RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
SRP54-202ENST00000546080 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
SRP54-202ENST00000546080 CHL1O00533 1208 aa17.19■□□□□ 0.34
SRP54-202ENST00000546080 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
SRP54-202ENST00000546080 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
SRP54-202ENST00000546080 USP25Q9UHP3 1055 aa17.18■□□□□ 0.34
SRP54-202ENST00000546080 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
SRP54-202ENST00000546080 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
SRP54-202ENST00000546080 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
SRP54-202ENST00000546080 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
SRP54-202ENST00000546080 ZNF830Q96NB3 372 aaPredicted RBP17.18■□□□□ 0.34
SRP54-202ENST00000546080 EXOC6BQ9Y2D4 811 aa17.18■□□□□ 0.34
SRP54-202ENST00000546080 DLC1Q96QB1 1528 aa17.17■□□□□ 0.34
SRP54-202ENST00000546080 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
SRP54-202ENST00000546080 CCDC183Q5T5S1 534 aa17.17■□□□□ 0.34
SRP54-202ENST00000546080 MCM10Q7L590 875 aa17.17■□□□□ 0.34
SRP54-202ENST00000546080 MPNDQ8N594 471 aa17.17■□□□□ 0.34
SRP54-202ENST00000546080 SALL3Q9BXA9 1300 aa17.17■□□□□ 0.34
SRP54-202ENST00000546080 MX1P20591 662 aa17.16■□□□□ 0.34
SRP54-202ENST00000546080 CHMLP26374 656 aa17.16■□□□□ 0.34
SRP54-202ENST00000546080 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
SRP54-202ENST00000546080 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
SRP54-202ENST00000546080 PRDM10Q9NQV6 1147 aa17.16■□□□□ 0.34
SRP54-202ENST00000546080 RAPGEF3O95398 923 aa17.16■□□□□ 0.34
SRP54-202ENST00000546080 ADCY5O95622 1261 aa17.16■□□□□ 0.34
SRP54-202ENST00000546080 UPF3BQ9BZI7 483 aaKnown RBP17.16■□□□□ 0.34
SRP54-202ENST00000546080 LETM1O95202 739 aaPredicted RBP17.15■□□□□ 0.34
SRP54-202ENST00000546080 GNAI2P04899 355 aa17.15■□□□□ 0.34
SRP54-202ENST00000546080 GTF2F1P35269 517 aaKnown RBP eCLIP17.15■□□□□ 0.34
SRP54-202ENST00000546080 SULT6B1Q6IMI4 303 aa17.15■□□□□ 0.34
SRP54-202ENST00000546080 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
SRP54-202ENST00000546080 TUBGCP6Q96RT7 1819 aa17.15■□□□□ 0.34
SRP54-202ENST00000546080 TMEM87AQ8NBN3 555 aa17.15■□□□□ 0.34
SRP54-202ENST00000546080 TTC12Q9H892 705 aaPredicted RBP17.15■□□□□ 0.34
SRP54-202ENST00000546080 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
SRP54-202ENST00000546080 NRKQ7Z2Y5 1582 aa17.14■□□□□ 0.33
SRP54-202ENST00000546080 F6X3S4 739 aa17.13■□□□□ 0.33
SRP54-202ENST00000546080 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
SRP54-202ENST00000546080 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
SRP54-202ENST00000546080 SRCIN1Q9C0H9 1055 aa17.13■□□□□ 0.33
SRP54-202ENST00000546080 CPS1P31327 1500 aa17.13■□□□□ 0.33
SRP54-202ENST00000546080 ZNF710Q8N1W2 664 aa17.13■□□□□ 0.33
SRP54-202ENST00000546080 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
SRP54-202ENST00000546080 RPAP1Q9BWH6 1393 aaPredicted RBP17.12■□□□□ 0.33
SRP54-202ENST00000546080 WASLO00401 505 aaPredicted RBP17.12■□□□□ 0.33
SRP54-202ENST00000546080 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
SRP54-202ENST00000546080 EIF4A2Q14240 407 aaKnown RBP17.12■□□□□ 0.33
SRP54-202ENST00000546080 G2E3Q7L622 706 aa17.12■□□□□ 0.33
SRP54-202ENST00000546080 C17orf53Q8N3J3 647 aaPredicted RBP17.12■□□□□ 0.33
SRP54-202ENST00000546080 TSC1Q92574 1164 aa17.12■□□□□ 0.33
SRP54-202ENST00000546080 SPTLC3Q9NUV7 552 aa17.12■□□□□ 0.33
SRP54-202ENST00000546080 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
SRP54-202ENST00000546080 DMTNQ08495 405 aa17.11■□□□□ 0.33
SRP54-202ENST00000546080 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
SRP54-202ENST00000546080 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
SRP54-202ENST00000546080 MON2Q7Z3U7 1717 aa17.11■□□□□ 0.33
SRP54-202ENST00000546080 UBE2HP62256 183 aa17.11■□□□□ 0.33
SRP54-202ENST00000546080 TPRNQ4KMQ1 711 aa17.11■□□□□ 0.33
SRP54-202ENST00000546080 KDM4AO75164 1064 aa17.1■□□□□ 0.33
SRP54-202ENST00000546080 EPB41L2O43491 1005 aaKnown RBP17.09■□□□□ 0.33
SRP54-202ENST00000546080 ZSCAN22P10073 491 aaPredicted RBP17.09■□□□□ 0.33
SRP54-202ENST00000546080 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
SRP54-202ENST00000546080 STAP2Q9UGK3 403 aa17.09■□□□□ 0.33
SRP54-202ENST00000546080 CRB1P82279 1406 aa17.09■□□□□ 0.33
SRP54-202ENST00000546080 NEO1Q92859 1461 aa17.09■□□□□ 0.33
SRP54-202ENST00000546080 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
SRP54-202ENST00000546080 GNAI3P08754 354 aa17.09■□□□□ 0.33
SRP54-202ENST00000546080 HSPA4P34932 840 aa17.09■□□□□ 0.33
SRP54-202ENST00000546080 PLCB2Q00722 1185 aa17.09■□□□□ 0.33
SRP54-202ENST00000546080 FBXO31Q5XUX0 539 aaPredicted RBP17.09■□□□□ 0.33
SRP54-202ENST00000546080 PNMA6EA0A0J9YXQ4 647 aa17.08■□□□□ 0.33
SRP54-202ENST00000546080 UNC5CLQ8IV45 518 aa17.08■□□□□ 0.33
SRP54-202ENST00000546080 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.33
SRP54-202ENST00000546080 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.33
SRP54-202ENST00000546080 TSPYL4Q9UJ04 414 aa17.08■□□□□ 0.33
SRP54-202ENST00000546080 ZHX1Q9UKY1 873 aaPredicted RBP17.08■□□□□ 0.33
SRP54-202ENST00000546080 C3P01024 1663 aa17.08■□□□□ 0.32
SRP54-202ENST00000546080 ZSCAN20P17040 1043 aaPredicted RBP17.07■□□□□ 0.32
SRP54-202ENST00000546080 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
SRP54-202ENST00000546080 PPP4R3BQ5MIZ7 849 aa17.07■□□□□ 0.32
SRP54-202ENST00000546080 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
SRP54-202ENST00000546080 AOX1Q06278 1338 aa17.07■□□□□ 0.32
SRP54-202ENST00000546080 STX6O43752 255 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 CBX1P83916 185 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 CHAF1AQ13111 956 aaPredicted RBP17.06■□□□□ 0.32
SRP54-202ENST00000546080 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 BCL2L12Q9HB09 334 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
SRP54-202ENST00000546080 ATP6V1DQ9Y5K8 247 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 FIBPO43427 364 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 CCDC61Q9Y6R9 512 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
SRP54-202ENST00000546080 SETD1AO15047 1707 aaKnown RBP17.05■□□□□ 0.32
SRP54-202ENST00000546080 F13A1P00488 732 aa17.05■□□□□ 0.32
SRP54-202ENST00000546080 TPM3P06753 285 aa17.05■□□□□ 0.32
SRP54-202ENST00000546080 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
SRP54-202ENST00000546080 IL25Q9H293 177 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms