RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZSCAN20P17040 1043 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-219ENST00000542112 NCOA4Q13772 614 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 EML3Q32P44 896 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 LINC01559Q495D7 138 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 ERFEQ4G0M1 354 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 HS1BP3Q53T59 392 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 B4GALNT3Q6L9W6 998 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 LARP1Q6PKG0 1096 aaKnown RBP5.44□□□□□ -1.54
SNHG1-219ENST00000542112 NBPF11Q86T75 865 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 TRIM50Q86XT4 487 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 FOXJ1Q92949 421 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 C1QTNF2Q9BXJ5 285 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 BSDC1Q9NW68 430 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-219ENST00000542112 PCDH10Q9P2E7 1040 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 MKRN1Q9UHC7 482 aaKnown RBP5.44□□□□□ -1.54
SNHG1-219ENST00000542112 DNMBPQ6XZF7 1577 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 FSD2A1L4K1 749 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 TMEM88BA6NKF7 163 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 TTC36A6NLP5 189 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 CALRP27797 417 aaKnown RBP5.43□□□□□ -1.54
SNHG1-219ENST00000542112 NBPF1Q3BBV0 1214 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 TRAF7Q6Q0C0 670 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 TRMT44Q8IYL2 757 aaKnown RBP5.43□□□□□ -1.54
SNHG1-219ENST00000542112 ANKLE1Q8NAG6 615 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 RNF166Q96A37 237 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-219ENST00000542112 CARD10Q9BWT7 1032 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 NOVA2Q9UNW9 492 aaKnown RBP5.43□□□□□ -1.54
SNHG1-219ENST00000542112 DOLKQ9UPQ8 538 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 RNF123Q5XPI4 1314 aa5.43□□□□□ -1.54
SNHG1-219ENST00000542112 SOGA1O94964 1423 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L15C9J2P7 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L10C9JJH3 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L13C9JLJ4 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L12C9JPN9 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L11C9JVI0 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L21D6R901 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L18D6R9N7 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L22D6RA61 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L17D6RBQ6 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L19D6RCP7 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L20D6RJB6 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 RNF223E7ERA6 249 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 RASA1P20936 1047 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 ATP1A2P50993 1020 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 WNT7BP56706 349 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 SH3BP2P78314 561 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 USP17L24Q0WX57 530 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 CASC1Q6TDU7 716 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 SEPT12Q8IYM1 358 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 DEPDC4Q8N2C3 294 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 SIRT1Q96EB6 747 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 BACH2Q9BYV9 841 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 RAI14Q9P0K7 980 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 NOD1Q9Y239 953 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 FANCD2Q9BXW9 1451 aa5.42□□□□□ -1.54
SNHG1-219ENST00000542112 KIF21BO75037 1637 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 GIGYF1O75420 1035 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-219ENST00000542112 VARSP26640 1264 aaKnown RBP5.41□□□□□ -1.54
SNHG1-219ENST00000542112 MCM5P33992 734 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 SSR1P43307 286 aaKnown RBP5.41□□□□□ -1.54
SNHG1-219ENST00000542112 RPIAP49247 311 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 TRIM32Q13049 653 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 PTK7Q13308 1070 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 NBPF9Q3BBW0 867 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 C4orf48Q5BLP8 95 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 KIAA1211Q6ZU35 1233 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 GPATCH11Q8N954 259 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 TRIM52Q96A61 297 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 MYH16Q9H6N6 1097 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 KCNG1Q9UIX4 513 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 ZMIZ1Q9ULJ6 1067 aa5.41□□□□□ -1.54
SNHG1-219ENST00000542112 URB2Q14146 1524 aaKnown RBP5.41□□□□□ -1.54
SNHG1-219ENST00000542112 TOPBP1Q92547 1522 aa5.4□□□□□ -1.54
SNHG1-219ENST00000542112 PPEF1O14829 653 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-219ENST00000542112 CRTC2Q53ET0 693 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-219ENST00000542112 TMEM164Q5U3C3 297 aa5.4□□□□□ -1.54
SNHG1-219ENST00000542112 EGFL6Q8IUX8 553 aa5.4□□□□□ -1.54
SNHG1-219ENST00000542112 FAM200AQ8TCP9 573 aa5.4□□□□□ -1.54
SNHG1-219ENST00000542112 CCDC85AQ96PX6 553 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-219ENST00000542112 CDCA7Q9BWT1 371 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-219ENST00000542112 ZHX1Q9UKY1 873 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-219ENST00000542112 KIF3AQ9Y496 699 aa5.4□□□□□ -1.54
SNHG1-219ENST00000542112 MAP4K5Q9Y4K4 846 aa5.4□□□□□ -1.54
SNHG1-219ENST00000542112 CCDC144AA2RUR9 1427 aa5.4□□□□□ -1.55
SNHG1-219ENST00000542112 SCAPERQ9BY12 1400 aa5.4□□□□□ -1.55
SNHG1-219ENST00000542112 KIF1CO43896 1103 aaKnown RBP5.39□□□□□ -1.55
SNHG1-219ENST00000542112 MFAP1P55081 439 aaKnown RBP5.39□□□□□ -1.55
SNHG1-219ENST00000542112 ANAPC15P60006 121 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 SATB1Q01826 763 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 GABPB1Q06547 395 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-219ENST00000542112 USP4Q13107 963 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 ANKMY2Q8IV38 441 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 LARGE2Q8N3Y3 721 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 OGFOD1Q8N543 542 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 STK32AQ8WU08 396 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 BRMS1Q9HCU9 246 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.39□□□□□ -1.55
SNHG1-219ENST00000542112 DNAAF2Q9NVR5 837 aaKnown RBP5.39□□□□□ -1.55
SNHG1-219ENST00000542112 CUX2O14529 1486 aa5.39□□□□□ -1.55
SNHG1-219ENST00000542112 FGD5Q6ZNL6 1462 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms