RNA–Protein interactions for RNA: ENST00000558006.1

AC009996.1-201, humanhuman

TSL 5 BASIC

Gene AC009996.1, Length 653 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009996.1-201ENST00000558006 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
AC009996.1-201ENST00000558006 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
AC009996.1-201ENST00000558006 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
AC009996.1-201ENST00000558006 MAP3K19Q56UN5 1328 aa13.29□□□□□ -0.28
AC009996.1-201ENST00000558006 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
AC009996.1-201ENST00000558006 MEGF6O75095 1541 aa13.29□□□□□ -0.28
AC009996.1-201ENST00000558006 ST20-MTHFSA0A0A6YYL1 179 aa13.28□□□□□ -0.28
AC009996.1-201ENST00000558006 HOXC9P31274 260 aa13.28□□□□□ -0.28
AC009996.1-201ENST00000558006 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
AC009996.1-201ENST00000558006 SLC16A10Q8TF71 515 aa13.28□□□□□ -0.28
AC009996.1-201ENST00000558006 POLD1P28340 1107 aa13.27□□□□□ -0.29
AC009996.1-201ENST00000558006 AMPHP49418 695 aa13.27□□□□□ -0.29
AC009996.1-201ENST00000558006 TESK2Q96S53 571 aa13.27□□□□□ -0.29
AC009996.1-201ENST00000558006 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
AC009996.1-201ENST00000558006 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
AC009996.1-201ENST00000558006 COL23A1Q86Y22 540 aaPredicted RBP13.25□□□□□ -0.29
AC009996.1-201ENST00000558006 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
AC009996.1-201ENST00000558006 CCNL1Q9UK58 526 aaPredicted RBP13.25□□□□□ -0.29
AC009996.1-201ENST00000558006 RTL1A6NKG5 1358 aa13.24□□□□□ -0.29
AC009996.1-201ENST00000558006 RRS1Q15050 365 aaKnown RBP13.24□□□□□ -0.29
AC009996.1-201ENST00000558006 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
AC009996.1-201ENST00000558006 USHBP1Q8N6Y0 703 aa13.24□□□□□ -0.29
AC009996.1-201ENST00000558006 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
AC009996.1-201ENST00000558006 C5P01031 1676 aa13.24□□□□□ -0.29
AC009996.1-201ENST00000558006 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
AC009996.1-201ENST00000558006 PSEN1P49768 467 aa13.23□□□□□ -0.29
AC009996.1-201ENST00000558006 MSL1Q68DK7 614 aa13.23□□□□□ -0.29
AC009996.1-201ENST00000558006 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
AC009996.1-201ENST00000558006 GIGYF1O75420 1035 aaPredicted RBP13.22□□□□□ -0.29
AC009996.1-201ENST00000558006 USP47Q96K76 1375 aa13.21□□□□□ -0.29
AC009996.1-201ENST00000558006 ITGB4P16144 1822 aa13.21□□□□□ -0.29
AC009996.1-201ENST00000558006 TMF1P82094 1093 aa13.21□□□□□ -0.29
AC009996.1-201ENST00000558006 GGNBP2Q9H3C7 697 aa13.21□□□□□ -0.29
AC009996.1-201ENST00000558006 TOGARAM1Q9Y4F4 1720 aa13.2□□□□□ -0.3
AC009996.1-201ENST00000558006 FYB1O15117 783 aa13.2□□□□□ -0.3
AC009996.1-201ENST00000558006 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
AC009996.1-201ENST00000558006 MAP3K13O43283 966 aa13.19□□□□□ -0.3
AC009996.1-201ENST00000558006 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
AC009996.1-201ENST00000558006 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
AC009996.1-201ENST00000558006 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
AC009996.1-201ENST00000558006 CGNL1Q0VF96 1302 aa13.18□□□□□ -0.3
AC009996.1-201ENST00000558006 HSP90AB2PQ58FF8 381 aa13.18□□□□□ -0.3
AC009996.1-201ENST00000558006 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
AC009996.1-201ENST00000558006 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
AC009996.1-201ENST00000558006 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
AC009996.1-201ENST00000558006 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
AC009996.1-201ENST00000558006 CEP350Q5VT06 3117 aa13.17□□□□□ -0.3
AC009996.1-201ENST00000558006 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
AC009996.1-201ENST00000558006 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
AC009996.1-201ENST00000558006 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
AC009996.1-201ENST00000558006 FLT4P35916 1363 aa13.17□□□□□ -0.3
AC009996.1-201ENST00000558006 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
AC009996.1-201ENST00000558006 CYP27B1O15528 508 aa13.16□□□□□ -0.3
AC009996.1-201ENST00000558006 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
AC009996.1-201ENST00000558006 INSRP06213 1382 aa13.16□□□□□ -0.3
AC009996.1-201ENST00000558006 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
AC009996.1-201ENST00000558006 PCDH11XQ9BZA7 1347 aa13.15□□□□□ -0.3
AC009996.1-201ENST00000558006 PCDH11YQ9BZA8 1340 aa13.15□□□□□ -0.3
AC009996.1-201ENST00000558006 ATP10DQ9P241 1426 aa13.15□□□□□ -0.3
AC009996.1-201ENST00000558006 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
AC009996.1-201ENST00000558006 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
AC009996.1-201ENST00000558006 MAP2P11137 1827 aaKnown RBP13.14□□□□□ -0.31
AC009996.1-201ENST00000558006 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
AC009996.1-201ENST00000558006 KIF24Q5T7B8 1368 aa13.14□□□□□ -0.31
AC009996.1-201ENST00000558006 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
AC009996.1-201ENST00000558006 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
AC009996.1-201ENST00000558006 PHF14O94880 888 aa13.12□□□□□ -0.31
AC009996.1-201ENST00000558006 ZNF526Q8TF50 670 aaPredicted RBP13.12□□□□□ -0.31
AC009996.1-201ENST00000558006 PIGBQ92521 554 aa13.12□□□□□ -0.31
AC009996.1-201ENST00000558006 EMILIN1Q9Y6C2 1016 aa13.12□□□□□ -0.31
AC009996.1-201ENST00000558006 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
AC009996.1-201ENST00000558006 CARD14Q9BXL6 1004 aa13.11□□□□□ -0.31
AC009996.1-201ENST00000558006 ADCY9O60503 1353 aa13.1□□□□□ -0.31
AC009996.1-201ENST00000558006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
AC009996.1-201ENST00000558006 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
AC009996.1-201ENST00000558006 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
AC009996.1-201ENST00000558006 AK7Q96M32 723 aa13.1□□□□□ -0.31
AC009996.1-201ENST00000558006 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
AC009996.1-201ENST00000558006 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
AC009996.1-201ENST00000558006 IFFO2Q5TF58 517 aa13.09□□□□□ -0.31
AC009996.1-201ENST00000558006 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
AC009996.1-201ENST00000558006 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
AC009996.1-201ENST00000558006 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
AC009996.1-201ENST00000558006 ITPK1Q13572 414 aa13.08□□□□□ -0.32
AC009996.1-201ENST00000558006 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
AC009996.1-201ENST00000558006 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
AC009996.1-201ENST00000558006 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
AC009996.1-201ENST00000558006 SIK1P57059 783 aa13.07□□□□□ -0.32
AC009996.1-201ENST00000558006 MFRPQ9BY79 579 aa13.07□□□□□ -0.32
AC009996.1-201ENST00000558006 ASAP1Q9ULH1 1129 aa13.07□□□□□ -0.32
AC009996.1-201ENST00000558006 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
AC009996.1-201ENST00000558006 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
AC009996.1-201ENST00000558006 EYA1Q99502 592 aa13.06□□□□□ -0.32
AC009996.1-201ENST00000558006 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
AC009996.1-201ENST00000558006 GNPATO15228 680 aa13.05□□□□□ -0.32
AC009996.1-201ENST00000558006 SSFA2P28290 1259 aa13.05□□□□□ -0.32
AC009996.1-201ENST00000558006 NBR1Q14596 966 aa13.05□□□□□ -0.32
AC009996.1-201ENST00000558006 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
AC009996.1-201ENST00000558006 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
AC009996.1-201ENST00000558006 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms