RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 CWC22Q9HCG8 908 aaKnown RBP4.8□□□□□ -1.64
ALYREF-201ENST00000504015 NCAPD2Q15021 1401 aa4.8□□□□□ -1.64
ALYREF-201ENST00000504015 LMO7Q8WWI1 1683 aa4.8□□□□□ -1.64
ALYREF-201ENST00000504015 IBTKQ9P2D0 1353 aaPredicted RBP4.79□□□□□ -1.64
ALYREF-201ENST00000504015 LTN1O94822 1766 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 FSD2A1L4K1 749 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 ERC2O15083 957 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 ST18O60284 1047 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 TRAK2O60296 914 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 RAB11FIP3O75154 756 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 GSPT1P15170 499 aaKnown RBP4.79□□□□□ -1.64
ALYREF-201ENST00000504015 SDSP20132 328 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 CEBPAP49715 358 aaPredicted RBP4.79□□□□□ -1.64
ALYREF-201ENST00000504015 NUCB2P80303 420 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 ATP8B2P98198 1209 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 RAB3GAP1Q15042 981 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 ABTB2Q8N961 1025 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 IL17RAQ96F46 866 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 USP26Q9BXU7 913 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 C1orf115Q9H7X2 142 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 STAP2Q9UGK3 403 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 PHF8Q9UPP1 1060 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 MST1RQ04912 1400 aa4.79□□□□□ -1.64
ALYREF-201ENST00000504015 CEMIPQ8WUJ3 1361 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 NFAT5O94916 1531 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 NUTM2FA1L443 756 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 GOLGA6L3A6NEY3 463 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 KCNA6P17658 529 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 MCCP23508 829 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 MRE11P49959 708 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 ANAPC15P60006 121 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 FLIIQ13045 1269 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 AMOTQ4VCS5 1084 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 PLEKHO1Q53GL0 409 aaPredicted RBP4.78□□□□□ -1.64
ALYREF-201ENST00000504015 HSP90AB4PQ58FF6 505 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 FAM43AQ8N2R8 423 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 MEIS3Q99687 375 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 LRRCC1Q9C099 1032 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 KDM3BQ7LBC6 1761 aa4.78□□□□□ -1.64
ALYREF-201ENST00000504015 SLIT3O75094 1523 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 SALL3Q9BXA9 1300 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 KIF1AQ12756 1690 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 CAMTA1Q9Y6Y1 1673 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 TUBGCP6Q96RT7 1819 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 FOXO3O43524 673 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 PDE1AP54750 535 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 PSME1Q06323 249 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 FKBP5Q13451 457 aaPredicted RBP4.77□□□□□ -1.65
ALYREF-201ENST00000504015 KRT24Q2M2I5 525 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 AKAP4Q5JQC9 854 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 SLC4A10Q6U841 1118 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 G2E3Q7L622 706 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 IL17REQ8NFR9 667 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 SSH3Q8TE77 659 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 TNPO1Q92973 898 aaKnown RBP4.77□□□□□ -1.65
ALYREF-201ENST00000504015 ABCC6O95255 1503 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 ADAMTSL3P82987 1691 aa4.77□□□□□ -1.65
ALYREF-201ENST00000504015 SETD1BQ9UPS6 1966 aaKnown RBP4.76□□□□□ -1.65
ALYREF-201ENST00000504015 UBTFL1P0CB47 393 aaPredicted RBP4.76□□□□□ -1.65
ALYREF-201ENST00000504015 MX1P20591 662 aa4.76□□□□□ -1.65
ALYREF-201ENST00000504015 MTX1Q13505 466 aa4.76□□□□□ -1.65
ALYREF-201ENST00000504015 HDGFL1Q5TGJ6 251 aa4.76□□□□□ -1.65
ALYREF-201ENST00000504015 C16orf71Q8IYS4 520 aaPredicted RBP4.76□□□□□ -1.65
ALYREF-201ENST00000504015 KLHL34Q8N239 644 aa4.76□□□□□ -1.65
ALYREF-201ENST00000504015 INTS4Q96HW7 963 aaKnown RBP4.76□□□□□ -1.65
ALYREF-201ENST00000504015 USP44Q9H0E7 712 aa4.76□□□□□ -1.65
ALYREF-201ENST00000504015 DBF4Q9UBU7 674 aaPredicted RBP4.76□□□□□ -1.65
ALYREF-201ENST00000504015 ADAMTS7Q9UKP4 1686 aa4.76□□□□□ -1.65
ALYREF-201ENST00000504015 USP42Q9H9J4 1324 aaKnown RBP4.75□□□□□ -1.65
ALYREF-201ENST00000504015 NPHP4O75161 1426 aaPredicted RBP4.75□□□□□ -1.65
ALYREF-201ENST00000504015 F6X3S4 739 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 SOX12O15370 315 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 ALDH1L1O75891 902 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 CYP2E1P05181 493 aaPredicted RBP4.75□□□□□ -1.65
ALYREF-201ENST00000504015 PDIA4P13667 645 aaKnown RBP4.75□□□□□ -1.65
ALYREF-201ENST00000504015 EIF4A1P60842 406 aaKnown RBP4.75□□□□□ -1.65
ALYREF-201ENST00000504015 TEFQ10587 303 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 POLA2Q14181 598 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 KLHL40Q2TBA0 621 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 ARHGEF25Q86VW2 580 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 SPRYD3Q8NCJ5 442 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 KIF1BPQ96EK5 621 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 ESYT1Q9BSJ8 1104 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.75□□□□□ -1.65
ALYREF-201ENST00000504015 MIS18AQ9NYP9 233 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 SIPA1L3O60292 1781 aaPredicted RBP4.75□□□□□ -1.65
ALYREF-201ENST00000504015 HEG1Q9ULI3 1381 aa4.75□□□□□ -1.65
ALYREF-201ENST00000504015 TRPM3Q9HCF6 1732 aaPredicted RBP4.75□□□□□ -1.65
ALYREF-201ENST00000504015 TTC41PQ6P2S7 1318 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 BAG4O95429 457 aaKnown RBP4.74□□□□□ -1.65
ALYREF-201ENST00000504015 XRCC6P12956 609 aaKnown RBP eCLIP4.74□□□□□ -1.65
ALYREF-201ENST00000504015 CHMLP26374 656 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 CUL4AQ13619 759 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 ESCO1Q5FWF5 840 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 C1orf141Q5JVX7 400 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 BEND3Q5T5X7 828 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 NBPF6Q5VWK0 638 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 ERC1Q8IUD2 1116 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 DNAAF4Q8WXU2 420 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 GPATCH3Q96I76 525 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms