RNA–Protein interactions for RNA: ENST00000560262.5

NEO1-207, Transcript of neogenin 1, humanhuman

TSL 1 (best) BASIC

Gene NEO1, Length 4,315 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-207ENST00000560262 MEIS3Q99687 375 aa19.31■□□□□ 0.68
NEO1-207ENST00000560262 RNF214Q8ND24 703 aa19.3■□□□□ 0.68
NEO1-207ENST00000560262 ARID3AQ99856 593 aa19.3■□□□□ 0.68
NEO1-207ENST00000560262 NACAP1Q9BZK3 213 aa19.3■□□□□ 0.68
NEO1-207ENST00000560262 TRMT112Q9UI30 125 aaKnown RBP19.3■□□□□ 0.68
NEO1-207ENST00000560262 ABCC1P33527 1531 aa19.3■□□□□ 0.68
NEO1-207ENST00000560262 TSPYL6Q8N831 410 aa19.3■□□□□ 0.68
NEO1-207ENST00000560262 JARID2Q92833 1246 aaPredicted RBP19.3■□□□□ 0.68
NEO1-207ENST00000560262 COL17A1Q9UMD9 1497 aaPredicted RBP19.3■□□□□ 0.68
NEO1-207ENST00000560262 CAVIN1Q6NZI2 390 aaKnown RBP19.3■□□□□ 0.68
NEO1-207ENST00000560262 TNNQ9UQP3 1299 aa19.29■□□□□ 0.68
NEO1-207ENST00000560262 SASS6Q6UVJ0 657 aa19.29■□□□□ 0.68
NEO1-207ENST00000560262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.29■□□□□ 0.68
NEO1-207ENST00000560262 SNRPA1P09661 255 aaKnown RBP19.29■□□□□ 0.68
NEO1-207ENST00000560262 SF3B2Q13435 895 aaKnown RBP19.29■□□□□ 0.68
NEO1-207ENST00000560262 LRP2BPQ9P2M1 347 aa19.29■□□□□ 0.68
NEO1-207ENST00000560262 IFIT5Q13325 482 aaKnown RBP19.29■□□□□ 0.68
NEO1-207ENST00000560262 PPP1R42Q7Z4L9 355 aa19.29■□□□□ 0.68
NEO1-207ENST00000560262 CHPF2Q9P2E5 772 aa19.29■□□□□ 0.68
NEO1-207ENST00000560262 CEBPZQ03701 1054 aaKnown RBP19.28■□□□□ 0.68
NEO1-207ENST00000560262 MAST1Q9Y2H9 1570 aa19.28■□□□□ 0.68
NEO1-207ENST00000560262 XBP1P17861 261 aa19.28■□□□□ 0.68
NEO1-207ENST00000560262 ZNF652Q9Y2D9 606 aa19.28■□□□□ 0.68
NEO1-207ENST00000560262 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
NEO1-207ENST00000560262 ZCRB1Q8TBF4 217 aaKnown RBP19.27■□□□□ 0.68
NEO1-207ENST00000560262 ORAI2Q96SN7 254 aa19.27■□□□□ 0.68
NEO1-207ENST00000560262 RAI14Q9P0K7 980 aa19.27■□□□□ 0.68
NEO1-207ENST00000560262 PIK3R4Q99570 1358 aa19.27■□□□□ 0.68
NEO1-207ENST00000560262 YEATS2Q9ULM3 1422 aa19.27■□□□□ 0.68
NEO1-207ENST00000560262 IKQ13123 557 aaPredicted RBP19.27■□□□□ 0.67
NEO1-207ENST00000560262 TSHZ3Q63HK5 1081 aa19.27■□□□□ 0.67
NEO1-207ENST00000560262 ZSCAN25Q6NSZ9 544 aa19.27■□□□□ 0.67
NEO1-207ENST00000560262 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.67
NEO1-207ENST00000560262 ANKRD13DQ6ZTN6 518 aa19.26■□□□□ 0.67
NEO1-207ENST00000560262 ZPR1O75312 459 aa19.26■□□□□ 0.67
NEO1-207ENST00000560262 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
NEO1-207ENST00000560262 ANKRD1Q15327 319 aa19.25■□□□□ 0.67
NEO1-207ENST00000560262 HOOK1Q9UJC3 728 aaKnown RBP19.25■□□□□ 0.67
NEO1-207ENST00000560262 VAMP4O75379 141 aa19.25■□□□□ 0.67
NEO1-207ENST00000560262 IFIT1P09914 478 aaKnown RBP19.25■□□□□ 0.67
NEO1-207ENST00000560262 RLBP1P12271 317 aa19.25■□□□□ 0.67
NEO1-207ENST00000560262 PIP4K2AP48426 406 aaPredicted RBP19.25■□□□□ 0.67
NEO1-207ENST00000560262 TCEAL9Q9UHQ7 104 aa19.25■□□□□ 0.67
NEO1-207ENST00000560262 TDO2P48775 406 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
NEO1-207ENST00000560262 LARP1BQ659C4 914 aaKnown RBP19.24■□□□□ 0.67
NEO1-207ENST00000560262 COPS6Q7L5N1 327 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 CWC22Q9HCG8 908 aaKnown RBP19.24■□□□□ 0.67
NEO1-207ENST00000560262 BRMS1Q9HCU9 246 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 PDRG1Q9NUG6 133 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 AKAP4Q5JQC9 854 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 MBD3O95983 291 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 LTKP29376 864 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 AKAP2Q9Y2D5 859 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 TPM3P06753 285 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 XAGE3Q8WTP9 111 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 CTNNA3Q9UI47 895 aa19.24■□□□□ 0.67
NEO1-207ENST00000560262 NEO1Q92859 1461 aa19.23■□□□□ 0.67
NEO1-207ENST00000560262 UBAP1LF5GYI3 381 aa19.23■□□□□ 0.67
NEO1-207ENST00000560262 HSP90AB3PQ58FF7 597 aa19.23■□□□□ 0.67
NEO1-207ENST00000560262 ABCA8O94911 1581 aa19.23■□□□□ 0.67
NEO1-207ENST00000560262 CASTP20810 708 aaKnown RBP19.23■□□□□ 0.67
NEO1-207ENST00000560262 TSR1Q2NL82 804 aaKnown RBP19.23■□□□□ 0.67
NEO1-207ENST00000560262 ATP2B2Q01814 1243 aa19.23■□□□□ 0.67
NEO1-207ENST00000560262 PRPF40BQ6NWY9 871 aaKnown RBP19.23■□□□□ 0.67
NEO1-207ENST00000560262 NFATC2IPQ8NCF5 419 aa19.23■□□□□ 0.67
NEO1-207ENST00000560262 CCDC47Q96A33 483 aaKnown RBP19.23■□□□□ 0.67
NEO1-207ENST00000560262 RSPH6AQ9H0K4 717 aa19.23■□□□□ 0.67
NEO1-207ENST00000560262 HOXC9P31274 260 aa19.22■□□□□ 0.67
NEO1-207ENST00000560262 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
NEO1-207ENST00000560262 ECHDC1Q9NTX5 307 aa19.22■□□□□ 0.67
NEO1-207ENST00000560262 NUP133Q8WUM0 1156 aa19.21■□□□□ 0.67
NEO1-207ENST00000560262 AIDAQ96BJ3 306 aa19.21■□□□□ 0.67
NEO1-207ENST00000560262 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.67
NEO1-207ENST00000560262 WDR33Q9C0J8 1336 aaKnown RBP19.21■□□□□ 0.67
NEO1-207ENST00000560262 KRT32Q14532 448 aa19.21■□□□□ 0.67
NEO1-207ENST00000560262 LDHAL6AQ6ZMR3 332 aa19.21■□□□□ 0.67
NEO1-207ENST00000560262 TPM1P09493 284 aa19.21■□□□□ 0.67
NEO1-207ENST00000560262 CWC25Q9NXE8 425 aaPredicted RBP19.21■□□□□ 0.67
NEO1-207ENST00000560262 STK38Q15208 465 aa19.2■□□□□ 0.66
NEO1-207ENST00000560262 TOM1O60784 492 aa19.2■□□□□ 0.66
NEO1-207ENST00000560262 KINO60870 393 aaKnown RBP19.2■□□□□ 0.66
NEO1-207ENST00000560262 BMP2KLQ5H9B9 411 aa19.2■□□□□ 0.66
NEO1-207ENST00000560262 IP6K1Q92551 441 aa19.2■□□□□ 0.66
NEO1-207ENST00000560262 TRIM22Q8IYM9 498 aa19.19■□□□□ 0.66
NEO1-207ENST00000560262 TBC1D9Q6ZT07 1266 aa19.19■□□□□ 0.66
NEO1-207ENST00000560262 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
NEO1-207ENST00000560262 TRPM2O94759 1503 aa19.19■□□□□ 0.66
NEO1-207ENST00000560262 NASPP49321 788 aaPredicted RBP19.19■□□□□ 0.66
NEO1-207ENST00000560262 HDAC1Q13547 482 aaPredicted RBP19.19■□□□□ 0.66
NEO1-207ENST00000560262 ANKRD20A12PQ8NF67 263 aa19.19■□□□□ 0.66
NEO1-207ENST00000560262 TMEM2Q9UHN6 1383 aa19.18■□□□□ 0.66
NEO1-207ENST00000560262 ANKRD18BA2A2Z9 1011 aa19.18■□□□□ 0.66
NEO1-207ENST00000560262 ACSBG1Q96GR2 724 aa19.18■□□□□ 0.66
NEO1-207ENST00000560262 NPC1L1Q9UHC9 1359 aa19.18■□□□□ 0.66
NEO1-207ENST00000560262 DDX11Q96FC9 970 aa19.18■□□□□ 0.66
NEO1-207ENST00000560262 PCMTD1Q96MG8 357 aaPredicted RBP19.18■□□□□ 0.66
NEO1-207ENST00000560262 MRE11P49959 708 aa19.17■□□□□ 0.66
NEO1-207ENST00000560262 UBAC1Q9BSL1 405 aa19.17■□□□□ 0.66
NEO1-207ENST00000560262 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms