RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
ABCD4-223ENST00000555904 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
ABCD4-223ENST00000555904 ZNF521Q96K83 1311 aa16.29■□□□□ 0.2
ABCD4-223ENST00000555904 TTC5Q8N0Z6 440 aa16.29■□□□□ 0.2
ABCD4-223ENST00000555904 NHSQ6T4R5 1651 aa16.28■□□□□ 0.2
ABCD4-223ENST00000555904 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
ABCD4-223ENST00000555904 BCL11BQ9C0K0 894 aaPredicted RBP16.28■□□□□ 0.2
ABCD4-223ENST00000555904 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
ABCD4-223ENST00000555904 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
ABCD4-223ENST00000555904 E9PSI1 815 aa16.27■□□□□ 0.2
ABCD4-223ENST00000555904 PIGBQ92521 554 aa16.27■□□□□ 0.2
ABCD4-223ENST00000555904 KCNQ2O43526 872 aa16.26■□□□□ 0.19
ABCD4-223ENST00000555904 TRIM37O94972 964 aa16.26■□□□□ 0.19
ABCD4-223ENST00000555904 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
ABCD4-223ENST00000555904 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
ABCD4-223ENST00000555904 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
ABCD4-223ENST00000555904 CHL1O00533 1208 aa16.24■□□□□ 0.19
ABCD4-223ENST00000555904 ZNF790Q6PG37 636 aa16.24■□□□□ 0.19
ABCD4-223ENST00000555904 MIS18AQ9NYP9 233 aa16.24■□□□□ 0.19
ABCD4-223ENST00000555904 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
ABCD4-223ENST00000555904 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
ABCD4-223ENST00000555904 FANCIQ9NVI1 1328 aa16.22■□□□□ 0.19
ABCD4-223ENST00000555904 ITGB4P16144 1822 aa16.22■□□□□ 0.19
ABCD4-223ENST00000555904 ZNF853P0CG23 659 aa16.22■□□□□ 0.19
ABCD4-223ENST00000555904 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
ABCD4-223ENST00000555904 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
ABCD4-223ENST00000555904 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
ABCD4-223ENST00000555904 PAPPAQ13219 1627 aa16.21■□□□□ 0.19
ABCD4-223ENST00000555904 SLFN5Q08AF3 891 aa16.21■□□□□ 0.19
ABCD4-223ENST00000555904 SLC39A6Q13433 755 aa16.21■□□□□ 0.19
ABCD4-223ENST00000555904 FMNL2Q96PY5 1086 aa16.21■□□□□ 0.19
ABCD4-223ENST00000555904 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
ABCD4-223ENST00000555904 SBF2Q86WG5 1849 aa16.2■□□□□ 0.18
ABCD4-223ENST00000555904 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
ABCD4-223ENST00000555904 APBA3O96018 575 aa16.2■□□□□ 0.18
ABCD4-223ENST00000555904 CCDC125Q86Z20 511 aa16.2■□□□□ 0.18
ABCD4-223ENST00000555904 CDCA7LQ96GN5 454 aa16.2■□□□□ 0.18
ABCD4-223ENST00000555904 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
ABCD4-223ENST00000555904 BTAF1O14981 1849 aa16.19■□□□□ 0.18
ABCD4-223ENST00000555904 KDM3BQ7LBC6 1761 aa16.19■□□□□ 0.18
ABCD4-223ENST00000555904 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
ABCD4-223ENST00000555904 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
ABCD4-223ENST00000555904 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
ABCD4-223ENST00000555904 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
ABCD4-223ENST00000555904 EP400Q96L91 3159 aa16.18■□□□□ 0.18
ABCD4-223ENST00000555904 KCNQ3O43525 872 aa16.17■□□□□ 0.18
ABCD4-223ENST00000555904 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
ABCD4-223ENST00000555904 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
ABCD4-223ENST00000555904 KCPQ6ZWJ8 1503 aa16.17■□□□□ 0.18
ABCD4-223ENST00000555904 HEG1Q9ULI3 1381 aa16.16■□□□□ 0.18
ABCD4-223ENST00000555904 LOC102724428A0A0B4J2F2 783 aa16.16■□□□□ 0.18
ABCD4-223ENST00000555904 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
ABCD4-223ENST00000555904 BAG6P46379 1132 aa16.16■□□□□ 0.18
ABCD4-223ENST00000555904 SIK1P57059 783 aa16.16■□□□□ 0.18
ABCD4-223ENST00000555904 DUSP27Q5VZP5 1158 aa16.16■□□□□ 0.18
ABCD4-223ENST00000555904 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
ABCD4-223ENST00000555904 TNS1Q9HBL0 1735 aaKnown RBP16.16■□□□□ 0.18
ABCD4-223ENST00000555904 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
ABCD4-223ENST00000555904 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
ABCD4-223ENST00000555904 PLSCR1O15162 318 aa16.15■□□□□ 0.18
ABCD4-223ENST00000555904 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
ABCD4-223ENST00000555904 TRMT2AQ8IZ69 625 aaKnown RBP16.15■□□□□ 0.18
ABCD4-223ENST00000555904 TEX13AQ9BXU3 409 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-223ENST00000555904 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-223ENST00000555904 KAT6BQ8WYB5 2073 aa16.14■□□□□ 0.17
ABCD4-223ENST00000555904 HOXB7P09629 217 aa16.14■□□□□ 0.17
ABCD4-223ENST00000555904 EXOSC9Q06265 439 aaKnown RBP16.14■□□□□ 0.17
ABCD4-223ENST00000555904 TWISTNBQ3B726 338 aaPredicted RBP16.14■□□□□ 0.17
ABCD4-223ENST00000555904 SLC27A3Q5K4L6 730 aa16.14■□□□□ 0.17
ABCD4-223ENST00000555904 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-223ENST00000555904 STARD3NLO95772 234 aa16.13■□□□□ 0.17
ABCD4-223ENST00000555904 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-223ENST00000555904 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
ABCD4-223ENST00000555904 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
ABCD4-223ENST00000555904 ILDR2Q71H61 639 aa16.12■□□□□ 0.17
ABCD4-223ENST00000555904 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
ABCD4-223ENST00000555904 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
ABCD4-223ENST00000555904 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
ABCD4-223ENST00000555904 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
ABCD4-223ENST00000555904 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
ABCD4-223ENST00000555904 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
ABCD4-223ENST00000555904 ZNF831Q5JPB2 1677 aa16.1■□□□□ 0.17
ABCD4-223ENST00000555904 LY75O60449 1722 aa16.1■□□□□ 0.17
ABCD4-223ENST00000555904 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
ABCD4-223ENST00000555904 EN1Q05925 392 aaPredicted RBP16.09■□□□□ 0.17
ABCD4-223ENST00000555904 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
ABCD4-223ENST00000555904 DNAJC10Q8IXB1 793 aa16.09■□□□□ 0.17
ABCD4-223ENST00000555904 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
ABCD4-223ENST00000555904 UPF1Q92900 1129 aaKnown RBP eCLIP16.09■□□□□ 0.17
ABCD4-223ENST00000555904 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
ABCD4-223ENST00000555904 CICQ96RK0 1608 aaPredicted RBP16.08■□□□□ 0.17
ABCD4-223ENST00000555904 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.17
ABCD4-223ENST00000555904 ITPK1Q13572 414 aa16.08■□□□□ 0.16
ABCD4-223ENST00000555904 NPM2Q86SE8 214 aaKnown RBP16.08■□□□□ 0.16
ABCD4-223ENST00000555904 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
ABCD4-223ENST00000555904 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
ABCD4-223ENST00000555904 KCNQ4P56696 695 aa16.07■□□□□ 0.16
ABCD4-223ENST00000555904 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
ABCD4-223ENST00000555904 CAMKK2Q96RR4 588 aa16.07■□□□□ 0.16
ABCD4-223ENST00000555904 USP16Q9Y5T5 823 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms