RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 TIAM1Q13009 1591 aa7.07□□□□□ -1.28
PPP4R3A-204ENST00000554574 E9PSI1 815 aa7.06□□□□□ -1.28
PPP4R3A-204ENST00000554574 NOM1Q5C9Z4 860 aaKnown RBP7.06□□□□□ -1.28
PPP4R3A-204ENST00000554574 TRMT44Q8IYL2 757 aaKnown RBP7.06□□□□□ -1.28
PPP4R3A-204ENST00000554574 SNAPC4Q5SXM2 1469 aa7.06□□□□□ -1.28
PPP4R3A-204ENST00000554574 FYCO1Q9BQS8 1478 aa7.05□□□□□ -1.28
PPP4R3A-204ENST00000554574 GRIN2AQ12879 1464 aa7.05□□□□□ -1.28
PPP4R3A-204ENST00000554574 PPEF1O14829 653 aaPredicted RBP7.05□□□□□ -1.28
PPP4R3A-204ENST00000554574 RAB15P59190 212 aa7.05□□□□□ -1.28
PPP4R3A-204ENST00000554574 TAS1R3Q7RTX0 852 aa7.05□□□□□ -1.28
PPP4R3A-204ENST00000554574 SEPT12Q8IYM1 358 aa7.05□□□□□ -1.28
PPP4R3A-204ENST00000554574 RBM19Q9Y4C8 960 aaKnown RBP7.05□□□□□ -1.28
PPP4R3A-204ENST00000554574 FMN1Q68DA7 1419 aa7.05□□□□□ -1.28
PPP4R3A-204ENST00000554574 UNCXA6NJT0 531 aa7.04□□□□□ -1.28
PPP4R3A-204ENST00000554574 USP4Q13107 963 aa7.04□□□□□ -1.28
PPP4R3A-204ENST00000554574 FHOD3Q2V2M9 1422 aa7.04□□□□□ -1.28
PPP4R3A-204ENST00000554574 LRRIQ1Q96JM4 1722 aa7.04□□□□□ -1.28
PPP4R3A-204ENST00000554574 SYNJ2O15056 1496 aa7.04□□□□□ -1.28
PPP4R3A-204ENST00000554574 ZNF211Q13398 564 aaPredicted RBP7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 SIRT1Q96EB6 747 aa7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 BIN2Q9UBW5 565 aaPredicted RBP7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 UGGT2Q9NYU1 1516 aa7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 CASKIN1Q8WXD9 1431 aa7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 SCTRP47872 440 aa7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 TSEN2Q8NCE0 465 aaKnown RBP7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 KCTD15Q96SI1 283 aaPredicted RBP7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 HINFPQ9BQA5 517 aa7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 CDV3Q9UKY7 258 aaKnown RBP7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 KIAA0586Q9BVV6 1533 aa7.03□□□□□ -1.28
PPP4R3A-204ENST00000554574 TTBK1Q5TCY1 1321 aaPredicted RBP7.02□□□□□ -1.29
PPP4R3A-204ENST00000554574 ABL1P00519 1130 aa7.02□□□□□ -1.29
PPP4R3A-204ENST00000554574 ANO2Q9NQ90 1003 aa7.02□□□□□ -1.29
PPP4R3A-204ENST00000554574 RBM47A0AV96 593 aaKnown RBP7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 MARSP56192 900 aaKnown RBP7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 TRIM32Q13049 653 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 INTS6LQ5JSJ4 861 aaKnown RBP7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 PLA2G2CQ5R387 149 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 PURBQ96QR8 312 aaKnown RBP7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 CEP170Q5SW79 1584 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 LRRC9Q6ZRR7 1453 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 H3BRB1 525 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 WEE1P30291 646 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 SKOR1P84550 965 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 CAPN12Q6ZSI9 719 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 GAS2L2Q8NHY3 880 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 TUT1Q9H6E5 874 aaKnown RBP7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 SEPT3Q9UH03 358 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 EGFL7Q9UHF1 273 aa7.01□□□□□ -1.29
PPP4R3A-204ENST00000554574 ERVH48-1M5A8F1 160 aa7□□□□□ -1.29
PPP4R3A-204ENST00000554574 FKBP5Q13451 457 aaPredicted RBP7□□□□□ -1.29
PPP4R3A-204ENST00000554574 CCDC125Q86Z20 511 aa7□□□□□ -1.29
PPP4R3A-204ENST00000554574 KIAA0556O60303 1618 aa7□□□□□ -1.29
PPP4R3A-204ENST00000554574 CHD1O14646 1710 aa7□□□□□ -1.29
PPP4R3A-204ENST00000554574 RNF223E7ERA6 249 aa6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 MYCP01106 439 aaPredicted RBP6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 ERCC3P19447 782 aa6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 VASH1Q7L8A9 365 aaPredicted RBP6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 ZNF358Q9NW07 568 aa6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 NUP160Q12769 1436 aa6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 RRBP1Q9P2E9 1410 aaKnown RBP6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 HECW1Q76N89 1606 aa6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 M0R2N6 131 aa6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 ZBTB24O43167 697 aaPredicted RBP6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 ICMTO60725 284 aa6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 STAU1O95793 577 aaKnown RBP6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 GTF3C2Q8WUA4 911 aaPredicted RBP6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 MAP4K5Q9Y4K4 846 aa6.99□□□□□ -1.29
PPP4R3A-204ENST00000554574 TMEM229AB2RXF0 380 aa6.98□□□□□ -1.29
PPP4R3A-204ENST00000554574 VARSP26640 1264 aaKnown RBP6.98□□□□□ -1.29
PPP4R3A-204ENST00000554574 DNMT3AQ9Y6K1 912 aaPredicted RBP6.98□□□□□ -1.29
PPP4R3A-204ENST00000554574 DISP1Q96F81 1524 aa6.98□□□□□ -1.29
PPP4R3A-204ENST00000554574 ZEB1P37275 1124 aaPredicted RBP6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 WNT7BP56706 349 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 ERVK-9P63128 1117 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 MTMR3Q13615 1198 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 ECM1Q16610 540 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 GLYCTKQ8IVS8 523 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 ANKRD33BA6NCL7 494 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 SCNN1DP51172 638 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 NPAS4Q8IUM7 802 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 ANKLE1Q8NAG6 615 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 CHMP7Q8WUX9 453 aaPredicted RBP6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 CCDC18Q5T9S5 1454 aa6.97□□□□□ -1.29
PPP4R3A-204ENST00000554574 SUPT6HQ7KZ85 1726 aaKnown RBP6.96□□□□□ -1.3
PPP4R3A-204ENST00000554574 C21orf2O43822 256 aa6.96□□□□□ -1.3
PPP4R3A-204ENST00000554574 CC2D2BQ6DHV5 1058 aa6.96□□□□□ -1.3
PPP4R3A-204ENST00000554574 BCL2L13Q9BXK5 485 aa6.96□□□□□ -1.3
PPP4R3A-204ENST00000554574 CYLDQ9NQC7 956 aa6.96□□□□□ -1.3
PPP4R3A-204ENST00000554574 TMPRSS4Q9NRS4 437 aa6.96□□□□□ -1.3
PPP4R3A-204ENST00000554574 KIAA1522Q9P206 1035 aaPredicted RBP6.96□□□□□ -1.3
PPP4R3A-204ENST00000554574 ZNF16P17020 682 aaPredicted RBP6.95□□□□□ -1.3
PPP4R3A-204ENST00000554574 FSHRP23945 695 aa6.95□□□□□ -1.3
PPP4R3A-204ENST00000554574 ARID5BQ14865 1188 aa6.95□□□□□ -1.3
PPP4R3A-204ENST00000554574 EHBP1L1Q8N3D4 1523 aa6.95□□□□□ -1.3
PPP4R3A-204ENST00000554574 RAPGEF6Q8TEU7 1601 aa6.95□□□□□ -1.3
PPP4R3A-204ENST00000554574 GDF10P55107 478 aa6.95□□□□□ -1.3
PPP4R3A-204ENST00000554574 KCNC4Q03721 635 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms