RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
CPSF7-218ENST00000537641 C16orf71Q8IYS4 520 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-218ENST00000537641 NOL7Q9UMY1 257 aaKnown RBP14.86□□□□□ -0.03
CPSF7-218ENST00000537641 CHD2O14647 1828 aaKnown RBP14.86□□□□□ -0.03
CPSF7-218ENST00000537641 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
CPSF7-218ENST00000537641 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
CPSF7-218ENST00000537641 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
CPSF7-218ENST00000537641 MCM5P33992 734 aa14.86□□□□□ -0.03
CPSF7-218ENST00000537641 SULT6B1Q6IMI4 303 aa14.86□□□□□ -0.03
CPSF7-218ENST00000537641 LRSAM1Q6UWE0 723 aa14.86□□□□□ -0.03
CPSF7-218ENST00000537641 RBSNQ9H1K0 784 aa14.86□□□□□ -0.03
CPSF7-218ENST00000537641 MARF1Q9Y4F3 1742 aaKnown RBP14.85□□□□□ -0.03
CPSF7-218ENST00000537641 OTUD7AQ8TE49 926 aaPredicted RBP14.85□□□□□ -0.03
CPSF7-218ENST00000537641 PDCL3Q9H2J4 239 aa14.85□□□□□ -0.03
CPSF7-218ENST00000537641 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
CPSF7-218ENST00000537641 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
CPSF7-218ENST00000537641 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
CPSF7-218ENST00000537641 GPT2Q8TD30 523 aa14.84□□□□□ -0.03
CPSF7-218ENST00000537641 ZDHHC9Q9Y397 364 aa14.84□□□□□ -0.03
CPSF7-218ENST00000537641 FLT4P35916 1363 aa14.84□□□□□ -0.03
CPSF7-218ENST00000537641 PKP1Q13835 747 aa14.83□□□□□ -0.03
CPSF7-218ENST00000537641 DCTN1Q14203 1278 aa14.83□□□□□ -0.03
CPSF7-218ENST00000537641 ZGPATQ8N5A5 531 aaKnown RBP14.83□□□□□ -0.03
CPSF7-218ENST00000537641 FAM208AQ9UK61 1670 aaKnown RBP14.83□□□□□ -0.04
CPSF7-218ENST00000537641 PRPF40AO75400 957 aaKnown RBP14.83□□□□□ -0.04
CPSF7-218ENST00000537641 PRIM1P49642 420 aaKnown RBP14.83□□□□□ -0.04
CPSF7-218ENST00000537641 CRB1P82279 1406 aa14.83□□□□□ -0.04
CPSF7-218ENST00000537641 HSP90AB2PQ58FF8 381 aa14.83□□□□□ -0.04
CPSF7-218ENST00000537641 MEIS3Q99687 375 aa14.83□□□□□ -0.04
CPSF7-218ENST00000537641 MAP3K19Q56UN5 1328 aa14.82□□□□□ -0.04
CPSF7-218ENST00000537641 SMARCA5O60264 1052 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-218ENST00000537641 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-218ENST00000537641 MCCP23508 829 aa14.82□□□□□ -0.04
CPSF7-218ENST00000537641 CCT4P50991 539 aaKnown RBP14.82□□□□□ -0.04
CPSF7-218ENST00000537641 ANAPC15P60006 121 aa14.82□□□□□ -0.04
CPSF7-218ENST00000537641 CUL4AQ13619 759 aa14.82□□□□□ -0.04
CPSF7-218ENST00000537641 CSPP1Q1MSJ5 1256 aa14.82□□□□□ -0.04
CPSF7-218ENST00000537641 IL17RAQ96F46 866 aa14.82□□□□□ -0.04
CPSF7-218ENST00000537641 KCNA6P17658 529 aa14.81□□□□□ -0.04
CPSF7-218ENST00000537641 PDE1AP54750 535 aa14.81□□□□□ -0.04
CPSF7-218ENST00000537641 CCDC39Q9UFE4 941 aa14.81□□□□□ -0.04
CPSF7-218ENST00000537641 ZKSCAN5Q9Y2L8 839 aa14.81□□□□□ -0.04
CPSF7-218ENST00000537641 LRRC37A3O60309 1634 aa14.81□□□□□ -0.04
CPSF7-218ENST00000537641 SALL3Q9BXA9 1300 aa14.81□□□□□ -0.04
CPSF7-218ENST00000537641 EPB41L2O43491 1005 aaKnown RBP14.8□□□□□ -0.04
CPSF7-218ENST00000537641 BRD1O95696 1058 aa14.8□□□□□ -0.04
CPSF7-218ENST00000537641 INTS4Q96HW7 963 aaKnown RBP14.8□□□□□ -0.04
CPSF7-218ENST00000537641 MAP7D2Q96T17 732 aa14.8□□□□□ -0.04
CPSF7-218ENST00000537641 KDRP35968 1356 aa14.8□□□□□ -0.04
CPSF7-218ENST00000537641 TMEM63CQ9P1W3 806 aa14.8□□□□□ -0.04
CPSF7-218ENST00000537641 RBM27Q9P2N5 1060 aaKnown RBP14.8□□□□□ -0.04
CPSF7-218ENST00000537641 ADAMTSL3P82987 1691 aa14.79□□□□□ -0.04
CPSF7-218ENST00000537641 SYAP1Q96A49 352 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-218ENST00000537641 TMX3Q96JJ7 454 aa14.79□□□□□ -0.04
CPSF7-218ENST00000537641 ESYT1Q9BSJ8 1104 aa14.79□□□□□ -0.04
CPSF7-218ENST00000537641 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.79□□□□□ -0.04
CPSF7-218ENST00000537641 CACNA1FO60840 1977 aa14.79□□□□□ -0.04
CPSF7-218ENST00000537641 SETD1BQ9UPS6 1966 aaKnown RBP14.79□□□□□ -0.04
CPSF7-218ENST00000537641 PXDNLA1KZ92 1463 aa14.78□□□□□ -0.04
CPSF7-218ENST00000537641 SOX12O15370 315 aa14.78□□□□□ -0.04
CPSF7-218ENST00000537641 KRT24Q2M2I5 525 aa14.78□□□□□ -0.04
CPSF7-218ENST00000537641 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
CPSF7-218ENST00000537641 AOX1Q06278 1338 aa14.77□□□□□ -0.04
CPSF7-218ENST00000537641 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.04
CPSF7-218ENST00000537641 GNAI2P04899 355 aa14.77□□□□□ -0.05
CPSF7-218ENST00000537641 ANKLE2Q86XL3 938 aa14.77□□□□□ -0.05
CPSF7-218ENST00000537641 SYCE3A1L190 88 aa14.76□□□□□ -0.05
CPSF7-218ENST00000537641 APBB1O00213 710 aa14.76□□□□□ -0.05
CPSF7-218ENST00000537641 PHF14O94880 888 aa14.76□□□□□ -0.05
CPSF7-218ENST00000537641 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
CPSF7-218ENST00000537641 AMPHP49418 695 aa14.76□□□□□ -0.05
CPSF7-218ENST00000537641 NEK4P51957 841 aa14.76□□□□□ -0.05
CPSF7-218ENST00000537641 SRCIN1Q9C0H9 1055 aa14.76□□□□□ -0.05
CPSF7-218ENST00000537641 LTN1O94822 1766 aa14.76□□□□□ -0.05
CPSF7-218ENST00000537641 NLRP6P59044 892 aa14.75□□□□□ -0.05
CPSF7-218ENST00000537641 MCM10Q7L590 875 aa14.75□□□□□ -0.05
CPSF7-218ENST00000537641 TSPY26PQ9H489 355 aa14.75□□□□□ -0.05
CPSF7-218ENST00000537641 R3HCC1Q9Y3T6 440 aaKnown RBP14.75□□□□□ -0.05
CPSF7-218ENST00000537641 LRRCC1Q9C099 1032 aa14.75□□□□□ -0.05
CPSF7-218ENST00000537641 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
CPSF7-218ENST00000537641 SOS1Q07889 1333 aaPredicted RBP14.74□□□□□ -0.05
CPSF7-218ENST00000537641 GNAI3P08754 354 aa14.74□□□□□ -0.05
CPSF7-218ENST00000537641 MX1P20591 662 aa14.74□□□□□ -0.05
CPSF7-218ENST00000537641 MTERF4Q7Z6M4 381 aaKnown RBP14.74□□□□□ -0.05
CPSF7-218ENST00000537641 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
CPSF7-218ENST00000537641 PKNOX2Q96KN3 472 aa14.74□□□□□ -0.05
CPSF7-218ENST00000537641 EYA1Q99502 592 aa14.74□□□□□ -0.05
CPSF7-218ENST00000537641 NWD1Q149M9 1564 aa14.74□□□□□ -0.05
CPSF7-218ENST00000537641 CHMLP26374 656 aa14.73□□□□□ -0.05
CPSF7-218ENST00000537641 MTHFSDQ2M296 383 aaKnown RBP14.73□□□□□ -0.05
CPSF7-218ENST00000537641 UVSSAQ2YD98 709 aa14.73□□□□□ -0.05
CPSF7-218ENST00000537641 RTF1Q92541 710 aaKnown RBP14.73□□□□□ -0.05
CPSF7-218ENST00000537641 NSFL1CQ9UNZ2 370 aaKnown RBP14.73□□□□□ -0.05
CPSF7-218ENST00000537641 ADGRL3Q9HAR2 1447 aa14.73□□□□□ -0.05
CPSF7-218ENST00000537641 DYNC1I1O14576 645 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 HTATSF1O43719 755 aaKnown RBP14.72□□□□□ -0.05
CPSF7-218ENST00000537641 SASS6Q6UVJ0 657 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 FAM184AQ8NB25 1140 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
CPSF7-218ENST00000537641 WDR33Q9C0J8 1336 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms