RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 FOXD4L1Q9NU39 408 aa8.19□□□□□ -1.1
CDH12-203ENST00000517378 PHRF1Q9P1Y6 1649 aaKnown RBP8.19□□□□□ -1.1
CDH12-203ENST00000517378 LTKP29376 864 aa8.19□□□□□ -1.1
CDH12-203ENST00000517378 TSPYL4Q9UJ04 414 aa8.19□□□□□ -1.1
CDH12-203ENST00000517378 AOX1Q06278 1338 aa8.19□□□□□ -1.1
CDH12-203ENST00000517378 KDM3BQ7LBC6 1761 aa8.19□□□□□ -1.1
CDH12-203ENST00000517378 ESPNB1AK53 854 aa8.18□□□□□ -1.1
CDH12-203ENST00000517378 EPB41L2O43491 1005 aaKnown RBP8.18□□□□□ -1.1
CDH12-203ENST00000517378 GNAI2P04899 355 aa8.18□□□□□ -1.1
CDH12-203ENST00000517378 CCDC173Q0VFZ6 552 aa8.18□□□□□ -1.1
CDH12-203ENST00000517378 G2E3Q7L622 706 aa8.18□□□□□ -1.1
CDH12-203ENST00000517378 RTF1Q92541 710 aaKnown RBP8.18□□□□□ -1.1
CDH12-203ENST00000517378 LMBRD1Q9NUN5 540 aa8.18□□□□□ -1.1
CDH12-203ENST00000517378 STAP2Q9UGK3 403 aa8.18□□□□□ -1.1
CDH12-203ENST00000517378 ERBB4Q15303 1308 aa8.18□□□□□ -1.1
CDH12-203ENST00000517378 FOXO3O43524 673 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 MCM2P49736 904 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 EYA1Q99502 592 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 TBX22Q9Y458 520 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 LTN1O94822 1766 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 MAP3K5Q99683 1374 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 GNAI3P08754 354 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 ANAPC15P60006 121 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 ZDHHC9Q9Y397 364 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 DDX49Q9Y6V7 483 aaKnown RBP8.17□□□□□ -1.1
CDH12-203ENST00000517378 LMO7Q8WWI1 1683 aa8.17□□□□□ -1.1
CDH12-203ENST00000517378 NASPP49321 788 aaPredicted RBP8.16□□□□□ -1.1
CDH12-203ENST00000517378 ATP8B2P98198 1209 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 FLIIQ13045 1269 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 CCDC30Q5VVM6 783 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 ESYT1Q9BSJ8 1104 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 STK31Q9BXU1 1019 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 SRCIN1Q9C0H9 1055 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 F6X3S4 739 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 CUL4AQ13619 759 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 PKP1Q13835 747 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 LRRCC1Q9C099 1032 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 FER1L4A9Z1Z3 1794 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 MX1P20591 662 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 MCTP1Q6DN14 999 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 ZGPATQ8N5A5 531 aaKnown RBP8.16□□□□□ -1.1
CDH12-203ENST00000517378 MIS18AQ9NYP9 233 aa8.16□□□□□ -1.1
CDH12-203ENST00000517378 GNAT3A8MTJ3 354 aa8.15□□□□□ -1.1
CDH12-203ENST00000517378 ZSCAN23Q3MJ62 389 aa8.15□□□□□ -1.1
CDH12-203ENST00000517378 TRIM44Q96DX7 344 aaPredicted RBP8.15□□□□□ -1.1
CDH12-203ENST00000517378 INTS4Q96HW7 963 aaKnown RBP8.15□□□□□ -1.1
CDH12-203ENST00000517378 CEMIPQ8WUJ3 1361 aa8.15□□□□□ -1.11
CDH12-203ENST00000517378 NFAT5O94916 1531 aa8.15□□□□□ -1.11
CDH12-203ENST00000517378 HOXC9P31274 260 aa8.15□□□□□ -1.11
CDH12-203ENST00000517378 HS1BP3Q53T59 392 aa8.15□□□□□ -1.11
CDH12-203ENST00000517378 SLC4A10Q6U841 1118 aa8.15□□□□□ -1.11
CDH12-203ENST00000517378 AMOTL2Q9Y2J4 779 aa8.15□□□□□ -1.11
CDH12-203ENST00000517378 EID1Q9Y6B2 187 aa8.15□□□□□ -1.11
CDH12-203ENST00000517378 PNMA6EA0A0J9YXQ4 647 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 APBB1O00213 710 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 CHMLP26374 656 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 EXOC6BQ9Y2D4 811 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 MCCP23508 829 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 AMPHP49418 695 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 GPT2Q8TD30 523 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 TMX3Q96JJ7 454 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 PDLIM2Q96JY6 352 aa8.14□□□□□ -1.11
CDH12-203ENST00000517378 BRD1O95696 1058 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 POLA2Q14181 598 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 CAVIN1Q6NZI2 390 aaKnown RBP8.13□□□□□ -1.11
CDH12-203ENST00000517378 SSH3Q8TE77 659 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 CAMTA1Q9Y6Y1 1673 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 LMTK3Q96Q04 1460 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 NUTM2FA1L443 756 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 HOXB7P09629 217 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 FKBP5Q13451 457 aaPredicted RBP8.13□□□□□ -1.11
CDH12-203ENST00000517378 IL17REQ8NFR9 667 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 SLC26A8Q96RN1 970 aa8.13□□□□□ -1.11
CDH12-203ENST00000517378 ADGRL3Q9HAR2 1447 aa8.12□□□□□ -1.11
CDH12-203ENST00000517378 RAB11FIP3O75154 756 aa8.12□□□□□ -1.11
CDH12-203ENST00000517378 TAF7Q15545 349 aaPredicted RBP8.12□□□□□ -1.11
CDH12-203ENST00000517378 ZSCAN30Q86W11 494 aa8.12□□□□□ -1.11
CDH12-203ENST00000517378 ANP32BQ92688 251 aaKnown RBP8.12□□□□□ -1.11
CDH12-203ENST00000517378 USP44Q9H0E7 712 aa8.12□□□□□ -1.11
CDH12-203ENST00000517378 OVOS2A0A0G2JMS6 1433 aa8.12□□□□□ -1.11
CDH12-203ENST00000517378 NCAPD2Q15021 1401 aa8.12□□□□□ -1.11
CDH12-203ENST00000517378 MBD3O95983 291 aa8.12□□□□□ -1.11
CDH12-203ENST00000517378 NEK4P51957 841 aa8.12□□□□□ -1.11
CDH12-203ENST00000517378 NGDNQ8NEJ9 315 aaKnown RBP8.12□□□□□ -1.11
CDH12-203ENST00000517378 USP42Q9H9J4 1324 aaKnown RBP8.12□□□□□ -1.11
CDH12-203ENST00000517378 CHD2O14647 1828 aaKnown RBP8.12□□□□□ -1.11
CDH12-203ENST00000517378 PLEKHG5O94827 1062 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 HSPA4P34932 840 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 PALD1Q9ULE6 856 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 LRRFIP2Q9Y608 721 aaKnown RBP8.11□□□□□ -1.11
CDH12-203ENST00000517378 ADAMTS7Q9UKP4 1686 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 SIPA1L3O60292 1781 aaPredicted RBP8.11□□□□□ -1.11
CDH12-203ENST00000517378 SOX12O15370 315 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 PRPF40AO75400 957 aaKnown RBP8.11□□□□□ -1.11
CDH12-203ENST00000517378 UBTFL1P0CB47 393 aaPredicted RBP8.11□□□□□ -1.11
CDH12-203ENST00000517378 LRSAM1Q6UWE0 723 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 RBSNQ9H1K0 784 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 PRIM1P49642 420 aaKnown RBP8.11□□□□□ -1.11
CDH12-203ENST00000517378 NLRP6P59044 892 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 TSHZ3Q63HK5 1081 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms