.68■□□□□ 0.74
LINC00554-201ENST00000564841 MCM10Q7L590 875 aa19.68■□□□□ 0.74
LINC00554-201ENST00000564841 KCNF1Q9H3M0 494 aa19.68■□□□□ 0.74
LINC00554-201ENST00000564841 CDC42BPGQ6DT37 1551 aa19.68■□□□□ 0.74
LINC00554-201ENST00000564841 MAP3K19Q56UN5 1328 aa19.67■□□□□ 0.74
LINC00554-201ENST00000564841 LRRC7Q96NW7 1537 aa19.67■□□□□ 0.74
LINC00554-201ENST00000564841 USP6P35125 1406 aa19.67■□□□□ 0.74
LINC00554-201ENST00000564841 ALDH1L2Q3SY69 923 aa19.66■□□□□ 0.74
LINC00554-201ENST00000564841 PALD1Q9ULE6 856 aa19.66■□□□□ 0.74
LINC00554-201ENST00000564841 FOXO3O43524 673 aa19.66■□□□□ 0.74
LINC00554-201ENST00000564841 SPTLC3Q9NUV7 552 aa19.66■□□□□ 0.74
LINC00554-201ENST00000564841 UPF3BQ9BZI7 483 aaKnown RBP19.65■□□□□ 0.74
LINC00554-201ENST00000564841 ARHGAP23Q9P227 1491 aa19.65■□□□□ 0.74
LINC00554-201ENST00000564841 LARP6Q9BRS8 491 aaKnown RBP19.64■□□□□ 0.73
LINC00554-201ENST00000564841 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
LINC00554-201ENST00000564841 PSME1Q06323 249 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 NECTIN2Q92692 538 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 ANKRD26Q9UPS8 1709 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 SLIT1O75093 1534 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 GIMAP6Q6P9H5 292 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 ANKRD7Q92527 254 aa19.63■□□□□ 0.73
LINC00554-201ENST00000564841 RGPD8O14715 1765 aaPredicted RBP19.63■□□□□ 0.73
LINC00554-201ENST00000564841 KIAA1524Q8TCG1 905 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 DNAJC5Q9H3Z4 198 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 DCTPP1Q9H773 170 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 CNPY2Q9Y2B0 182 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 ORAI2Q96SN7 254 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 PHF8Q9UPP1 1060 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms