RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 CNTROBQ8N137 903 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 GPATCH3Q96I76 525 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 NUP62CLQ9H1M0 184 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 ZNF518AQ6AHZ1 1483 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 U2AF2P26368 475 aaKnown RBP eCLIP10.23□□□□□ -0.77
ABCB1-210ENST00000543898 PIBF1Q8WXW3 757 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 ARHGEF5Q12774 1597 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 IBTKQ9P2D0 1353 aaPredicted RBP10.23□□□□□ -0.77
ABCB1-210ENST00000543898 UBE2HP62256 183 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 FILIP1Q7Z7B0 1213 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
ABCB1-210ENST00000543898 PLCH2O75038 1416 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 IFIT2P09913 472 aaKnown RBP10.23□□□□□ -0.77
ABCB1-210ENST00000543898 TNNT1P13805 278 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 SECISBP2LQ93073 1101 aaKnown RBP10.23□□□□□ -0.77
ABCB1-210ENST00000543898 PALD1Q9ULE6 856 aa10.23□□□□□ -0.77
ABCB1-210ENST00000543898 KRT85P78386 507 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 SRCIN1Q9C0H9 1055 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 ATP10AO60312 1499 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 BRD1O95696 1058 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 ZSCAN22P10073 491 aaPredicted RBP10.22□□□□□ -0.77
ABCB1-210ENST00000543898 CPA1P15085 419 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 DNM1Q05193 864 aaKnown RBP10.22□□□□□ -0.77
ABCB1-210ENST00000543898 MAP3K11Q16584 847 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 PDRG1Q9NUG6 133 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 CFAP65Q6ZU64 1925 aaKnown RBP10.22□□□□□ -0.77
ABCB1-210ENST00000543898 KDM4AO75164 1064 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 TXNDC2Q86VQ3 553 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 LIMCH1Q9UPQ0 1083 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 ZDHHC9Q9Y397 364 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 LRRFIP2Q9Y608 721 aaKnown RBP10.22□□□□□ -0.77
ABCB1-210ENST00000543898 CYP46A1Q9Y6A2 500 aa10.22□□□□□ -0.77
ABCB1-210ENST00000543898 RIOK3O14730 519 aaKnown RBP10.21□□□□□ -0.77
ABCB1-210ENST00000543898 CCDC186Q7Z3E2 898 aa10.21□□□□□ -0.77
ABCB1-210ENST00000543898 PDLIM2Q96JY6 352 aa10.21□□□□□ -0.77
ABCB1-210ENST00000543898 CROCC2H7BZ55 1655 aa10.21□□□□□ -0.77
ABCB1-210ENST00000543898 FAM193AP78312 1265 aa10.21□□□□□ -0.77
ABCB1-210ENST00000543898 BCL2L12Q9HB09 334 aa10.21□□□□□ -0.77
ABCB1-210ENST00000543898 SRGAP3O43295 1099 aa10.21□□□□□ -0.78
ABCB1-210ENST00000543898 PTGS1P23219 599 aa10.21□□□□□ -0.78
ABCB1-210ENST00000543898 GJB2P29033 226 aa10.21□□□□□ -0.78
ABCB1-210ENST00000543898 GORABQ5T7V8 394 aa10.21□□□□□ -0.78
ABCB1-210ENST00000543898 PRPF40BQ6NWY9 871 aaKnown RBP10.21□□□□□ -0.78
ABCB1-210ENST00000543898 HOMER1Q86YM7 354 aa10.21□□□□□ -0.78
ABCB1-210ENST00000543898 RAPGEF3O95398 923 aa10.21□□□□□ -0.78
ABCB1-210ENST00000543898 NECAB1Q8N987 351 aa10.21□□□□□ -0.78
ABCB1-210ENST00000543898 C9orf78Q9NZ63 289 aaPredicted RBP10.21□□□□□ -0.78
ABCB1-210ENST00000543898 BCCIPQ9P287 314 aaKnown RBP eCLIP10.21□□□□□ -0.78
ABCB1-210ENST00000543898 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.21□□□□□ -0.78
ABCB1-210ENST00000543898 V9GYY5 206 aaPredicted RBP10.21□□□□□ -0.78
ABCB1-210ENST00000543898 CCDC30Q5VVM6 783 aa10.2□□□□□ -0.78
ABCB1-210ENST00000543898 FMNL2Q96PY5 1086 aa10.2□□□□□ -0.78
ABCB1-210ENST00000543898 TRMT1Q9NXH9 659 aaKnown RBP10.2□□□□□ -0.78
ABCB1-210ENST00000543898 AK9Q5TCS8 1911 aa10.2□□□□□ -0.78
ABCB1-210ENST00000543898 UGGT1Q9NYU2 1555 aa10.2□□□□□ -0.78
ABCB1-210ENST00000543898 CHMLP26374 656 aa10.2□□□□□ -0.78
ABCB1-210ENST00000543898 SPATA32Q96LK8 384 aa10.2□□□□□ -0.78
ABCB1-210ENST00000543898 TRERF1Q96PN7 1200 aa10.2□□□□□ -0.78
ABCB1-210ENST00000543898 ABCC4O15439 1325 aa10.2□□□□□ -0.78
ABCB1-210ENST00000543898 SF3A1Q15459 793 aaKnown RBP10.2□□□□□ -0.78
ABCB1-210ENST00000543898 SYT1P21579 422 aa10.19□□□□□ -0.78
ABCB1-210ENST00000543898 G2E3Q7L622 706 aa10.19□□□□□ -0.78
ABCB1-210ENST00000543898 CLASRPQ8N2M8 674 aaKnown RBP10.19□□□□□ -0.78
ABCB1-210ENST00000543898 NGDNQ8NEJ9 315 aaKnown RBP10.19□□□□□ -0.78
ABCB1-210ENST00000543898 CLEC17AQ6ZS10 378 aa10.19□□□□□ -0.78
ABCB1-210ENST00000543898 CCAR2Q8N163 923 aaKnown RBP10.19□□□□□ -0.78
ABCB1-210ENST00000543898 INTS4Q96HW7 963 aaKnown RBP10.19□□□□□ -0.78
ABCB1-210ENST00000543898 TCEANC2Q96MN5 208 aa10.19□□□□□ -0.78
ABCB1-210ENST00000543898 RTEL1-TNFRSF6BF6WH68 1400 aa10.19□□□□□ -0.78
ABCB1-210ENST00000543898 MSH6P52701 1360 aa10.19□□□□□ -0.78
ABCB1-210ENST00000543898 LUZP1Q86V48 1076 aa10.19□□□□□ -0.78
ABCB1-210ENST00000543898 CD109Q6YHK3 1445 aa10.19□□□□□ -0.78
ABCB1-210ENST00000543898 F13A1P00488 732 aa10.18□□□□□ -0.78
ABCB1-210ENST00000543898 AK2P54819 239 aa10.18□□□□□ -0.78
ABCB1-210ENST00000543898 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
ABCB1-210ENST00000543898 FAM173BQ6P4H8 233 aa10.18□□□□□ -0.78
ABCB1-210ENST00000543898 GTPBP4Q9BZE4 634 aaKnown RBP10.18□□□□□ -0.78
ABCB1-210ENST00000543898 NCOA3Q9Y6Q9 1424 aa10.18□□□□□ -0.78
ABCB1-210ENST00000543898 GNL2Q13823 731 aaKnown RBP10.18□□□□□ -0.78
ABCB1-210ENST00000543898 LMOD2Q6P5Q4 547 aa10.18□□□□□ -0.78
ABCB1-210ENST00000543898 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
ABCB1-210ENST00000543898 PTPRCP08575 1304 aa10.18□□□□□ -0.78
ABCB1-210ENST00000543898 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.18□□□□□ -0.78
ABCB1-210ENST00000543898 PDCP20941 246 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 ANAPC15P60006 121 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 HDGFL1Q5TGJ6 251 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 RNF20Q5VTR2 975 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 DDX11Q96FC9 970 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 SDF4Q9BRK5 362 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 CCDC66A2RUB6 948 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 CCDC73Q6ZRK6 1079 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 TTC37Q6PGP7 1564 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 CYP2E1P05181 493 aaPredicted RBP10.17□□□□□ -0.78
ABCB1-210ENST00000543898 ZNF165P49910 485 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 FLIIQ13045 1269 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 PTPN14Q15678 1187 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 PYCARDQ9ULZ3 195 aa10.17□□□□□ -0.78
ABCB1-210ENST00000543898 ADGRL1O94910 1474 aa10.16□□□□□ -0.78
ABCB1-210ENST00000543898 ANO6Q4KMQ2 910 aa10.16□□□□□ -0.78
ABCB1-210ENST00000543898 NUDT16Q96DE0 195 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms