RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 WDR33Q9C0J8 1336 aaKnown RBP21.32■■□□□ 1
RAB40C-205ENST00000539661 CHL1O00533 1208 aa21.32■■□□□ 1
RAB40C-205ENST00000539661 APBB1O00213 710 aa21.31■■□□□ 1
RAB40C-205ENST00000539661 UTP14CQ5TAP6 766 aaKnown RBP21.31■■□□□ 1
RAB40C-205ENST00000539661 DNTTIP2Q5QJE6 756 aaKnown RBP21.31■■□□□ 1
RAB40C-205ENST00000539661 SALL3Q9BXA9 1300 aa21.3■■□□□ 1
RAB40C-205ENST00000539661 NCKAP5LQ9HCH0 1330 aa21.3■■□□□ 1
RAB40C-205ENST00000539661 NOLC1Q14978 699 aaKnown RBP eCLIP21.3■■□□□ 1
RAB40C-205ENST00000539661 NRKQ7Z2Y5 1582 aa21.29■■□□□ 1
RAB40C-205ENST00000539661 CCDC183Q5T5S1 534 aa21.29■■□□□ 1
RAB40C-205ENST00000539661 DCTN1Q14203 1278 aa21.28■■□□□ 1
RAB40C-205ENST00000539661 SPTLC3Q9NUV7 552 aa21.28■■□□□ 1
RAB40C-205ENST00000539661 USP48Q86UV5 1035 aa21.28■■□□□ 1
RAB40C-205ENST00000539661 CCT4P50991 539 aaKnown RBP21.27■■□□□ 1
RAB40C-205ENST00000539661 CEBPAP49715 358 aaPredicted RBP21.27■■□□□ 1
RAB40C-205ENST00000539661 GADD45BO75293 160 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-205ENST00000539661 PLEKHG5O94827 1062 aa21.26■□□□□ 0.99
RAB40C-205ENST00000539661 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
RAB40C-205ENST00000539661 CHMLP26374 656 aa21.25■□□□□ 0.99
RAB40C-205ENST00000539661 DMTNQ08495 405 aa21.25■□□□□ 0.99
RAB40C-205ENST00000539661 COG3Q96JB2 828 aa21.25■□□□□ 0.99
RAB40C-205ENST00000539661 FKBP5Q13451 457 aaPredicted RBP21.25■□□□□ 0.99
RAB40C-205ENST00000539661 KRT24Q2M2I5 525 aa21.25■□□□□ 0.99
RAB40C-205ENST00000539661 NME9Q86XW9 330 aa21.25■□□□□ 0.99
RAB40C-205ENST00000539661 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.25■□□□□ 0.99
RAB40C-205ENST00000539661 MON2Q7Z3U7 1717 aa21.25■□□□□ 0.99
RAB40C-205ENST00000539661 MX1P20591 662 aa21.25■□□□□ 0.99
RAB40C-205ENST00000539661 SRCIN1Q9C0H9 1055 aa21.25■□□□□ 0.99
RAB40C-205ENST00000539661 RPAP1Q9BWH6 1393 aaPredicted RBP21.24■□□□□ 0.99
RAB40C-205ENST00000539661 LRRCC1Q9C099 1032 aa21.24■□□□□ 0.99
RAB40C-205ENST00000539661 ADCY5O95622 1261 aa21.24■□□□□ 0.99
RAB40C-205ENST00000539661 ANO2Q9NQ90 1003 aa21.24■□□□□ 0.99
RAB40C-205ENST00000539661 STAP2Q9UGK3 403 aa21.24■□□□□ 0.99
RAB40C-205ENST00000539661 USP25Q9UHP3 1055 aa21.24■□□□□ 0.99
RAB40C-205ENST00000539661 GNAI2P04899 355 aa21.23■□□□□ 0.99
RAB40C-205ENST00000539661 NUTM2FA1L443 756 aa21.23■□□□□ 0.99
RAB40C-205ENST00000539661 TPM3P06753 285 aa21.23■□□□□ 0.99
RAB40C-205ENST00000539661 ZNF710Q8N1W2 664 aa21.23■□□□□ 0.99
RAB40C-205ENST00000539661 KIF3AQ9Y496 699 aa21.23■□□□□ 0.99
RAB40C-205ENST00000539661 AOX1Q06278 1338 aa21.22■□□□□ 0.99
RAB40C-205ENST00000539661 SLC4A2P04920 1241 aa21.22■□□□□ 0.99
RAB40C-205ENST00000539661 ARHGEF10O15013 1369 aa21.22■□□□□ 0.99
RAB40C-205ENST00000539661 UBE2HP62256 183 aa21.21■□□□□ 0.99
RAB40C-205ENST00000539661 TXNDC2Q86VQ3 553 aa21.21■□□□□ 0.99
RAB40C-205ENST00000539661 GDPD2Q9HCC8 539 aa21.21■□□□□ 0.99
RAB40C-205ENST00000539661 KDM4AO75164 1064 aa21.2■□□□□ 0.98
RAB40C-205ENST00000539661 C3P01024 1663 aa21.2■□□□□ 0.98
RAB40C-205ENST00000539661 ZSCAN20P17040 1043 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-205ENST00000539661 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
RAB40C-205ENST00000539661 RRS1Q15050 365 aaKnown RBP21.19■□□□□ 0.98
RAB40C-205ENST00000539661 GTPBP4Q9BZE4 634 aaKnown RBP21.19■□□□□ 0.98
RAB40C-205ENST00000539661 CRB1P82279 1406 aa21.19■□□□□ 0.98
RAB40C-205ENST00000539661 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
RAB40C-205ENST00000539661 HSPA4P34932 840 aa21.19■□□□□ 0.98
RAB40C-205ENST00000539661 ZNF830Q96NB3 372 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-205ENST00000539661 ARID3AQ99856 593 aa21.19■□□□□ 0.98
RAB40C-205ENST00000539661 TTC12Q9H892 705 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-205ENST00000539661 ATP6V1DQ9Y5K8 247 aa21.19■□□□□ 0.98
RAB40C-205ENST00000539661 TCHHQ07283 1943 aa21.18■□□□□ 0.98
RAB40C-205ENST00000539661 WASLO00401 505 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-205ENST00000539661 NOL8Q76FK4 1167 aaKnown RBP21.18■□□□□ 0.98
RAB40C-205ENST00000539661 EXOC6BQ9Y2D4 811 aa21.18■□□□□ 0.98
RAB40C-205ENST00000539661 CPS1P31327 1500 aa21.18■□□□□ 0.98
RAB40C-205ENST00000539661 AKAP12Q02952 1782 aa21.18■□□□□ 0.98
RAB40C-205ENST00000539661 AGLP35573 1532 aa21.18■□□□□ 0.98
RAB40C-205ENST00000539661 TRIM6-TRIM34B2RNG4 842 aa21.18■□□□□ 0.98
RAB40C-205ENST00000539661 ZSCAN22P10073 491 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-205ENST00000539661 DIAPH3Q9NSV4 1193 aa21.18■□□□□ 0.98
RAB40C-205ENST00000539661 ZRANB1Q9UGI0 708 aa21.18■□□□□ 0.98
RAB40C-205ENST00000539661 GNAI3P08754 354 aa21.17■□□□□ 0.98
RAB40C-205ENST00000539661 RILPL2Q969X0 211 aa21.17■□□□□ 0.98
RAB40C-205ENST00000539661 HCLS1P14317 486 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-205ENST00000539661 SULT6B1Q6IMI4 303 aa21.17■□□□□ 0.98
RAB40C-205ENST00000539661 UPF3BQ9BZI7 483 aaKnown RBP21.17■□□□□ 0.98
RAB40C-205ENST00000539661 ATP8B2P98198 1209 aa21.16■□□□□ 0.98
RAB40C-205ENST00000539661 MCM10Q7L590 875 aa21.16■□□□□ 0.98
RAB40C-205ENST00000539661 FUCA2Q9BTY2 467 aa21.16■□□□□ 0.98
RAB40C-205ENST00000539661 ESF1Q9H501 851 aaKnown RBP21.16■□□□□ 0.98
RAB40C-205ENST00000539661 EIF4A2Q14240 407 aaKnown RBP21.15■□□□□ 0.98
RAB40C-205ENST00000539661 SLC4A10Q6U841 1118 aa21.15■□□□□ 0.98
RAB40C-205ENST00000539661 PRDM10Q9NQV6 1147 aa21.15■□□□□ 0.98
RAB40C-205ENST00000539661 CHAF1AQ13111 956 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-205ENST00000539661 TSHZ3Q63HK5 1081 aa21.15■□□□□ 0.98
RAB40C-205ENST00000539661 KIAA1524Q8TCG1 905 aa21.15■□□□□ 0.98
RAB40C-205ENST00000539661 CNPY2Q9Y2B0 182 aa21.15■□□□□ 0.98
RAB40C-205ENST00000539661 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-205ENST00000539661 METP08581 1390 aa21.15■□□□□ 0.98
RAB40C-205ENST00000539661 ITSN1Q15811 1721 aa21.15■□□□□ 0.98
RAB40C-205ENST00000539661 KIF13AQ9H1H9 1805 aa21.14■□□□□ 0.98
RAB40C-205ENST00000539661 FOXD4L6Q3SYB3 417 aaPredicted RBP21.14■□□□□ 0.98
RAB40C-205ENST00000539661 FOXD4L3Q6VB84 417 aaPredicted RBP21.14■□□□□ 0.98
RAB40C-205ENST00000539661 AEBP1Q8IUX7 1158 aa21.14■□□□□ 0.98
RAB40C-205ENST00000539661 RGPD1P0DJD0 1748 aa21.14■□□□□ 0.97
RAB40C-205ENST00000539661 BCL2L12Q9HB09 334 aa21.13■□□□□ 0.97
RAB40C-205ENST00000539661 A2ML1A8K2U0 1454 aa21.13■□□□□ 0.97
RAB40C-205ENST00000539661 STX6O43752 255 aa21.13■□□□□ 0.97
RAB40C-205ENST00000539661 G2E3Q7L622 706 aa21.13■□□□□ 0.97
RAB40C-205ENST00000539661 GOLGA6L6A8MZA4 724 aa21.12■□□□□ 0.97
RAB40C-205ENST00000539661 PPP4R3BQ5MIZ7 849 aa21.12■□□□□ 0.97
RAB40C-205ENST00000539661 F6X3S4 739 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms