RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
DCAF11-227ENST00000560046 GJD4Q96KN9 370 aaPredicted RBP13.43□□□□□ -0.26
DCAF11-227ENST00000560046 COL18A1P39060 1754 aa13.43□□□□□ -0.26
DCAF11-227ENST00000560046 GCP02774 474 aa13.42□□□□□ -0.26
DCAF11-227ENST00000560046 MYT1Q01538 1121 aa13.42□□□□□ -0.26
DCAF11-227ENST00000560046 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
DCAF11-227ENST00000560046 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
DCAF11-227ENST00000560046 DDRGK1Q96HY6 314 aa13.42□□□□□ -0.26
DCAF11-227ENST00000560046 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
DCAF11-227ENST00000560046 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
DCAF11-227ENST00000560046 ADAMTS7Q9UKP4 1686 aa13.42□□□□□ -0.26
DCAF11-227ENST00000560046 ABCC6O95255 1503 aa13.42□□□□□ -0.26
DCAF11-227ENST00000560046 CEMIPQ8WUJ3 1361 aa13.42□□□□□ -0.26
DCAF11-227ENST00000560046 NBPF6Q5VWK0 638 aa13.41□□□□□ -0.26
DCAF11-227ENST00000560046 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
DCAF11-227ENST00000560046 LTV1Q96GA3 475 aaPredicted RBP13.41□□□□□ -0.26
DCAF11-227ENST00000560046 NBPF4Q96M43 638 aa13.41□□□□□ -0.26
DCAF11-227ENST00000560046 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
DCAF11-227ENST00000560046 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
DCAF11-227ENST00000560046 OVOS2A0A0G2JMS6 1433 aa13.4□□□□□ -0.26
DCAF11-227ENST00000560046 DDX17Q92841 729 aaKnown RBP13.4□□□□□ -0.26
DCAF11-227ENST00000560046 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
DCAF11-227ENST00000560046 BAG6P46379 1132 aa13.39□□□□□ -0.27
DCAF11-227ENST00000560046 NUCB1Q02818 461 aa13.39□□□□□ -0.27
DCAF11-227ENST00000560046 TAF7Q15545 349 aaPredicted RBP13.39□□□□□ -0.27
DCAF11-227ENST00000560046 GCC1Q96CN9 775 aa13.39□□□□□ -0.27
DCAF11-227ENST00000560046 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
DCAF11-227ENST00000560046 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
DCAF11-227ENST00000560046 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
DCAF11-227ENST00000560046 MIS18AQ9NYP9 233 aa13.38□□□□□ -0.27
DCAF11-227ENST00000560046 GLI3P10071 1580 aa13.37□□□□□ -0.27
DCAF11-227ENST00000560046 R3HDM1Q15032 1099 aaKnown RBP13.37□□□□□ -0.27
DCAF11-227ENST00000560046 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
DCAF11-227ENST00000560046 PXDNQ92626 1479 aa13.36□□□□□ -0.27
DCAF11-227ENST00000560046 PLEKHG2Q9H7P9 1386 aa13.36□□□□□ -0.27
DCAF11-227ENST00000560046 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
DCAF11-227ENST00000560046 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
DCAF11-227ENST00000560046 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
DCAF11-227ENST00000560046 ATP10DQ9P241 1426 aa13.36□□□□□ -0.27
DCAF11-227ENST00000560046 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 C1QTNF8P60827 252 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 CCDC30Q5VVM6 783 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 ZNF784Q8NCA9 323 aaPredicted RBP13.35□□□□□ -0.27
DCAF11-227ENST00000560046 ANKRD24Q8TF21 1146 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
DCAF11-227ENST00000560046 HOXB7P09629 217 aa13.34□□□□□ -0.27
DCAF11-227ENST00000560046 G2E3Q7L622 706 aa13.34□□□□□ -0.27
DCAF11-227ENST00000560046 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
DCAF11-227ENST00000560046 ANKRD44Q8N8A2 993 aa13.34□□□□□ -0.27
DCAF11-227ENST00000560046 SOS2Q07890 1332 aaPredicted RBP13.34□□□□□ -0.27
DCAF11-227ENST00000560046 NPHP3Q7Z494 1330 aa13.34□□□□□ -0.27
DCAF11-227ENST00000560046 SEC24BO95487 1268 aa13.33□□□□□ -0.28
DCAF11-227ENST00000560046 CCT4P50991 539 aaKnown RBP13.33□□□□□ -0.28
DCAF11-227ENST00000560046 ZNF530Q6P9A1 599 aaPredicted RBP13.33□□□□□ -0.28
DCAF11-227ENST00000560046 STK31Q9BXU1 1019 aa13.33□□□□□ -0.28
DCAF11-227ENST00000560046 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
DCAF11-227ENST00000560046 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
DCAF11-227ENST00000560046 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
DCAF11-227ENST00000560046 AXIN2Q9Y2T1 843 aa13.32□□□□□ -0.28
DCAF11-227ENST00000560046 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
DCAF11-227ENST00000560046 ERBB3P21860 1342 aa13.32□□□□□ -0.28
DCAF11-227ENST00000560046 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
DCAF11-227ENST00000560046 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
DCAF11-227ENST00000560046 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
DCAF11-227ENST00000560046 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
DCAF11-227ENST00000560046 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
DCAF11-227ENST00000560046 SPATA31A3Q5VYP0 1347 aa13.31□□□□□ -0.28
DCAF11-227ENST00000560046 FLIIQ13045 1269 aa13.3□□□□□ -0.28
DCAF11-227ENST00000560046 CEP85Q6P2H3 762 aa13.3□□□□□ -0.28
DCAF11-227ENST00000560046 SEPT12Q8IYM1 358 aa13.3□□□□□ -0.28
DCAF11-227ENST00000560046 TBC1D32Q96NH3 1257 aa13.3□□□□□ -0.28
DCAF11-227ENST00000560046 LNPKQ9C0E8 428 aa13.3□□□□□ -0.28
DCAF11-227ENST00000560046 CPDO75976 1380 aa13.3□□□□□ -0.28
DCAF11-227ENST00000560046 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
DCAF11-227ENST00000560046 BMP2KLQ5H9B9 411 aa13.29□□□□□ -0.28
DCAF11-227ENST00000560046 ANKRD45Q5TZF3 282 aa13.29□□□□□ -0.28
DCAF11-227ENST00000560046 KRT27Q7Z3Y8 459 aa13.29□□□□□ -0.28
DCAF11-227ENST00000560046 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
DCAF11-227ENST00000560046 MEIS3Q99687 375 aa13.29□□□□□ -0.28
DCAF11-227ENST00000560046 ABCA3Q99758 1704 aa13.28□□□□□ -0.28
DCAF11-227ENST00000560046 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
DCAF11-227ENST00000560046 C1orf141Q5JVX7 400 aa13.28□□□□□ -0.28
DCAF11-227ENST00000560046 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
DCAF11-227ENST00000560046 SLIT2O94813 1529 aa13.28□□□□□ -0.28
DCAF11-227ENST00000560046 PARP4Q9UKK3 1724 aaKnown RBP13.27□□□□□ -0.28
DCAF11-227ENST00000560046 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
DCAF11-227ENST00000560046 TEFQ10587 303 aa13.27□□□□□ -0.29
DCAF11-227ENST00000560046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
DCAF11-227ENST00000560046 DISP2A7MBM2 1401 aa13.27□□□□□ -0.29
DCAF11-227ENST00000560046 F6X3S4 739 aa13.26□□□□□ -0.29
DCAF11-227ENST00000560046 GNAI3P08754 354 aa13.26□□□□□ -0.29
DCAF11-227ENST00000560046 MRC1P22897 1456 aa13.26□□□□□ -0.29
DCAF11-227ENST00000560046 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
DCAF11-227ENST00000560046 TUBGCP6Q96RT7 1819 aa13.26□□□□□ -0.29
DCAF11-227ENST00000560046 CEP350Q5VT06 3117 aa13.26□□□□□ -0.29
DCAF11-227ENST00000560046 HMMRO75330 724 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms