RNA–Protein interactions for RNA: ENST00000525009.5

ATG13-204, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-204ENST00000525009 LGR6Q9HBX8 967 aa13.65□□□□□ -0.22
ATG13-204ENST00000525009 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
ATG13-204ENST00000525009 NOB1Q9ULX3 412 aaKnown RBP13.65□□□□□ -0.22
ATG13-204ENST00000525009 SOS1Q07889 1333 aaPredicted RBP13.64□□□□□ -0.23
ATG13-204ENST00000525009 TEFQ10587 303 aa13.64□□□□□ -0.23
ATG13-204ENST00000525009 ATF7IPQ6VMQ6 1270 aa13.64□□□□□ -0.23
ATG13-204ENST00000525009 MPRIPQ6WCQ1 1025 aa13.64□□□□□ -0.23
ATG13-204ENST00000525009 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
ATG13-204ENST00000525009 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
ATG13-204ENST00000525009 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
ATG13-204ENST00000525009 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
ATG13-204ENST00000525009 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
ATG13-204ENST00000525009 GLI3P10071 1580 aa13.63□□□□□ -0.23
ATG13-204ENST00000525009 BRWD3Q6RI45 1802 aa13.63□□□□□ -0.23
ATG13-204ENST00000525009 HSP90AB1P08238 724 aaKnown RBP13.63□□□□□ -0.23
ATG13-204ENST00000525009 FTSJ3Q8IY81 847 aaKnown RBP13.63□□□□□ -0.23
ATG13-204ENST00000525009 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
ATG13-204ENST00000525009 MEGF6O75095 1541 aa13.63□□□□□ -0.23
ATG13-204ENST00000525009 PHKG2P15735 406 aa13.62□□□□□ -0.23
ATG13-204ENST00000525009 BAG6P46379 1132 aa13.62□□□□□ -0.23
ATG13-204ENST00000525009 LARP1Q6PKG0 1096 aaKnown RBP13.62□□□□□ -0.23
ATG13-204ENST00000525009 UNC5CLQ8IV45 518 aa13.62□□□□□ -0.23
ATG13-204ENST00000525009 BTG4Q9NY30 223 aa13.62□□□□□ -0.23
ATG13-204ENST00000525009 COG6Q9Y2V7 657 aa13.62□□□□□ -0.23
ATG13-204ENST00000525009 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
ATG13-204ENST00000525009 COL14A1Q05707 1796 aaKnown RBP13.61□□□□□ -0.23
ATG13-204ENST00000525009 BTBD11A6QL63 1104 aa13.61□□□□□ -0.23
ATG13-204ENST00000525009 TRIM27P14373 513 aa13.61□□□□□ -0.23
ATG13-204ENST00000525009 IL2RBP14784 551 aa13.61□□□□□ -0.23
ATG13-204ENST00000525009 KRT24Q2M2I5 525 aa13.61□□□□□ -0.23
ATG13-204ENST00000525009 SEPT12Q8IYM1 358 aa13.61□□□□□ -0.23
ATG13-204ENST00000525009 CLUAP1Q96AJ1 413 aa13.61□□□□□ -0.23
ATG13-204ENST00000525009 CHMP4AQ9BY43 222 aa13.61□□□□□ -0.23
ATG13-204ENST00000525009 RLBP1P12271 317 aa13.6□□□□□ -0.23
ATG13-204ENST00000525009 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
ATG13-204ENST00000525009 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
ATG13-204ENST00000525009 DCAF5Q96JK2 942 aa13.6□□□□□ -0.23
ATG13-204ENST00000525009 TNNQ9UQP3 1299 aa13.6□□□□□ -0.23
ATG13-204ENST00000525009 R3HDM1Q15032 1099 aaKnown RBP13.59□□□□□ -0.23
ATG13-204ENST00000525009 CCDC30Q5VVM6 783 aa13.59□□□□□ -0.23
ATG13-204ENST00000525009 API5Q9BZZ5 524 aaKnown RBP13.59□□□□□ -0.23
ATG13-204ENST00000525009 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
ATG13-204ENST00000525009 PCDH11YQ9BZA8 1340 aa13.59□□□□□ -0.23
ATG13-204ENST00000525009 TCERG1O14776 1098 aaKnown RBP13.58□□□□□ -0.24
ATG13-204ENST00000525009 HOXB7P09629 217 aa13.58□□□□□ -0.24
ATG13-204ENST00000525009 EIF4A1P60842 406 aaKnown RBP13.58□□□□□ -0.24
ATG13-204ENST00000525009 IFFO2Q5TF58 517 aa13.58□□□□□ -0.24
ATG13-204ENST00000525009 STK31Q9BXU1 1019 aa13.58□□□□□ -0.24
ATG13-204ENST00000525009 CHMP4BQ9H444 224 aaKnown RBP13.58□□□□□ -0.24
ATG13-204ENST00000525009 DDX19BQ9UMR2 479 aa13.58□□□□□ -0.24
ATG13-204ENST00000525009 SLIT2O94813 1529 aa13.58□□□□□ -0.24
ATG13-204ENST00000525009 ADAMTS7Q9UKP4 1686 aa13.57□□□□□ -0.24
ATG13-204ENST00000525009 PKD1L3Q7Z443 1732 aa13.57□□□□□ -0.24
ATG13-204ENST00000525009 PARP4Q9UKK3 1724 aaKnown RBP13.57□□□□□ -0.24
ATG13-204ENST00000525009 CYP27B1O15528 508 aa13.57□□□□□ -0.24
ATG13-204ENST00000525009 KRT27Q7Z3Y8 459 aa13.57□□□□□ -0.24
ATG13-204ENST00000525009 SLC52A2Q9HAB3 445 aa13.57□□□□□ -0.24
ATG13-204ENST00000525009 PTPRCP08575 1304 aa13.57□□□□□ -0.24
ATG13-204ENST00000525009 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
ATG13-204ENST00000525009 ITPRIPQ8IWB1 547 aa13.56□□□□□ -0.24
ATG13-204ENST00000525009 TMEM57Q8N5G2 664 aa13.56□□□□□ -0.24
ATG13-204ENST00000525009 KDM6AO15550 1401 aaPredicted RBP13.56□□□□□ -0.24
ATG13-204ENST00000525009 EN1Q05925 392 aaPredicted RBP13.55□□□□□ -0.24
ATG13-204ENST00000525009 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
ATG13-204ENST00000525009 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
ATG13-204ENST00000525009 ONECUT3O60422 494 aaPredicted RBP13.54□□□□□ -0.24
ATG13-204ENST00000525009 CABP4P57796 275 aa13.54□□□□□ -0.24
ATG13-204ENST00000525009 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
ATG13-204ENST00000525009 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
ATG13-204ENST00000525009 ABCC4O15439 1325 aa13.54□□□□□ -0.24
ATG13-204ENST00000525009 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
ATG13-204ENST00000525009 ERVV-2B6SEH9 535 aa13.53□□□□□ -0.24
ATG13-204ENST00000525009 KCNQ3O43525 872 aa13.53□□□□□ -0.24
ATG13-204ENST00000525009 VPS72Q15906 364 aa13.53□□□□□ -0.24
ATG13-204ENST00000525009 HDGFL1Q5TGJ6 251 aa13.53□□□□□ -0.24
ATG13-204ENST00000525009 CDCA7Q9BWT1 371 aaPredicted RBP13.53□□□□□ -0.24
ATG13-204ENST00000525009 THRAP3Q9Y2W1 955 aaKnown RBP13.53□□□□□ -0.24
ATG13-204ENST00000525009 ZNF790Q6PG37 636 aa13.52□□□□□ -0.25
ATG13-204ENST00000525009 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
ATG13-204ENST00000525009 CCDC9Q9Y3X0 531 aaKnown RBP13.52□□□□□ -0.25
ATG13-204ENST00000525009 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.25
ATG13-204ENST00000525009 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.25
ATG13-204ENST00000525009 MRC1P22897 1456 aa13.52□□□□□ -0.25
ATG13-204ENST00000525009 SCN11AQ9UI33 1791 aa13.52□□□□□ -0.25
ATG13-204ENST00000525009 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
ATG13-204ENST00000525009 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
ATG13-204ENST00000525009 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
ATG13-204ENST00000525009 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
ATG13-204ENST00000525009 DISP2A7MBM2 1401 aa13.5□□□□□ -0.25
ATG13-204ENST00000525009 A0A0G2JS52 829 aa13.5□□□□□ -0.25
ATG13-204ENST00000525009 EXOC5O00471 708 aa13.5□□□□□ -0.25
ATG13-204ENST00000525009 ZBTB7BO15156 539 aaPredicted RBP13.5□□□□□ -0.25
ATG13-204ENST00000525009 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
ATG13-204ENST00000525009 MYT1Q01538 1121 aa13.5□□□□□ -0.25
ATG13-204ENST00000525009 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
ATG13-204ENST00000525009 RWDD1Q9H446 243 aaPredicted RBP13.5□□□□□ -0.25
ATG13-204ENST00000525009 ZBTB40Q9NUA8 1239 aa13.5□□□□□ -0.25
ATG13-204ENST00000525009 SPATA31A1Q5TZJ5 1347 aa13.49□□□□□ -0.25
ATG13-204ENST00000525009 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
ATG13-204ENST00000525009 FLIIQ13045 1269 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms