RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 HMOX1P09601 288 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 IFIT2P09913 472 aaKnown RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 UBTFL1P0CB47 393 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 RLBP1P12271 317 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 MX1P20591 662 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 NEXNQ0ZGT2 675 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 G3BP1Q13283 466 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 FKBP5Q13451 457 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 KRT32Q14532 448 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 TAF7Q15545 349 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 NUTM2DQ5VT03 806 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 NGDNQ8NEJ9 315 aaKnown RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 NUDT16Q96DE0 195 aaKnown RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 SCAND2PQ9GZW5 306 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 OSBPL3Q9H4L5 887 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 ANO2Q9NQ90 1003 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 SH2B1Q9NRF2 756 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 FAM13BQ9NYF5 915 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 C9orf78Q9NZ63 289 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 POLKQ9UBT6 870 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 TSPYL4Q9UJ04 414 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 LIMCH1Q9UPQ0 1083 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 R3HCC1Q9Y3T6 440 aaKnown RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 PAXBP1Q9Y5B6 917 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 CYP46A1Q9Y6A2 500 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 STK24Q9Y6E0 443 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 REREQ9P2R6 1566 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 ANKRD26Q9UPS8 1709 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 ABCC1P33527 1531 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 KIF20BQ96Q89 1820 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 MLH3Q9UHC1 1453 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 USP19O94966 1318 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 AOX1Q06278 1338 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 IFT172Q9UG01 1749 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 BECN2A8MW95 431 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 H3BQV1 296 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 KIF2AO00139 706 aaPredicted RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 CHL1O00533 1208 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 DHX16O60231 1041 aaKnown RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 GLRX3O76003 335 aaKnown RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 TPM1P09493 284 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 SDSP20132 328 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 UBE2HP62256 183 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 TUBB4BP68371 445 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 KRT85P78386 507 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZSCAN23Q3MJ62 389 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 PLEKHO1Q53GL0 409 aaPredicted RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 C1orf141Q5JVX7 400 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 CCDC183Q5T5S1 534 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 IFFO2Q5TF58 517 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 LARP1BQ659C4 914 aaKnown RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 ATL3Q6DD88 541 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 SULT6B1Q6IMI4 303 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 SKAP1Q86WV1 359 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 TICAM2Q86XR7 235 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZNF579Q8NAF0 562 aaKnown RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 EVI5LQ96CN4 794 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 KIF1BPQ96EK5 621 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZNF396Q96N95 335 aaPredicted RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 BCL11BQ9C0K0 894 aaPredicted RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZSCAN16Q9H4T2 348 aaPredicted RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 MBIPQ9NS73 344 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 LMBRD1Q9NUN5 540 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 USP25Q9UHP3 1055 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 HOOK1Q9UJC3 728 aaKnown RBP2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 CLEC11AQ9Y240 323 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZKSCAN5Q9Y2L8 839 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 LMTK2Q8IWU2 1503 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 AATKQ6ZMQ8 1374 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 DLG5Q8TDM6 1919 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 ABCA9Q8IUA7 1624 aa2.46□□□□□ -2.02
RNU1-40P-201ENST00000516816 TTC41PQ6P2S7 1318 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 TTC21AQ8NDW8 1320 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ARHGAP31Q2M1Z3 1444 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 PPIP5K1Q6PFW1 1433 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 SSH2Q76I76 1423 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ASXL2Q76L83 1435 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 MYOM1P52179 1685 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZC3H13Q5T200 1668 aaKnown RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 SYCE3A1L190 88 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 SMTNL1A8MU46 457 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 STX6O43752 255 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 GTPBP6O43824 516 aaPredicted RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 KDM4AO75164 1064 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 HOXB7P09629 217 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZNF853P0CG23 659 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZSCAN22P10073 491 aaPredicted RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 SSFA2P28290 1259 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 IL13P35225 146 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 PRIM1P49642 420 aaKnown RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 NUBP1P53384 320 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 PDE1AP54750 535 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 FAM193AP78312 1265 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 TEFQ10587 303 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 GPS2Q13227 327 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 NOLC1Q14978 699 aaKnown RBP eCLIP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 SF3A1Q15459 793 aaKnown RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 E2F4Q16254 413 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 AMOTQ4VCS5 1084 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 TEX35Q5T0J7 233 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms