RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CABP4P57796 275 aa22.51■■□□□ 1.19
CLN6-202ENST00000538696 UBR2Q8IWV8 1755 aa22.51■■□□□ 1.19
CLN6-202ENST00000538696 PTF1AQ7RTS3 328 aa22.5■■□□□ 1.19
CLN6-202ENST00000538696 TEFQ10587 303 aa22.49■■□□□ 1.19
CLN6-202ENST00000538696 SYTL4Q96C24 671 aaPredicted RBP22.49■■□□□ 1.19
CLN6-202ENST00000538696 TMOD3Q9NYL9 352 aa22.49■■□□□ 1.19
CLN6-202ENST00000538696 NFATC2IPQ8NCF5 419 aa22.48■■□□□ 1.19
CLN6-202ENST00000538696 PIGBQ92521 554 aa22.48■■□□□ 1.19
CLN6-202ENST00000538696 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
CLN6-202ENST00000538696 CDCA7LQ96GN5 454 aa22.47■■□□□ 1.19
CLN6-202ENST00000538696 LY75O60449 1722 aa22.46■■□□□ 1.19
CLN6-202ENST00000538696 TRIM37O94972 964 aa22.46■■□□□ 1.19
CLN6-202ENST00000538696 EP400Q96L91 3159 aa22.45■■□□□ 1.18
CLN6-202ENST00000538696 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
CLN6-202ENST00000538696 BCL11BQ9C0K0 894 aaPredicted RBP22.45■■□□□ 1.18
CLN6-202ENST00000538696 GTF3C3Q9Y5Q9 886 aa22.45■■□□□ 1.18
CLN6-202ENST00000538696 CALD1Q05682 793 aaKnown RBP22.44■■□□□ 1.18
CLN6-202ENST00000538696 TAF7Q15545 349 aaPredicted RBP22.44■■□□□ 1.18
CLN6-202ENST00000538696 KCPQ6ZWJ8 1503 aa22.44■■□□□ 1.18
CLN6-202ENST00000538696 RGPD3A6NKT7 1758 aaPredicted RBP22.44■■□□□ 1.18
CLN6-202ENST00000538696 RGPD4Q7Z3J3 1758 aa22.44■■□□□ 1.18
CLN6-202ENST00000538696 IL16Q14005 1332 aa22.44■■□□□ 1.18
CLN6-202ENST00000538696 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
CLN6-202ENST00000538696 IFT57Q9NWB7 429 aa22.42■■□□□ 1.18
CLN6-202ENST00000538696 MIS18AQ9NYP9 233 aa22.42■■□□□ 1.18
CLN6-202ENST00000538696 BTBD11A6QL63 1104 aa22.41■■□□□ 1.18
CLN6-202ENST00000538696 SLC39A6Q13433 755 aa22.41■■□□□ 1.18
CLN6-202ENST00000538696 CFAP44Q96MT7 982 aa22.41■■□□□ 1.18
CLN6-202ENST00000538696 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
CLN6-202ENST00000538696 LAS1LQ9Y4W2 734 aaKnown RBP22.41■■□□□ 1.18
CLN6-202ENST00000538696 GOLGA2Q08379 1002 aa22.4■■□□□ 1.18
CLN6-202ENST00000538696 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
CLN6-202ENST00000538696 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
CLN6-202ENST00000538696 C5P01031 1676 aa22.4■■□□□ 1.18
CLN6-202ENST00000538696 CICQ96RK0 1608 aaPredicted RBP22.39■■□□□ 1.18
CLN6-202ENST00000538696 CHL1O00533 1208 aa22.39■■□□□ 1.18
CLN6-202ENST00000538696 KCNQ3O43525 872 aa22.39■■□□□ 1.18
CLN6-202ENST00000538696 GNAI1P63096 354 aa22.39■■□□□ 1.18
CLN6-202ENST00000538696 BABAM1Q9NWV8 329 aa22.39■■□□□ 1.18
CLN6-202ENST00000538696 TSPYL4Q9UJ04 414 aa22.39■■□□□ 1.18
CLN6-202ENST00000538696 ZNF831Q5JPB2 1677 aa22.39■■□□□ 1.18
CLN6-202ENST00000538696 TJP1Q07157 1748 aa22.39■■□□□ 1.17
CLN6-202ENST00000538696 PALLDQ8WX93 1383 aa22.39■■□□□ 1.17
CLN6-202ENST00000538696 MBIPQ9NS73 344 aa22.38■■□□□ 1.17
CLN6-202ENST00000538696 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
CLN6-202ENST00000538696 ZNF790Q6PG37 636 aa22.37■■□□□ 1.17
CLN6-202ENST00000538696 SLFN5Q08AF3 891 aa22.36■■□□□ 1.17
CLN6-202ENST00000538696 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
CLN6-202ENST00000538696 SUPT16HQ9Y5B9 1047 aaKnown RBP22.36■■□□□ 1.17
CLN6-202ENST00000538696 FANCIQ9NVI1 1328 aa22.36■■□□□ 1.17
CLN6-202ENST00000538696 TAF1LQ8IZX4 1826 aa22.36■■□□□ 1.17
CLN6-202ENST00000538696 TTC5Q8N0Z6 440 aa22.35■■□□□ 1.17
CLN6-202ENST00000538696 SMARCC1Q92922 1105 aaPredicted RBP22.35■■□□□ 1.17
CLN6-202ENST00000538696 RREB1Q92766 1687 aa22.35■■□□□ 1.17
CLN6-202ENST00000538696 COL5A3P25940 1745 aaPredicted RBP22.35■■□□□ 1.17
CLN6-202ENST00000538696 E9PSI1 815 aa22.34■■□□□ 1.17
CLN6-202ENST00000538696 DUSP27Q5VZP5 1158 aa22.34■■□□□ 1.17
CLN6-202ENST00000538696 APBA3O96018 575 aa22.33■■□□□ 1.17
CLN6-202ENST00000538696 EIF4A1P60842 406 aaKnown RBP22.32■■□□□ 1.16
CLN6-202ENST00000538696 TRMT2AQ8IZ69 625 aaKnown RBP22.32■■□□□ 1.16
CLN6-202ENST00000538696 ZNF496Q96IT1 587 aaPredicted RBP22.32■■□□□ 1.16
CLN6-202ENST00000538696 MYH16Q9H6N6 1097 aa22.32■■□□□ 1.16
CLN6-202ENST00000538696 HEG1Q9ULI3 1381 aa22.32■■□□□ 1.16
CLN6-202ENST00000538696 PTCD1O75127 700 aaKnown RBP22.31■■□□□ 1.16
CLN6-202ENST00000538696 UPF1Q92900 1129 aaKnown RBP eCLIP22.31■■□□□ 1.16
CLN6-202ENST00000538696 FMNL2Q96PY5 1086 aa22.31■■□□□ 1.16
CLN6-202ENST00000538696 SLC4A9Q96Q91 983 aa22.31■■□□□ 1.16
CLN6-202ENST00000538696 NUP188Q5SRE5 1749 aa22.3■■□□□ 1.16
CLN6-202ENST00000538696 PLSCR1O15162 318 aa22.3■■□□□ 1.16
CLN6-202ENST00000538696 SF3B2Q13435 895 aaKnown RBP22.3■■□□□ 1.16
CLN6-202ENST00000538696 KRT24Q2M2I5 525 aa22.3■■□□□ 1.16
CLN6-202ENST00000538696 RBM42Q9BTD8 480 aaKnown RBP22.3■■□□□ 1.16
CLN6-202ENST00000538696 LOC102724428A0A0B4J2F2 783 aa22.29■■□□□ 1.16
CLN6-202ENST00000538696 SIK1P57059 783 aa22.29■■□□□ 1.16
CLN6-202ENST00000538696 CCDC125Q86Z20 511 aa22.29■■□□□ 1.16
CLN6-202ENST00000538696 PRAMEF22A3QJZ6 481 aa22.26■■□□□ 1.15
CLN6-202ENST00000538696 BAG6P46379 1132 aa22.26■■□□□ 1.15
CLN6-202ENST00000538696 EN1Q05925 392 aaPredicted RBP22.26■■□□□ 1.15
CLN6-202ENST00000538696 EXOSC9Q06265 439 aaKnown RBP22.26■■□□□ 1.15
CLN6-202ENST00000538696 DEFB132Q7Z7B7 95 aa22.26■■□□□ 1.15
CLN6-202ENST00000538696 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
CLN6-202ENST00000538696 C8orf58Q8NAV2 365 aa22.26■■□□□ 1.15
CLN6-202ENST00000538696 CCNL1Q9UK58 526 aaPredicted RBP22.26■■□□□ 1.15
CLN6-202ENST00000538696 RCAN3Q9UKA8 241 aa22.26■■□□□ 1.15
CLN6-202ENST00000538696 MYH14Q7Z406 1995 aaKnown RBP22.25■■□□□ 1.15
CLN6-202ENST00000538696 GIGYF1O75420 1035 aaPredicted RBP22.25■■□□□ 1.15
CLN6-202ENST00000538696 NEFLP07196 543 aa22.25■■□□□ 1.15
CLN6-202ENST00000538696 C4BP0C0L5 1744 aa22.25■■□□□ 1.15
CLN6-202ENST00000538696 KCNQ4P56696 695 aa22.25■■□□□ 1.15
CLN6-202ENST00000538696 ITPK1Q13572 414 aa22.25■■□□□ 1.15
CLN6-202ENST00000538696 TXNRD1Q16881 649 aa22.25■■□□□ 1.15
CLN6-202ENST00000538696 PROM2Q8N271 834 aa22.25■■□□□ 1.15
CLN6-202ENST00000538696 CAMKK2Q96RR4 588 aa22.25■■□□□ 1.15
CLN6-202ENST00000538696 SNRPA1P09661 255 aaKnown RBP22.24■■□□□ 1.15
CLN6-202ENST00000538696 ATP6V1AP38606 617 aa22.24■■□□□ 1.15
CLN6-202ENST00000538696 EZH2Q15910 746 aaKnown RBP22.24■■□□□ 1.15
CLN6-202ENST00000538696 DNAJC10Q8IXB1 793 aa22.24■■□□□ 1.15
CLN6-202ENST00000538696 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
CLN6-202ENST00000538696 RNF123Q5XPI4 1314 aa22.23■■□□□ 1.15
CLN6-202ENST00000538696 SLC27A3Q5K4L6 730 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms