RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 TAF1LQ8IZX4 1826 aa26.73■■□□□ 1.87
HOXC6-204ENST00000509328 SIPA1L3O60292 1781 aaPredicted RBP26.73■■□□□ 1.87
HOXC6-204ENST00000509328 IL17REQ8NFR9 667 aa26.72■■□□□ 1.87
HOXC6-204ENST00000509328 C5P01031 1676 aa26.71■■□□□ 1.87
HOXC6-204ENST00000509328 HTATSF1O43719 755 aaKnown RBP26.71■■□□□ 1.87
HOXC6-204ENST00000509328 RTF1Q92541 710 aaKnown RBP26.71■■□□□ 1.87
HOXC6-204ENST00000509328 NFE2L2Q16236 605 aa26.7■■□□□ 1.86
HOXC6-204ENST00000509328 MRS2Q9HD23 443 aa26.7■■□□□ 1.86
HOXC6-204ENST00000509328 CEMIPQ8WUJ3 1361 aa26.7■■□□□ 1.86
HOXC6-204ENST00000509328 ZNF831Q5JPB2 1677 aa26.7■■□□□ 1.86
HOXC6-204ENST00000509328 HMGB2P26583 209 aaKnown RBP26.68■■□□□ 1.86
HOXC6-204ENST00000509328 KCNQ4P56696 695 aa26.68■■□□□ 1.86
HOXC6-204ENST00000509328 TEFQ10587 303 aa26.68■■□□□ 1.86
HOXC6-204ENST00000509328 R3HDM1Q15032 1099 aaKnown RBP26.68■■□□□ 1.86
HOXC6-204ENST00000509328 RUNDC1Q96C34 613 aa26.68■■□□□ 1.86
HOXC6-204ENST00000509328 ANO8Q9HCE9 1232 aaPredicted RBP26.68■■□□□ 1.86
HOXC6-204ENST00000509328 STK32BQ9NY57 414 aa26.68■■□□□ 1.86
HOXC6-204ENST00000509328 LOC102724428A0A0B4J2F2 783 aa26.67■■□□□ 1.86
HOXC6-204ENST00000509328 PSDA5PKW4 1024 aaPredicted RBP26.67■■□□□ 1.86
HOXC6-204ENST00000509328 SIK1P57059 783 aa26.67■■□□□ 1.86
HOXC6-204ENST00000509328 CCDC146Q8IYE0 955 aa26.67■■□□□ 1.86
HOXC6-204ENST00000509328 SLC15A2Q16348 729 aa26.65■■□□□ 1.86
HOXC6-204ENST00000509328 MCM10Q7L590 875 aa26.65■■□□□ 1.86
HOXC6-204ENST00000509328 QSER1Q2KHR3 1735 aa26.64■■□□□ 1.85
HOXC6-204ENST00000509328 UBR2Q8IWV8 1755 aa26.63■■□□□ 1.85
HOXC6-204ENST00000509328 PNISRQ8TF01 805 aaKnown RBP26.63■■□□□ 1.85
HOXC6-204ENST00000509328 RBM42Q9BTD8 480 aaKnown RBP26.63■■□□□ 1.85
HOXC6-204ENST00000509328 ATP6V1AP38606 617 aa26.62■■□□□ 1.85
HOXC6-204ENST00000509328 TMPOP42166 694 aaKnown RBP26.62■■□□□ 1.85
HOXC6-204ENST00000509328 DCTN1Q14203 1278 aa26.62■■□□□ 1.85
HOXC6-204ENST00000509328 AKT1S1Q96B36 256 aa26.62■■□□□ 1.85
HOXC6-204ENST00000509328 TUBGCP6Q96RT7 1819 aa26.62■■□□□ 1.85
HOXC6-204ENST00000509328 C4BP0C0L5 1744 aa26.62■■□□□ 1.85
HOXC6-204ENST00000509328 RIPK4P57078 832 aa26.61■■□□□ 1.85
HOXC6-204ENST00000509328 ZNF827Q17R98 1081 aa26.61■■□□□ 1.85
HOXC6-204ENST00000509328 CICQ96RK0 1608 aaPredicted RBP26.61■■□□□ 1.85
HOXC6-204ENST00000509328 COL5A3P25940 1745 aaPredicted RBP26.6■■□□□ 1.85
HOXC6-204ENST00000509328 SLC39A6Q13433 755 aa26.6■■□□□ 1.85
HOXC6-204ENST00000509328 PTCD1O75127 700 aaKnown RBP26.59■■□□□ 1.85
HOXC6-204ENST00000509328 CASZ1Q86V15 1759 aa26.58■■□□□ 1.85
HOXC6-204ENST00000509328 LMOD3Q0VAK6 560 aa26.58■■□□□ 1.85
HOXC6-204ENST00000509328 ITPK1Q13572 414 aa26.58■■□□□ 1.85
HOXC6-204ENST00000509328 SLC4A9Q96Q91 983 aa26.58■■□□□ 1.85
HOXC6-204ENST00000509328 TJP1Q07157 1748 aa26.58■■□□□ 1.85
HOXC6-204ENST00000509328 KCPQ6ZWJ8 1503 aa26.58■■□□□ 1.85
HOXC6-204ENST00000509328 TTC5Q8N0Z6 440 aa26.57■■□□□ 1.84
HOXC6-204ENST00000509328 RRP7AQ9Y3A4 280 aaKnown RBP26.57■■□□□ 1.84
HOXC6-204ENST00000509328 BTBD11A6QL63 1104 aa26.56■■□□□ 1.84
HOXC6-204ENST00000509328 DIEXFQ68CQ4 756 aaKnown RBP26.56■■□□□ 1.84
HOXC6-204ENST00000509328 LINC00116Q8NCU8 138 aa26.56■■□□□ 1.84
HOXC6-204ENST00000509328 UBR3Q6ZT12 1888 aa26.55■■□□□ 1.84
HOXC6-204ENST00000509328 NEUROD2Q15784 382 aa26.55■■□□□ 1.84
HOXC6-204ENST00000509328 ZNF790Q6PG37 636 aa26.55■■□□□ 1.84
HOXC6-204ENST00000509328 TFCP2L1Q9NZI6 479 aa26.55■■□□□ 1.84
HOXC6-204ENST00000509328 TAF7Q15545 349 aaPredicted RBP26.54■■□□□ 1.84
HOXC6-204ENST00000509328 THUMPD2Q9BTF0 503 aaKnown RBP26.53■■□□□ 1.84
HOXC6-204ENST00000509328 KDM3BQ7LBC6 1761 aa26.53■■□□□ 1.84
HOXC6-204ENST00000509328 APAF1O14727 1248 aa26.52■■□□□ 1.84
HOXC6-204ENST00000509328 VSIG10Q8N0Z9 540 aa26.52■■□□□ 1.84
HOXC6-204ENST00000509328 AK7Q96M32 723 aa26.52■■□□□ 1.84
HOXC6-204ENST00000509328 MYH14Q7Z406 1995 aaKnown RBP26.51■■□□□ 1.83
HOXC6-204ENST00000509328 PNPLA7Q6ZV29 1317 aa26.5■■□□□ 1.83
HOXC6-204ENST00000509328 TRIM35Q9UPQ4 493 aa26.5■■□□□ 1.83
HOXC6-204ENST00000509328 ZNF496Q96IT1 587 aaPredicted RBP26.49■■□□□ 1.83
HOXC6-204ENST00000509328 FMNL2Q96PY5 1086 aa26.49■■□□□ 1.83
HOXC6-204ENST00000509328 PDGFDQ9GZP0 370 aaPredicted RBP26.49■■□□□ 1.83
HOXC6-204ENST00000509328 HEG1Q9ULI3 1381 aa26.48■■□□□ 1.83
HOXC6-204ENST00000509328 CNTNAP4Q9C0A0 1308 aa26.48■■□□□ 1.83
HOXC6-204ENST00000509328 CCER2I3L3R5 266 aa26.48■■□□□ 1.83
HOXC6-204ENST00000509328 KCNQ3O43525 872 aa26.48■■□□□ 1.83
HOXC6-204ENST00000509328 RC3H1Q5TC82 1133 aaKnown RBP26.48■■□□□ 1.83
HOXC6-204ENST00000509328 FAM9BQ8IZU0 186 aa26.48■■□□□ 1.83
HOXC6-204ENST00000509328 DNAJC10Q8IXB1 793 aa26.47■■□□□ 1.83
HOXC6-204ENST00000509328 FLAD1Q8NFF5 587 aa26.47■■□□□ 1.83
HOXC6-204ENST00000509328 LRP5O75197 1615 aa26.47■■□□□ 1.83
HOXC6-204ENST00000509328 MIS18AQ9NYP9 233 aa26.46■■□□□ 1.83
HOXC6-204ENST00000509328 GNPATO15228 680 aa26.45■■□□□ 1.82
HOXC6-204ENST00000509328 CRKLP46109 303 aaKnown RBP26.44■■□□□ 1.82
HOXC6-204ENST00000509328 TEX13AQ9BXU3 409 aaPredicted RBP26.44■■□□□ 1.82
HOXC6-204ENST00000509328 BABAM1Q9NWV8 329 aa26.44■■□□□ 1.82
HOXC6-204ENST00000509328 CYP19A1P11511 503 aaPredicted RBP26.43■■□□□ 1.82
HOXC6-204ENST00000509328 SSFA2P28290 1259 aa26.43■■□□□ 1.82
HOXC6-204ENST00000509328 COL23A1Q86Y22 540 aaPredicted RBP26.43■■□□□ 1.82
HOXC6-204ENST00000509328 SLC16A10Q8TF71 515 aa26.42■■□□□ 1.82
HOXC6-204ENST00000509328 RTCBQ9Y3I0 505 aaKnown RBP26.42■■□□□ 1.82
HOXC6-204ENST00000509328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.41■■□□□ 1.82
HOXC6-204ENST00000509328 ZBTB7AO95365 584 aa26.41■■□□□ 1.82
HOXC6-204ENST00000509328 AMIGO3Q86WK7 504 aa26.41■■□□□ 1.82
HOXC6-204ENST00000509328 SPON1Q9HCB6 807 aa26.41■■□□□ 1.82
HOXC6-204ENST00000509328 TSPYL4Q9UJ04 414 aa26.41■■□□□ 1.82
HOXC6-204ENST00000509328 MSH5O43196 834 aa26.4■■□□□ 1.82
HOXC6-204ENST00000509328 RPS6KA4O75676 772 aa26.4■■□□□ 1.82
HOXC6-204ENST00000509328 PHF14O94880 888 aa26.4■■□□□ 1.82
HOXC6-204ENST00000509328 STARD3NLO95772 234 aa26.4■■□□□ 1.82
HOXC6-204ENST00000509328 INTS5Q6P9B9 1019 aaKnown RBP26.4■■□□□ 1.82
HOXC6-204ENST00000509328 MTFR1LQ9H019 292 aa26.4■■□□□ 1.82
HOXC6-204ENST00000509328 CCDC87Q9NVE4 849 aa26.4■■□□□ 1.82
HOXC6-204ENST00000509328 COL24A1Q17RW2 1714 aa26.39■■□□□ 1.82
HOXC6-204ENST00000509328 LAMB4A4D0S4 1761 aa26.39■■□□□ 1.82
HOXC6-204ENST00000509328 SNRPA1P09661 255 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms