RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 IP6K1Q92551 441 aa14.71□□□□□ -0.05
SRP54-205ENST00000554803 PALLDQ8WX93 1383 aa14.71□□□□□ -0.06
SRP54-205ENST00000554803 CD163L1Q9NR16 1453 aa14.7□□□□□ -0.06
SRP54-205ENST00000554803 HSPA1AP0DMV8 641 aaKnown RBP14.7□□□□□ -0.06
SRP54-205ENST00000554803 HSPA1BP0DMV9 641 aaKnown RBP14.7□□□□□ -0.06
SRP54-205ENST00000554803 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
SRP54-205ENST00000554803 AK7Q96M32 723 aa14.7□□□□□ -0.06
SRP54-205ENST00000554803 LTV1Q96GA3 475 aaPredicted RBP14.69□□□□□ -0.06
SRP54-205ENST00000554803 MYBBP1AQ9BQG0 1328 aaKnown RBP14.68□□□□□ -0.06
SRP54-205ENST00000554803 KCPQ6ZWJ8 1503 aa14.68□□□□□ -0.06
SRP54-205ENST00000554803 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.68□□□□□ -0.06
SRP54-205ENST00000554803 PHF14O94880 888 aa14.68□□□□□ -0.06
SRP54-205ENST00000554803 SSFA2P28290 1259 aa14.68□□□□□ -0.06
SRP54-205ENST00000554803 BCS1LQ9Y276 419 aa14.68□□□□□ -0.06
SRP54-205ENST00000554803 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
SRP54-205ENST00000554803 TGFB2P61812 414 aa14.67□□□□□ -0.06
SRP54-205ENST00000554803 ARHGAP27Q6ZUM4 889 aa14.67□□□□□ -0.06
SRP54-205ENST00000554803 SMIM5Q71RC9 77 aa14.66□□□□□ -0.06
SRP54-205ENST00000554803 ERICH6Q7L0X2 663 aa14.66□□□□□ -0.06
SRP54-205ENST00000554803 EDC4Q6P2E9 1401 aaKnown RBP14.66□□□□□ -0.06
SRP54-205ENST00000554803 CGNL1Q0VF96 1302 aa14.66□□□□□ -0.06
SRP54-205ENST00000554803 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
SRP54-205ENST00000554803 CDCA8Q53HL2 280 aa14.65□□□□□ -0.06
SRP54-205ENST00000554803 C9orf131Q5VYM1 1079 aa14.65□□□□□ -0.06
SRP54-205ENST00000554803 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
SRP54-205ENST00000554803 C4AP0C0L4 1744 aa14.64□□□□□ -0.07
SRP54-205ENST00000554803 SMC1BQ8NDV3 1235 aa14.64□□□□□ -0.07
SRP54-205ENST00000554803 TMC1Q8TDI8 760 aa14.64□□□□□ -0.07
SRP54-205ENST00000554803 A0A0G2JLW4 131 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 FCHSD2O94868 740 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 MMP10P09238 476 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 HOXC9P31274 260 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 CCDC184Q52MB2 194 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 MPRIPQ6WCQ1 1025 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 SMARCC1Q92922 1105 aaPredicted RBP14.63□□□□□ -0.07
SRP54-205ENST00000554803 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
SRP54-205ENST00000554803 RRAGCQ9HB90 399 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 CCDC88AQ3V6T2 1871 aa14.63□□□□□ -0.07
SRP54-205ENST00000554803 MAP3K19Q56UN5 1328 aa14.62□□□□□ -0.07
SRP54-205ENST00000554803 SLC12A5Q9H2X9 1139 aa14.61□□□□□ -0.07
SRP54-205ENST00000554803 PCDH11XQ9BZA7 1347 aa14.61□□□□□ -0.07
SRP54-205ENST00000554803 PCDH11YQ9BZA8 1340 aa14.61□□□□□ -0.07
SRP54-205ENST00000554803 DPEP1P16444 411 aa14.6□□□□□ -0.07
SRP54-205ENST00000554803 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
SRP54-205ENST00000554803 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
SRP54-205ENST00000554803 LINC00116Q8NCU8 138 aa14.59□□□□□ -0.07
SRP54-205ENST00000554803 RAPGEF4Q8WZA2 1011 aa14.59□□□□□ -0.07
SRP54-205ENST00000554803 PANK3Q9H999 370 aa14.59□□□□□ -0.07
SRP54-205ENST00000554803 RTL1A6NKG5 1358 aa14.59□□□□□ -0.07
SRP54-205ENST00000554803 TATP17735 454 aaPredicted RBP14.58□□□□□ -0.08
SRP54-205ENST00000554803 AMPHP49418 695 aa14.58□□□□□ -0.08
SRP54-205ENST00000554803 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
SRP54-205ENST00000554803 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
SRP54-205ENST00000554803 RNF181Q9P0P0 153 aa14.58□□□□□ -0.08
SRP54-205ENST00000554803 A0A1W2PP64 1363 aa14.58□□□□□ -0.08
SRP54-205ENST00000554803 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
SRP54-205ENST00000554803 GNPATO15228 680 aa14.57□□□□□ -0.08
SRP54-205ENST00000554803 KCNA3P22001 575 aa14.57□□□□□ -0.08
SRP54-205ENST00000554803 SIK1P57059 783 aa14.57□□□□□ -0.08
SRP54-205ENST00000554803 USHBP1Q8N6Y0 703 aa14.57□□□□□ -0.08
SRP54-205ENST00000554803 TERF2IPQ9NYB0 399 aa14.57□□□□□ -0.08
SRP54-205ENST00000554803 ZNF831Q5JPB2 1677 aa14.57□□□□□ -0.08
SRP54-205ENST00000554803 COL5A3P25940 1745 aaPredicted RBP14.57□□□□□ -0.08
SRP54-205ENST00000554803 TIAM2Q8IVF5 1701 aa14.57□□□□□ -0.08
SRP54-205ENST00000554803 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
SRP54-205ENST00000554803 CYP27B1O15528 508 aa14.56□□□□□ -0.08
SRP54-205ENST00000554803 NLGN1Q8N2Q7 840 aa14.56□□□□□ -0.08
SRP54-205ENST00000554803 PIGBQ92521 554 aa14.56□□□□□ -0.08
SRP54-205ENST00000554803 DCAF5Q96JK2 942 aa14.56□□□□□ -0.08
SRP54-205ENST00000554803 CCDC87Q9NVE4 849 aa14.56□□□□□ -0.08
SRP54-205ENST00000554803 CCDC136Q96JN2 1154 aa14.55□□□□□ -0.08
SRP54-205ENST00000554803 CARD14Q9BXL6 1004 aa14.55□□□□□ -0.08
SRP54-205ENST00000554803 MYH14Q7Z406 1995 aaKnown RBP14.54□□□□□ -0.08
SRP54-205ENST00000554803 PER1O15534 1290 aaPredicted RBP14.54□□□□□ -0.08
SRP54-205ENST00000554803 FBLN1P23142 703 aa14.54□□□□□ -0.08
SRP54-205ENST00000554803 ITPK1Q13572 414 aa14.54□□□□□ -0.08
SRP54-205ENST00000554803 PIM2Q9P1W9 311 aa14.54□□□□□ -0.08
SRP54-205ENST00000554803 ZC3H4Q9UPT8 1303 aaKnown RBP14.54□□□□□ -0.08
SRP54-205ENST00000554803 IRX6P78412 446 aaPredicted RBP14.53□□□□□ -0.08
SRP54-205ENST00000554803 COG3Q96JB2 828 aa14.53□□□□□ -0.08
SRP54-205ENST00000554803 DICER1Q9UPY3 1922 aaKnown RBP14.53□□□□□ -0.08
SRP54-205ENST00000554803 VIRMAQ69YN4 1812 aaKnown RBP14.52□□□□□ -0.08
SRP54-205ENST00000554803 KDM6AO15550 1401 aaPredicted RBP14.52□□□□□ -0.08
SRP54-205ENST00000554803 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.09
SRP54-205ENST00000554803 PRDM10Q9NQV6 1147 aa14.52□□□□□ -0.09
SRP54-205ENST00000554803 FOXN1O15353 648 aa14.51□□□□□ -0.09
SRP54-205ENST00000554803 MS4A1P11836 297 aa14.51□□□□□ -0.09
SRP54-205ENST00000554803 VEGFAP15692 232 aaPredicted RBP14.51□□□□□ -0.09
SRP54-205ENST00000554803 ATP6V1AP38606 617 aa14.51□□□□□ -0.09
SRP54-205ENST00000554803 ANP32AP39687 249 aaKnown RBP14.51□□□□□ -0.09
SRP54-205ENST00000554803 NKX1-1Q15270 411 aaPredicted RBP14.51□□□□□ -0.09
SRP54-205ENST00000554803 DALRD3Q5D0E6 543 aaKnown RBP14.51□□□□□ -0.09
SRP54-205ENST00000554803 TRAPPC3LQ5T215 181 aa14.51□□□□□ -0.09
SRP54-205ENST00000554803 PARP3Q9Y6F1 533 aa14.51□□□□□ -0.09
SRP54-205ENST00000554803 DLEC1Q9Y238 1755 aa14.51□□□□□ -0.09
SRP54-205ENST00000554803 TCERG1O14776 1098 aaKnown RBP14.5□□□□□ -0.09
SRP54-205ENST00000554803 GYS1P13807 737 aa14.5□□□□□ -0.09
SRP54-205ENST00000554803 B4GALNT3Q6L9W6 998 aa14.5□□□□□ -0.09
SRP54-205ENST00000554803 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms