RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 TFCP2L1Q9NZI6 479 aa21.55■■□□□ 1.04
COMMD4-206ENST00000562610 MAP3K5Q99683 1374 aa21.55■■□□□ 1.04
COMMD4-206ENST00000562610 TJP1Q07157 1748 aa21.55■■□□□ 1.04
COMMD4-206ENST00000562610 LOC102724428A0A0B4J2F2 783 aa21.54■■□□□ 1.04
COMMD4-206ENST00000562610 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
COMMD4-206ENST00000562610 SIK1P57059 783 aa21.54■■□□□ 1.04
COMMD4-206ENST00000562610 GAS2L2Q8NHY3 880 aa21.54■■□□□ 1.04
COMMD4-206ENST00000562610 SPON1Q9HCB6 807 aa21.54■■□□□ 1.04
COMMD4-206ENST00000562610 ATG3Q9NT62 314 aa21.54■■□□□ 1.04
COMMD4-206ENST00000562610 MYBBP1AQ9BQG0 1328 aaKnown RBP21.54■■□□□ 1.04
COMMD4-206ENST00000562610 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
COMMD4-206ENST00000562610 NFATC2IPQ8NCF5 419 aa21.53■■□□□ 1.04
COMMD4-206ENST00000562610 CICQ96RK0 1608 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-206ENST00000562610 RNMTO43148 476 aaKnown RBP21.52■■□□□ 1.04
COMMD4-206ENST00000562610 RBM42Q9BTD8 480 aaKnown RBP21.52■■□□□ 1.04
COMMD4-206ENST00000562610 LGR6Q9HBX8 967 aa21.52■■□□□ 1.04
COMMD4-206ENST00000562610 PNPLA7Q6ZV29 1317 aa21.52■■□□□ 1.03
COMMD4-206ENST00000562610 HMGB2P26583 209 aaKnown RBP21.51■■□□□ 1.03
COMMD4-206ENST00000562610 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
COMMD4-206ENST00000562610 PHACTR3Q96KR7 559 aa21.51■■□□□ 1.03
COMMD4-206ENST00000562610 COL24A1Q17RW2 1714 aa21.51■■□□□ 1.03
COMMD4-206ENST00000562610 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
COMMD4-206ENST00000562610 FCHSD2O94868 740 aa21.5■■□□□ 1.03
COMMD4-206ENST00000562610 AK7Q96M32 723 aa21.5■■□□□ 1.03
COMMD4-206ENST00000562610 SLC52A2Q9HAB3 445 aa21.5■■□□□ 1.03
COMMD4-206ENST00000562610 GNAT3A8MTJ3 354 aa21.49■■□□□ 1.03
COMMD4-206ENST00000562610 PPP1R1BQ9UD71 204 aaPredicted RBP21.49■■□□□ 1.03
COMMD4-206ENST00000562610 ATF5Q9Y2D1 282 aaPredicted RBP21.49■■□□□ 1.03
COMMD4-206ENST00000562610 ITPK1Q13572 414 aa21.48■■□□□ 1.03
COMMD4-206ENST00000562610 LINC00116Q8NCU8 138 aa21.48■■□□□ 1.03
COMMD4-206ENST00000562610 MTFR1LQ9H019 292 aa21.48■■□□□ 1.03
COMMD4-206ENST00000562610 MYH14Q7Z406 1995 aaKnown RBP21.48■■□□□ 1.03
COMMD4-206ENST00000562610 MSH5O43196 834 aa21.47■■□□□ 1.03
COMMD4-206ENST00000562610 NEFMP07197 916 aa21.47■■□□□ 1.03
COMMD4-206ENST00000562610 C4AP0C0L4 1744 aa21.46■■□□□ 1.03
COMMD4-206ENST00000562610 PTCD1O75127 700 aaKnown RBP21.46■■□□□ 1.03
COMMD4-206ENST00000562610 PRKRIP1Q9H875 184 aaPredicted RBP21.46■■□□□ 1.03
COMMD4-206ENST00000562610 KCPQ6ZWJ8 1503 aa21.45■■□□□ 1.02
COMMD4-206ENST00000562610 TEFQ10587 303 aa21.45■■□□□ 1.02
COMMD4-206ENST00000562610 PHF14O94880 888 aa21.44■■□□□ 1.02
COMMD4-206ENST00000562610 SLC4A9Q96Q91 983 aa21.44■■□□□ 1.02
COMMD4-206ENST00000562610 GNPATO15228 680 aa21.42■■□□□ 1.02
COMMD4-206ENST00000562610 PTGER2P43116 358 aa21.42■■□□□ 1.02
COMMD4-206ENST00000562610 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
COMMD4-206ENST00000562610 COL23A1Q86Y22 540 aaPredicted RBP21.42■■□□□ 1.02
COMMD4-206ENST00000562610 IL17REQ8NFR9 667 aa21.42■■□□□ 1.02
COMMD4-206ENST00000562610 SLC16A10Q8TF71 515 aa21.42■■□□□ 1.02
COMMD4-206ENST00000562610 RTF1Q92541 710 aaKnown RBP21.42■■□□□ 1.02
COMMD4-206ENST00000562610 MAPK8IP3Q9UPT6 1336 aa21.42■■□□□ 1.02
COMMD4-206ENST00000562610 CEMIPQ8WUJ3 1361 aa21.41■■□□□ 1.02
COMMD4-206ENST00000562610 FLAD1Q8NFF5 587 aa21.41■■□□□ 1.02
COMMD4-206ENST00000562610 PNNQ9H307 717 aaKnown RBP21.4■■□□□ 1.02
COMMD4-206ENST00000562610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.39■■□□□ 1.01
COMMD4-206ENST00000562610 SMIM5Q71RC9 77 aa21.39■■□□□ 1.01
COMMD4-206ENST00000562610 AMIGO3Q86WK7 504 aa21.39■■□□□ 1.01
COMMD4-206ENST00000562610 TTC5Q8N0Z6 440 aa21.39■■□□□ 1.01
COMMD4-206ENST00000562610 CNTNAP4Q9C0A0 1308 aa21.38■■□□□ 1.01
COMMD4-206ENST00000562610 SSFA2P28290 1259 aa21.38■■□□□ 1.01
COMMD4-206ENST00000562610 WDR43Q15061 677 aaKnown RBP eCLIP21.38■■□□□ 1.01
COMMD4-206ENST00000562610 MCM10Q7L590 875 aa21.38■■□□□ 1.01
COMMD4-206ENST00000562610 PLEKHF1Q96S99 279 aa21.38■■□□□ 1.01
COMMD4-206ENST00000562610 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
COMMD4-206ENST00000562610 POLD1P28340 1107 aa21.37■■□□□ 1.01
COMMD4-206ENST00000562610 MSL1Q68DK7 614 aa21.37■■□□□ 1.01
COMMD4-206ENST00000562610 SGIP1Q9BQI5 828 aa21.37■■□□□ 1.01
COMMD4-206ENST00000562610 DCTN1Q14203 1278 aa21.36■■□□□ 1.01
COMMD4-206ENST00000562610 RTCBQ9Y3I0 505 aaKnown RBP21.36■■□□□ 1.01
COMMD4-206ENST00000562610 NFE2L2Q16236 605 aa21.35■■□□□ 1.01
COMMD4-206ENST00000562610 LAMB4A4D0S4 1761 aa21.35■■□□□ 1.01
COMMD4-206ENST00000562610 BTBD11A6QL63 1104 aa21.34■■□□□ 1.01
COMMD4-206ENST00000562610 HTATSF1O43719 755 aaKnown RBP21.34■■□□□ 1.01
COMMD4-206ENST00000562610 CRKLP46109 303 aaKnown RBP21.34■■□□□ 1.01
COMMD4-206ENST00000562610 RC3H1Q5TC82 1133 aaKnown RBP21.34■■□□□ 1.01
COMMD4-206ENST00000562610 ZNF790Q6PG37 636 aa21.34■■□□□ 1.01
COMMD4-206ENST00000562610 DNAJC10Q8IXB1 793 aa21.34■■□□□ 1.01
COMMD4-206ENST00000562610 ARXQ96QS3 562 aa21.34■■□□□ 1.01
COMMD4-206ENST00000562610 CCDC146Q8IYE0 955 aa21.32■■□□□ 1
COMMD4-206ENST00000562610 KLHL34Q8N239 644 aa21.32■■□□□ 1
COMMD4-206ENST00000562610 ZNF496Q96IT1 587 aaPredicted RBP21.31■■□□□ 1
COMMD4-206ENST00000562610 FHDC1Q9C0D6 1143 aaPredicted RBP21.31■■□□□ 1
COMMD4-206ENST00000562610 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
COMMD4-206ENST00000562610 RPS6KA4O75676 772 aa21.3■■□□□ 1
COMMD4-206ENST00000562610 TRAPPC3LQ5T215 181 aa21.3■■□□□ 1
COMMD4-206ENST00000562610 VSIG10Q8N0Z9 540 aa21.3■■□□□ 1
COMMD4-206ENST00000562610 CCDC87Q9NVE4 849 aa21.3■■□□□ 1
COMMD4-206ENST00000562610 ANP32CO43423 234 aa21.29■■□□□ 1
COMMD4-206ENST00000562610 ADRA2BP18089 450 aa21.29■■□□□ 1
COMMD4-206ENST00000562610 FMNL2Q96PY5 1086 aa21.29■■□□□ 1
COMMD4-206ENST00000562610 CYP19A1P11511 503 aaPredicted RBP21.28■■□□□ 1
COMMD4-206ENST00000562610 KCNQ3O43525 872 aa21.27■■□□□ 1
COMMD4-206ENST00000562610 RFC4P35249 363 aa21.27■■□□□ 1
COMMD4-206ENST00000562610 INTS5Q6P9B9 1019 aaKnown RBP21.27■■□□□ 1
COMMD4-206ENST00000562610 ARHGEF1Q92888 912 aaKnown RBP21.27■■□□□ 1
COMMD4-206ENST00000562610 THUMPD2Q9BTF0 503 aaKnown RBP21.27■■□□□ 1
COMMD4-206ENST00000562610 ADAMTS8Q9UP79 889 aa21.27■■□□□ 1
COMMD4-206ENST00000562610 SCN7AQ01118 1682 aa21.26■□□□□ 0.99
COMMD4-206ENST00000562610 RIPK4P57078 832 aa21.26■□□□□ 0.99
COMMD4-206ENST00000562610 TAF7Q15545 349 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-206ENST00000562610 RUNDC1Q96C34 613 aa21.26■□□□□ 0.99
COMMD4-206ENST00000562610 RRP7AQ9Y3A4 280 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms