RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TMOD3Q9NYL9 352 aa17.17■□□□□ 0.34
RAB5C-206ENST00000550406 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
RAB5C-206ENST00000550406 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
RAB5C-206ENST00000550406 ASAP1Q9ULH1 1129 aa17.16■□□□□ 0.34
RAB5C-206ENST00000550406 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
RAB5C-206ENST00000550406 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
RAB5C-206ENST00000550406 APBA3O96018 575 aa17.15■□□□□ 0.34
RAB5C-206ENST00000550406 CCDC27Q2M243 656 aa17.15■□□□□ 0.34
RAB5C-206ENST00000550406 ATG3Q9NT62 314 aa17.15■□□□□ 0.34
RAB5C-206ENST00000550406 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
RAB5C-206ENST00000550406 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
RAB5C-206ENST00000550406 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
RAB5C-206ENST00000550406 LMOD3Q0VAK6 560 aa17.14■□□□□ 0.33
RAB5C-206ENST00000550406 TEFQ10587 303 aa17.14■□□□□ 0.33
RAB5C-206ENST00000550406 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
RAB5C-206ENST00000550406 DEFB132Q7Z7B7 95 aa17.14■□□□□ 0.33
RAB5C-206ENST00000550406 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
RAB5C-206ENST00000550406 PLSCR1O15162 318 aa17.13■□□□□ 0.33
RAB5C-206ENST00000550406 KCNQ3O43525 872 aa17.13■□□□□ 0.33
RAB5C-206ENST00000550406 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-206ENST00000550406 PROM2Q8N271 834 aa17.13■□□□□ 0.33
RAB5C-206ENST00000550406 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
RAB5C-206ENST00000550406 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
RAB5C-206ENST00000550406 EN1Q05925 392 aaPredicted RBP17.12■□□□□ 0.33
RAB5C-206ENST00000550406 RREB1Q92766 1687 aa17.12■□□□□ 0.33
RAB5C-206ENST00000550406 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
RAB5C-206ENST00000550406 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
RAB5C-206ENST00000550406 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
RAB5C-206ENST00000550406 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
RAB5C-206ENST00000550406 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
RAB5C-206ENST00000550406 ZNF853P0CG23 659 aa17.1■□□□□ 0.33
RAB5C-206ENST00000550406 SF3B2Q13435 895 aaKnown RBP17.1■□□□□ 0.33
RAB5C-206ENST00000550406 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
RAB5C-206ENST00000550406 PALLDQ8WX93 1383 aa17.1■□□□□ 0.33
RAB5C-206ENST00000550406 BAG6P46379 1132 aa17.09■□□□□ 0.33
RAB5C-206ENST00000550406 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
RAB5C-206ENST00000550406 SMARCC1Q92922 1105 aaPredicted RBP17.09■□□□□ 0.33
RAB5C-206ENST00000550406 ZNF831Q5JPB2 1677 aa17.09■□□□□ 0.33
RAB5C-206ENST00000550406 TJP1Q07157 1748 aa17.09■□□□□ 0.33
RAB5C-206ENST00000550406 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
RAB5C-206ENST00000550406 CHL1O00533 1208 aa17.08■□□□□ 0.32
RAB5C-206ENST00000550406 KCNQ4P56696 695 aa17.08■□□□□ 0.32
RAB5C-206ENST00000550406 TXNRD1Q16881 649 aa17.08■□□□□ 0.32
RAB5C-206ENST00000550406 ZNF790Q6PG37 636 aa17.08■□□□□ 0.32
RAB5C-206ENST00000550406 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
RAB5C-206ENST00000550406 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
RAB5C-206ENST00000550406 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
RAB5C-206ENST00000550406 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-206ENST00000550406 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
RAB5C-206ENST00000550406 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
RAB5C-206ENST00000550406 CFAP44Q96MT7 982 aa17.06■□□□□ 0.32
RAB5C-206ENST00000550406 BABAM1Q9NWV8 329 aa17.06■□□□□ 0.32
RAB5C-206ENST00000550406 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
RAB5C-206ENST00000550406 COL5A3P25940 1745 aaPredicted RBP17.06■□□□□ 0.32
RAB5C-206ENST00000550406 C5P01031 1676 aa17.06■□□□□ 0.32
RAB5C-206ENST00000550406 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
RAB5C-206ENST00000550406 SIK1P57059 783 aa17.05■□□□□ 0.32
RAB5C-206ENST00000550406 ITPK1Q13572 414 aa17.05■□□□□ 0.32
RAB5C-206ENST00000550406 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
RAB5C-206ENST00000550406 TSPYL4Q9UJ04 414 aa17.05■□□□□ 0.32
RAB5C-206ENST00000550406 MYH14Q7Z406 1995 aaKnown RBP17.04■□□□□ 0.32
RAB5C-206ENST00000550406 IL16Q14005 1332 aa17.04■□□□□ 0.32
RAB5C-206ENST00000550406 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
RAB5C-206ENST00000550406 HNRNPUQ00839 825 aaKnown RBP eCLIP17.04■□□□□ 0.32
RAB5C-206ENST00000550406 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
RAB5C-206ENST00000550406 IFT57Q9NWB7 429 aa17.04■□□□□ 0.32
RAB5C-206ENST00000550406 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
RAB5C-206ENST00000550406 GNAI1P63096 354 aa17.03■□□□□ 0.32
RAB5C-206ENST00000550406 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
RAB5C-206ENST00000550406 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
RAB5C-206ENST00000550406 CCNL1Q9UK58 526 aaPredicted RBP17.03■□□□□ 0.32
RAB5C-206ENST00000550406 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.32
RAB5C-206ENST00000550406 ATP6V1AP38606 617 aa17.02■□□□□ 0.32
RAB5C-206ENST00000550406 TUBGCP6Q96RT7 1819 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 LINC00116Q8NCU8 138 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
RAB5C-206ENST00000550406 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
RAB5C-206ENST00000550406 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
RAB5C-206ENST00000550406 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
RAB5C-206ENST00000550406 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
RAB5C-206ENST00000550406 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
RAB5C-206ENST00000550406 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
RAB5C-206ENST00000550406 USP16Q9Y5T5 823 aa16.99■□□□□ 0.31
RAB5C-206ENST00000550406 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
RAB5C-206ENST00000550406 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
RAB5C-206ENST00000550406 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
RAB5C-206ENST00000550406 ZNF827Q17R98 1081 aa16.97■□□□□ 0.31
RAB5C-206ENST00000550406 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
RAB5C-206ENST00000550406 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
RAB5C-206ENST00000550406 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
RAB5C-206ENST00000550406 CYP19A1P11511 503 aaPredicted RBP16.96■□□□□ 0.31
RAB5C-206ENST00000550406 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
RAB5C-206ENST00000550406 AKT1S1Q96B36 256 aa16.96■□□□□ 0.31
RAB5C-206ENST00000550406 INTS5Q6P9B9 1019 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms