RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 IFT57Q9NWB7 429 aa12.25□□□□□ -0.45
SPIDR-224ENST00000524126 KIAA1210Q9ULL0 1709 aa12.25□□□□□ -0.45
SPIDR-224ENST00000524126 TNNT3P45378 269 aaPredicted RBP12.24□□□□□ -0.45
SPIDR-224ENST00000524126 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 CCDC183Q5T5S1 534 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 C16orf71Q8IYS4 520 aaPredicted RBP12.24□□□□□ -0.45
SPIDR-224ENST00000524126 CCDC112Q8NEF3 446 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 RSPH14Q9UHP6 348 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 GIMAP6Q6P9H5 292 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 FBXO38Q6PIJ6 1188 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 ZNF397Q8NF99 534 aaPredicted RBP12.24□□□□□ -0.45
SPIDR-224ENST00000524126 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 A2ML1A8K2U0 1454 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 SPATA31D1Q6ZQQ2 1576 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 CYP2C19P33261 490 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 MORC1Q86VD1 984 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 PLEKHM2Q8IWE5 1019 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 GTF3C6Q969F1 213 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 RNF216Q9NWF9 866 aaPredicted RBP12.24□□□□□ -0.45
SPIDR-224ENST00000524126 FAM53CQ9NYF3 392 aa12.24□□□□□ -0.45
SPIDR-224ENST00000524126 LOC102724159A0A0B4J2E5 919 aa12.23□□□□□ -0.45
SPIDR-224ENST00000524126 PWP2Q15269 919 aaKnown RBP12.23□□□□□ -0.45
SPIDR-224ENST00000524126 DHX37Q8IY37 1157 aaKnown RBP12.23□□□□□ -0.45
SPIDR-224ENST00000524126 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
SPIDR-224ENST00000524126 NOL10Q9BSC4 688 aaKnown RBP12.23□□□□□ -0.45
SPIDR-224ENST00000524126 TSPYL1Q9H0U9 437 aa12.23□□□□□ -0.45
SPIDR-224ENST00000524126 RPGRIP1LQ68CZ1 1315 aa12.23□□□□□ -0.45
SPIDR-224ENST00000524126 NPHP1O15259 732 aa12.23□□□□□ -0.45
SPIDR-224ENST00000524126 GYS2P54840 703 aa12.23□□□□□ -0.45
SPIDR-224ENST00000524126 OTUD7AQ8TE49 926 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-224ENST00000524126 NEK4P51957 841 aa12.22□□□□□ -0.45
SPIDR-224ENST00000524126 ELF2Q15723 593 aa12.22□□□□□ -0.45
SPIDR-224ENST00000524126 NEK11Q8NG66 645 aa12.22□□□□□ -0.45
SPIDR-224ENST00000524126 NRBP1Q9UHY1 535 aa12.22□□□□□ -0.45
SPIDR-224ENST00000524126 ZNF215Q9UL58 517 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-224ENST00000524126 U2AF1L5P0DN76 240 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-224ENST00000524126 U2AF1Q01081 240 aaKnown RBP eCLIP12.22□□□□□ -0.45
SPIDR-224ENST00000524126 CCDC186Q7Z3E2 898 aa12.22□□□□□ -0.45
SPIDR-224ENST00000524126 ZNF446Q9NWS9 450 aa12.22□□□□□ -0.45
SPIDR-224ENST00000524126 CNPY2Q9Y2B0 182 aa12.22□□□□□ -0.45
SPIDR-224ENST00000524126 MX1P20591 662 aa12.21□□□□□ -0.45
SPIDR-224ENST00000524126 MTHFSP49914 203 aa12.21□□□□□ -0.45
SPIDR-224ENST00000524126 TTC22Q5TAA0 569 aa12.21□□□□□ -0.45
SPIDR-224ENST00000524126 TCHHQ07283 1943 aa12.21□□□□□ -0.46
SPIDR-224ENST00000524126 ZBTB7BO15156 539 aaPredicted RBP12.21□□□□□ -0.46
SPIDR-224ENST00000524126 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.46
SPIDR-224ENST00000524126 WAPLQ7Z5K2 1190 aa12.21□□□□□ -0.46
SPIDR-224ENST00000524126 SLC12A5Q9H2X9 1139 aa12.21□□□□□ -0.46
SPIDR-224ENST00000524126 CABP2Q9NPB3 220 aa12.21□□□□□ -0.46
SPIDR-224ENST00000524126 QRICH2Q9H0J4 1663 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 MINK1Q8N4C8 1332 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-224ENST00000524126 RIMS2Q9UQ26 1411 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 TRIM66O15016 1216 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-224ENST00000524126 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-224ENST00000524126 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 NOP2P46087 812 aaKnown RBP12.2□□□□□ -0.46
SPIDR-224ENST00000524126 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-224ENST00000524126 PTPRMP28827 1452 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 TNRQ92752 1358 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 GOLGA6L6A8MZA4 724 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 TPM3P06753 285 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 TPD52L1Q16890 204 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-224ENST00000524126 FUCA2Q9BTY2 467 aa12.2□□□□□ -0.46
SPIDR-224ENST00000524126 ARHGEF28Q8N1W1 1705 aaKnown RBP12.19□□□□□ -0.46
SPIDR-224ENST00000524126 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
SPIDR-224ENST00000524126 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 EFCC1Q9HA90 598 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 PPP6R1Q9UPN7 881 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
SPIDR-224ENST00000524126 ATAD2Q6PL18 1390 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 DHX16O60231 1041 aaKnown RBP12.19□□□□□ -0.46
SPIDR-224ENST00000524126 SDSP20132 328 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 PSEN1P49768 467 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 SYT10Q6XYQ8 523 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 C10orf67Q8IYJ2 551 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
SPIDR-224ENST00000524126 ERBB3P21860 1342 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 LTKP29376 864 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 ALKQ9UM73 1620 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 APBB1O00213 710 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 CEP135Q66GS9 1140 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 DRC7Q8IY82 874 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 RASSF4Q9H2L5 321 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 YY1AP1Q9H869 796 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 GEMIN8Q9NWZ8 242 aaKnown RBP12.18□□□□□ -0.46
SPIDR-224ENST00000524126 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 PAXBP1Q9Y5B6 917 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 C3P01024 1663 aa12.18□□□□□ -0.46
SPIDR-224ENST00000524126 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
SPIDR-224ENST00000524126 METP08581 1390 aa12.17□□□□□ -0.46
SPIDR-224ENST00000524126 NSD3Q9BZ95 1437 aa12.17□□□□□ -0.46
SPIDR-224ENST00000524126 USP27XA6NNY8 438 aa12.17□□□□□ -0.46
SPIDR-224ENST00000524126 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-224ENST00000524126 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
SPIDR-224ENST00000524126 POLKQ9UBT6 870 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms