RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 KAT6BQ8WYB5 2073 aa6.94□□□□□ -1.3
ZEB1-208ENST00000542815 TMF1P82094 1093 aa6.93□□□□□ -1.3
ZEB1-208ENST00000542815 COL11A2P13942 1736 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-208ENST00000542815 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
ZEB1-208ENST00000542815 LAMB1P07942 1786 aa6.93□□□□□ -1.3
ZEB1-208ENST00000542815 SLC12A5Q9H2X9 1139 aa6.93□□□□□ -1.3
ZEB1-208ENST00000542815 PALLDQ8WX93 1383 aa6.93□□□□□ -1.3
ZEB1-208ENST00000542815 HNRNPUQ00839 825 aaKnown RBP eCLIP6.93□□□□□ -1.3
ZEB1-208ENST00000542815 SALL2Q9Y467 1007 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-208ENST00000542815 HSPA5P11021 654 aaKnown RBP6.92□□□□□ -1.3
ZEB1-208ENST00000542815 PPP1R1BQ9UD71 204 aaPredicted RBP6.92□□□□□ -1.3
ZEB1-208ENST00000542815 SCN4AP35499 1836 aa6.92□□□□□ -1.3
ZEB1-208ENST00000542815 ERVV-2B6SEH9 535 aa6.91□□□□□ -1.3
ZEB1-208ENST00000542815 POLD1P28340 1107 aa6.91□□□□□ -1.3
ZEB1-208ENST00000542815 C1QTNF8P60827 252 aa6.91□□□□□ -1.3
ZEB1-208ENST00000542815 RIC1Q4ADV7 1423 aa6.91□□□□□ -1.3
ZEB1-208ENST00000542815 NBPF6Q5VWK0 638 aa6.91□□□□□ -1.3
ZEB1-208ENST00000542815 NBPF4Q96M43 638 aa6.91□□□□□ -1.3
ZEB1-208ENST00000542815 LAMB2P55268 1798 aa6.9□□□□□ -1.3
ZEB1-208ENST00000542815 CSB-PGBD3P0DP91 1061 aa6.9□□□□□ -1.3
ZEB1-208ENST00000542815 TATP17735 454 aaPredicted RBP6.9□□□□□ -1.3
ZEB1-208ENST00000542815 PDGFDQ9GZP0 370 aaPredicted RBP6.9□□□□□ -1.3
ZEB1-208ENST00000542815 ANKRD36CQ5JPF3 1778 aa6.9□□□□□ -1.3
ZEB1-208ENST00000542815 CARD14Q9BXL6 1004 aa6.9□□□□□ -1.31
ZEB1-208ENST00000542815 NLRP2Q9NX02 1062 aa6.9□□□□□ -1.31
ZEB1-208ENST00000542815 LRRC37AA6NMS7 1700 aa6.9□□□□□ -1.31
ZEB1-208ENST00000542815 ST20-MTHFSA0A0A6YYL1 179 aa6.89□□□□□ -1.31
ZEB1-208ENST00000542815 TGFB2P61812 414 aa6.89□□□□□ -1.31
ZEB1-208ENST00000542815 COL23A1Q86Y22 540 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-208ENST00000542815 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
ZEB1-208ENST00000542815 CYP27B1O15528 508 aa6.89□□□□□ -1.31
ZEB1-208ENST00000542815 HSP90AB1P08238 724 aaKnown RBP6.89□□□□□ -1.31
ZEB1-208ENST00000542815 SPG7Q9UQ90 795 aa6.89□□□□□ -1.31
ZEB1-208ENST00000542815 CCDC88AQ3V6T2 1871 aa6.88□□□□□ -1.31
ZEB1-208ENST00000542815 DDX60Q8IY21 1712 aaKnown RBP6.88□□□□□ -1.31
ZEB1-208ENST00000542815 ZBTB7AO95365 584 aa6.88□□□□□ -1.31
ZEB1-208ENST00000542815 PHKG2P15735 406 aa6.88□□□□□ -1.31
ZEB1-208ENST00000542815 CCNL1Q9UK58 526 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-208ENST00000542815 PRIM1P49642 420 aaKnown RBP6.88□□□□□ -1.31
ZEB1-208ENST00000542815 DLG5Q8TDM6 1919 aa6.87□□□□□ -1.31
ZEB1-208ENST00000542815 AMOTQ4VCS5 1084 aa6.87□□□□□ -1.31
ZEB1-208ENST00000542815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.87□□□□□ -1.313e-6■■■■□ 22.7
ZEB1-208ENST00000542815 YBX3P16989 372 aaKnown RBP eCLIP6.86□□□□□ -1.31
ZEB1-208ENST00000542815 POTEDQ86YR6 584 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 FAM9BQ8IZU0 186 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 RAPGEF4Q8WZA2 1011 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 PKNOX2Q96KN3 472 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 PDZRN3Q9UPQ7 1066 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 RBM19Q9Y4C8 960 aaKnown RBP6.86□□□□□ -1.31
ZEB1-208ENST00000542815 DUOX1Q9NRD9 1551 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 AMPHP49418 695 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 POLKQ9UBT6 870 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 NCBP3Q53F19 620 aaKnown RBP6.86□□□□□ -1.31
ZEB1-208ENST00000542815 IFNL2Q8IZJ0 200 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 VSIG10Q8N0Z9 540 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 DCAF5Q96JK2 942 aa6.86□□□□□ -1.31
ZEB1-208ENST00000542815 PIGBQ92521 554 aa6.85□□□□□ -1.31
ZEB1-208ENST00000542815 PRKRIP1Q9H875 184 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-208ENST00000542815 ATF5Q9Y2D1 282 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-208ENST00000542815 PSME4Q14997 1843 aa6.85□□□□□ -1.31
ZEB1-208ENST00000542815 LINC00116Q8NCU8 138 aa6.85□□□□□ -1.31
ZEB1-208ENST00000542815 IBTKQ9P2D0 1353 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-208ENST00000542815 LTBP3Q9NS15 1303 aa6.84□□□□□ -1.31
ZEB1-208ENST00000542815 ACSBG1Q96GR2 724 aa6.84□□□□□ -1.31
ZEB1-208ENST00000542815 ATG3Q9NT62 314 aa6.84□□□□□ -1.31
ZEB1-208ENST00000542815 SNED1Q8TER0 1413 aa6.84□□□□□ -1.31
ZEB1-208ENST00000542815 RPS6KA4O75676 772 aa6.84□□□□□ -1.31
ZEB1-208ENST00000542815 EYA1Q99502 592 aa6.84□□□□□ -1.31
ZEB1-208ENST00000542815 LOC102724428A0A0B4J2F2 783 aa6.84□□□□□ -1.32
ZEB1-208ENST00000542815 GIGYF1O75420 1035 aaPredicted RBP6.84□□□□□ -1.32
ZEB1-208ENST00000542815 SIK1P57059 783 aa6.84□□□□□ -1.32
ZEB1-208ENST00000542815 IFFO2Q5TF58 517 aa6.84□□□□□ -1.32
ZEB1-208ENST00000542815 NLGN2Q8NFZ4 835 aa6.84□□□□□ -1.32
ZEB1-208ENST00000542815 RBM46Q8TBY0 533 aaKnown RBP6.84□□□□□ -1.32
ZEB1-208ENST00000542815 EIF4A2Q14240 407 aaKnown RBP6.83□□□□□ -1.32
ZEB1-208ENST00000542815 HSP90AB2PQ58FF8 381 aa6.83□□□□□ -1.32
ZEB1-208ENST00000542815 JMYQ8N9B5 988 aa6.83□□□□□ -1.32
ZEB1-208ENST00000542815 POLR3GLQ9BT43 218 aa6.83□□□□□ -1.32
ZEB1-208ENST00000542815 TFCP2L1Q9NZI6 479 aa6.83□□□□□ -1.32
ZEB1-208ENST00000542815 ZNF646O15015 1829 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-208ENST00000542815 CEMIPQ8WUJ3 1361 aa6.83□□□□□ -1.32
ZEB1-208ENST00000542815 IRX6P78412 446 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-208ENST00000542815 FSTL1Q12841 308 aa6.83□□□□□ -1.32
ZEB1-208ENST00000542815 PPP4R2Q9NY27 417 aa6.83□□□□□ -1.32
ZEB1-208ENST00000542815 NUP98P52948 1817 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 ITPK1Q13572 414 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 NLGN1Q8N2Q7 840 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 LTBP1Q14766 1721 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 TRPM7Q96QT4 1865 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 KIF3CO14782 793 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 KCNA3P22001 575 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 TM4SF1P30408 202 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 TMC1Q8TDI8 760 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 CACNA1SQ13698 1873 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 SOS1Q07889 1333 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-208ENST00000542815 USP42Q9H9J4 1324 aaKnown RBP6.82□□□□□ -1.32
ZEB1-208ENST00000542815 HSPA6P17066 643 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 IL13P35225 146 aa6.82□□□□□ -1.32
ZEB1-208ENST00000542815 SLC4A9Q96Q91 983 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms