RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ASAP1Q9ULH1 1129 aa21.41■■□□□ 1.02
LIMS2-217ENST00000545738 ZNF521Q96K83 1311 aa21.41■■□□□ 1.02
LIMS2-217ENST00000545738 CCDC27Q2M243 656 aa21.41■■□□□ 1.02
LIMS2-217ENST00000545738 UPF1Q92900 1129 aaKnown RBP eCLIP21.41■■□□□ 1.02
LIMS2-217ENST00000545738 MIS18AQ9NYP9 233 aa21.41■■□□□ 1.02
LIMS2-217ENST00000545738 SLC39A6Q13433 755 aa21.4■■□□□ 1.02
LIMS2-217ENST00000545738 KDM3BQ7LBC6 1761 aa21.39■■□□□ 1.01
LIMS2-217ENST00000545738 KCNQ3O43525 872 aa21.39■■□□□ 1.01
LIMS2-217ENST00000545738 ATG3Q9NT62 314 aa21.39■■□□□ 1.01
LIMS2-217ENST00000545738 LMOD3Q0VAK6 560 aa21.38■■□□□ 1.01
LIMS2-217ENST00000545738 TEFQ10587 303 aa21.38■■□□□ 1.01
LIMS2-217ENST00000545738 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-217ENST00000545738 UBR2Q8IWV8 1755 aa21.38■■□□□ 1.01
LIMS2-217ENST00000545738 LY75O60449 1722 aa21.37■■□□□ 1.01
LIMS2-217ENST00000545738 KCPQ6ZWJ8 1503 aa21.37■■□□□ 1.01
LIMS2-217ENST00000545738 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
LIMS2-217ENST00000545738 HNRNPUQ00839 825 aaKnown RBP eCLIP21.36■■□□□ 1.01
LIMS2-217ENST00000545738 DEFB132Q7Z7B7 95 aa21.36■■□□□ 1.01
LIMS2-217ENST00000545738 APBA3O96018 575 aa21.35■■□□□ 1.01
LIMS2-217ENST00000545738 TAF7Q15545 349 aaPredicted RBP21.35■■□□□ 1.01
LIMS2-217ENST00000545738 PROM2Q8N271 834 aa21.35■■□□□ 1.01
LIMS2-217ENST00000545738 SLC4A9Q96Q91 983 aa21.35■■□□□ 1.01
LIMS2-217ENST00000545738 PALLDQ8WX93 1383 aa21.34■■□□□ 1.01
LIMS2-217ENST00000545738 BTBD11A6QL63 1104 aa21.34■■□□□ 1.01
LIMS2-217ENST00000545738 ZNF853P0CG23 659 aa21.34■■□□□ 1.01
LIMS2-217ENST00000545738 KCNQ4P56696 695 aa21.34■■□□□ 1.01
LIMS2-217ENST00000545738 RGPD3A6NKT7 1758 aaPredicted RBP21.33■■□□□ 1.01
LIMS2-217ENST00000545738 RGPD4Q7Z3J3 1758 aa21.33■■□□□ 1.01
LIMS2-217ENST00000545738 EN1Q05925 392 aaPredicted RBP21.32■■□□□ 1
LIMS2-217ENST00000545738 ZNF790Q6PG37 636 aa21.32■■□□□ 1
LIMS2-217ENST00000545738 CHL1O00533 1208 aa21.32■■□□□ 1
LIMS2-217ENST00000545738 CAMKK2Q96RR4 588 aa21.31■■□□□ 1
LIMS2-217ENST00000545738 LAS1LQ9Y4W2 734 aaKnown RBP21.31■■□□□ 1
LIMS2-217ENST00000545738 PLSCR1O15162 318 aa21.3■■□□□ 1
LIMS2-217ENST00000545738 PTCD1O75127 700 aaKnown RBP21.3■■□□□ 1
LIMS2-217ENST00000545738 EZH2Q15910 746 aaKnown RBP21.3■■□□□ 1
LIMS2-217ENST00000545738 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
LIMS2-217ENST00000545738 ZNF496Q96IT1 587 aaPredicted RBP21.3■■□□□ 1
LIMS2-217ENST00000545738 CFAP44Q96MT7 982 aa21.3■■□□□ 1
LIMS2-217ENST00000545738 MBIPQ9NS73 344 aa21.3■■□□□ 1
LIMS2-217ENST00000545738 LRRC4BQ9NT99 713 aa21.3■■□□□ 1
LIMS2-217ENST00000545738 TJP1Q07157 1748 aa21.3■■□□□ 1
LIMS2-217ENST00000545738 C5P01031 1676 aa21.3■■□□□ 1
LIMS2-217ENST00000545738 RREB1Q92766 1687 aa21.3■■□□□ 1
LIMS2-217ENST00000545738 KRT24Q2M2I5 525 aa21.29■■□□□ 1
LIMS2-217ENST00000545738 NGEFQ8N5V2 710 aa21.29■■□□□ 1
LIMS2-217ENST00000545738 TSR2Q969E8 191 aaKnown RBP21.29■■□□□ 1
LIMS2-217ENST00000545738 WDR63Q8IWG1 891 aa21.29■■□□□ 1
LIMS2-217ENST00000545738 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
LIMS2-217ENST00000545738 TAF1LQ8IZX4 1826 aa21.28■■□□□ 1
LIMS2-217ENST00000545738 PRAMEF22A3QJZ6 481 aa21.28■■□□□ 1
LIMS2-217ENST00000545738 IFT57Q9NWB7 429 aa21.28■■□□□ 1
LIMS2-217ENST00000545738 LOC102724428A0A0B4J2F2 783 aa21.27■■□□□ 1
LIMS2-217ENST00000545738 SIK1P57059 783 aa21.27■■□□□ 1
LIMS2-217ENST00000545738 CCDC125Q86Z20 511 aa21.27■■□□□ 1
LIMS2-217ENST00000545738 IL16Q14005 1332 aa21.27■□□□□ 0.99
LIMS2-217ENST00000545738 ITPK1Q13572 414 aa21.26■□□□□ 0.99
LIMS2-217ENST00000545738 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
LIMS2-217ENST00000545738 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
LIMS2-217ENST00000545738 NUP188Q5SRE5 1749 aa21.26■□□□□ 0.99
LIMS2-217ENST00000545738 CICQ96RK0 1608 aaPredicted RBP21.26■□□□□ 0.99
LIMS2-217ENST00000545738 HEG1Q9ULI3 1381 aa21.26■□□□□ 0.99
LIMS2-217ENST00000545738 EIF4A1P60842 406 aaKnown RBP21.26■□□□□ 0.99
LIMS2-217ENST00000545738 RBM42Q9BTD8 480 aaKnown RBP21.26■□□□□ 0.99
LIMS2-217ENST00000545738 ZNF831Q5JPB2 1677 aa21.26■□□□□ 0.99
LIMS2-217ENST00000545738 ZBED9Q6R2W3 1325 aa21.25■□□□□ 0.99
LIMS2-217ENST00000545738 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
LIMS2-217ENST00000545738 COL5A3P25940 1745 aaPredicted RBP21.25■□□□□ 0.99
LIMS2-217ENST00000545738 SF3B2Q13435 895 aaKnown RBP21.25■□□□□ 0.99
LIMS2-217ENST00000545738 SMARCC1Q92922 1105 aaPredicted RBP21.25■□□□□ 0.99
LIMS2-217ENST00000545738 BAG6P46379 1132 aa21.24■□□□□ 0.99
LIMS2-217ENST00000545738 GNAI1P63096 354 aa21.24■□□□□ 0.99
LIMS2-217ENST00000545738 TTC5Q8N0Z6 440 aa21.24■□□□□ 0.99
LIMS2-217ENST00000545738 BABAM1Q9NWV8 329 aa21.24■□□□□ 0.99
LIMS2-217ENST00000545738 CCNL1Q9UK58 526 aaPredicted RBP21.24■□□□□ 0.99
LIMS2-217ENST00000545738 MYH14Q7Z406 1995 aaKnown RBP21.23■□□□□ 0.99
LIMS2-217ENST00000545738 CALD1Q05682 793 aaKnown RBP21.23■□□□□ 0.99
LIMS2-217ENST00000545738 GOLGA2Q08379 1002 aa21.23■□□□□ 0.99
LIMS2-217ENST00000545738 SLFN5Q08AF3 891 aa21.22■□□□□ 0.99
LIMS2-217ENST00000545738 ATP6V1AP38606 617 aa21.21■□□□□ 0.99
LIMS2-217ENST00000545738 DNAJC10Q8IXB1 793 aa21.21■□□□□ 0.99
LIMS2-217ENST00000545738 LINC00116Q8NCU8 138 aa21.21■□□□□ 0.99
LIMS2-217ENST00000545738 FMNL2Q96PY5 1086 aa21.21■□□□□ 0.99
LIMS2-217ENST00000545738 TRMT2AQ8IZ69 625 aaKnown RBP21.21■□□□□ 0.99
LIMS2-217ENST00000545738 TSPYL6Q8N831 410 aa21.21■□□□□ 0.99
LIMS2-217ENST00000545738 SOCS7O14512 581 aa21.2■□□□□ 0.98
LIMS2-217ENST00000545738 GIGYF1O75420 1035 aaPredicted RBP21.2■□□□□ 0.98
LIMS2-217ENST00000545738 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.98
LIMS2-217ENST00000545738 LAMB4A4D0S4 1761 aa21.19■□□□□ 0.98
LIMS2-217ENST00000545738 C4BP0C0L5 1744 aa21.19■□□□□ 0.98
LIMS2-217ENST00000545738 ANO8Q9HCE9 1232 aaPredicted RBP21.19■□□□□ 0.98
LIMS2-217ENST00000545738 USP16Q9Y5T5 823 aa21.19■□□□□ 0.98
LIMS2-217ENST00000545738 SLC27A3Q5K4L6 730 aa21.18■□□□□ 0.98
LIMS2-217ENST00000545738 DUSP27Q5VZP5 1158 aa21.18■□□□□ 0.98
LIMS2-217ENST00000545738 AMIGO3Q86WK7 504 aa21.18■□□□□ 0.98
LIMS2-217ENST00000545738 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
LIMS2-217ENST00000545738 VSIG10Q8N0Z9 540 aa21.18■□□□□ 0.98
LIMS2-217ENST00000545738 E9PSI1 815 aa21.17■□□□□ 0.98
LIMS2-217ENST00000545738 ELL2O00472 640 aaPredicted RBP21.17■□□□□ 0.98
LIMS2-217ENST00000545738 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms