RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 LDHCP07864 332 aa13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 SETQ01105 290 aaPredicted RBP13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 ZCCHC11Q5TAX3 1644 aaKnown RBP13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 TSR1Q2NL82 804 aaKnown RBP13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 NBPF6Q5VWK0 638 aa13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 NBPF4Q96M43 638 aa13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
AMBRA1-211ENST00000533727 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 TPM1P09493 284 aa13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 ANKRD1Q15327 319 aa13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 BTG4Q9NY30 223 aa13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 MTERF4Q7Z6M4 381 aaKnown RBP13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 SETDB2Q96T68 719 aa13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 EFCAB6Q5THR3 1501 aa13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 HECW2Q9P2P5 1572 aa13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 EDC4Q6P2E9 1401 aaKnown RBP13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 RTCBQ9Y3I0 505 aaKnown RBP13.43□□□□□ -0.26
AMBRA1-211ENST00000533727 PDCP20941 246 aa13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 R3HCC1Q9Y3T6 440 aaKnown RBP13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 NFKBIBQ15653 356 aa13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 CCDC152Q4G0S7 254 aa13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 ARAP3Q8WWN8 1544 aa13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 KRT32Q14532 448 aa13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 MIS18AQ9NYP9 233 aa13.42□□□□□ -0.26
AMBRA1-211ENST00000533727 KDM6BO15054 1643 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 TDO2P48775 406 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 NUCB2P80303 420 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 SPTY2D1Q68D10 685 aaPredicted RBP13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 TRIM22Q8IYM9 498 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 RRP12Q5JTH9 1297 aaKnown RBP13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 C6orf229H3BNL8 230 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 MAP3K12Q12852 859 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 DZIP1Q86YF9 867 aaKnown RBP13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
AMBRA1-211ENST00000533727 ATP2B2Q01814 1243 aa13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 FLIIQ13045 1269 aa13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 AIDAQ96BJ3 306 aa13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 ZBTB3Q9H5J0 574 aa13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 PARP3Q9Y6F1 533 aa13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 ADGBQ8N7X0 1667 aa13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 PZPP20742 1482 aa13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 WWC2Q6AWC2 1192 aa13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 COL17A1Q9UMD9 1497 aaPredicted RBP13.4□□□□□ -0.26
AMBRA1-211ENST00000533727 TPM3P06753 285 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 BAG6P46379 1132 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 GPS2Q13227 327 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 ZNF622Q969S3 477 aaKnown RBP eCLIP13.39□□□□□ -0.276e-7■■■■■ 27
AMBRA1-211ENST00000533727 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 TFCP2L1Q9NZI6 479 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 BCAR3O75815 825 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 ACSBG1Q96GR2 724 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 USP21Q9UK80 565 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 PLEKHG3A1L390 1219 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 CDKL5O76039 1030 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 UBAC1Q9BSL1 405 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 UGGT1Q9NYU2 1555 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 ABCF2Q9UG63 623 aa13.39□□□□□ -0.27
AMBRA1-211ENST00000533727 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 HOXC9P31274 260 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 CREBRFQ8IUR6 639 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 VPS37CA5D8V6 355 aaPredicted RBP13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 MYO1BO43795 1136 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 TXLNAP40222 546 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 USP5P45974 858 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 TTF1Q15361 905 aaPredicted RBP13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 CCDC73Q6ZRK6 1079 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 BABAM1Q9NWV8 329 aa13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 POLR3AO14802 1390 aaPredicted RBP13.38□□□□□ -0.27
AMBRA1-211ENST00000533727 BECN2A8MW95 431 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 GPTP24298 496 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 MRE11P49959 708 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 BRPF3Q9ULD4 1205 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 MAP3K5Q99683 1374 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 TEX35Q5T0J7 233 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 CCDC85AQ96PX6 553 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms