RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 COG6Q9Y2V7 657 aa10.34□□□□□ -0.75
PDZRN3-212ENST00000498048 LRP6O75581 1613 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 NUP188Q5SRE5 1749 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 AMOTQ4VCS5 1084 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 C1orf141Q5JVX7 400 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 DZIP1LQ8IYY4 767 aaKnown RBP10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 PROM2Q8N271 834 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 NLRP2Q9NX02 1062 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 SSUH2Q9Y2M2 353 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 PXDNLA1KZ92 1463 aa10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 KDM6AO15550 1401 aaPredicted RBP10.33□□□□□ -0.76
PDZRN3-212ENST00000498048 CHL1O00533 1208 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 RLBP1P12271 317 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 TRIM27P14373 513 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 MVPQ14764 893 aaKnown RBP10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 AKAP4Q5JQC9 854 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 ATF7IPQ6VMQ6 1270 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 C8orf58Q8NAV2 365 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 RAPGEF4Q8WZA2 1011 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 CLUAP1Q96AJ1 413 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 AK9Q5TCS8 1911 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 RGS12O14924 1447 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 WDR17Q8IZU2 1322 aa10.32□□□□□ -0.76
PDZRN3-212ENST00000498048 ELL2O00472 640 aaPredicted RBP10.31□□□□□ -0.76
PDZRN3-212ENST00000498048 IPO8O15397 1037 aaKnown RBP10.31□□□□□ -0.76
PDZRN3-212ENST00000498048 VAMP4O75379 141 aa10.31□□□□□ -0.76
PDZRN3-212ENST00000498048 TATP17735 454 aaPredicted RBP10.31□□□□□ -0.76
PDZRN3-212ENST00000498048 ANKRD36CQ5JPF3 1778 aa10.31□□□□□ -0.76
PDZRN3-212ENST00000498048 KDM2BQ8NHM5 1336 aa10.31□□□□□ -0.76
PDZRN3-212ENST00000498048 BRPF1P55201 1214 aaPredicted RBP10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 AAMPQ13685 434 aa10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 KRT24Q2M2I5 525 aa10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 CENPQQ7L2Z9 268 aaPredicted RBP10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 ITPRIPQ8IWB1 547 aa10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 MRPL50Q8N5N7 158 aaKnown RBP10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 RBM42Q9BTD8 480 aaKnown RBP10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 NOB1Q9ULX3 412 aaKnown RBP10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 ABCC4O15439 1325 aa10.3□□□□□ -0.76
PDZRN3-212ENST00000498048 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
PDZRN3-212ENST00000498048 TEFQ10587 303 aa10.29□□□□□ -0.76
PDZRN3-212ENST00000498048 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
PDZRN3-212ENST00000498048 BABAM1Q9NWV8 329 aa10.29□□□□□ -0.76
PDZRN3-212ENST00000498048 DDX19BQ9UMR2 479 aa10.29□□□□□ -0.76
PDZRN3-212ENST00000498048 SOS1Q07889 1333 aaPredicted RBP10.29□□□□□ -0.76
PDZRN3-212ENST00000498048 TUBGCP6Q96RT7 1819 aa10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 TJP1Q07157 1748 aa10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 RNMTO43148 476 aaKnown RBP10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 TMEM57Q8N5G2 664 aa10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 MIS18AQ9NYP9 233 aa10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 SPG7Q9UQ90 795 aa10.28□□□□□ -0.76
PDZRN3-212ENST00000498048 TAF7Q15545 349 aaPredicted RBP10.27□□□□□ -0.77
PDZRN3-212ENST00000498048 TOM1L2Q6ZVM7 507 aa10.27□□□□□ -0.77
PDZRN3-212ENST00000498048 PTPRCP08575 1304 aa10.27□□□□□ -0.77
PDZRN3-212ENST00000498048 PCDH11XQ9BZA7 1347 aa10.27□□□□□ -0.77
PDZRN3-212ENST00000498048 PCDH11YQ9BZA8 1340 aa10.27□□□□□ -0.77
PDZRN3-212ENST00000498048 CICQ96RK0 1608 aaPredicted RBP10.26□□□□□ -0.77
PDZRN3-212ENST00000498048 TNS2Q63HR2 1409 aa10.26□□□□□ -0.77
PDZRN3-212ENST00000498048 MPRIPQ6WCQ1 1025 aa10.26□□□□□ -0.77
PDZRN3-212ENST00000498048 ARHGAP45Q92619 1136 aa10.26□□□□□ -0.77
PDZRN3-212ENST00000498048 STK31Q9BXU1 1019 aa10.26□□□□□ -0.77
PDZRN3-212ENST00000498048 STRN4Q9NRL3 753 aa10.26□□□□□ -0.77
PDZRN3-212ENST00000498048 KCPQ6ZWJ8 1503 aa10.26□□□□□ -0.77
PDZRN3-212ENST00000498048 CASZ1Q86V15 1759 aa10.26□□□□□ -0.77
PDZRN3-212ENST00000498048 DISP2A7MBM2 1401 aa10.25□□□□□ -0.77
PDZRN3-212ENST00000498048 PHKG2P15735 406 aa10.25□□□□□ -0.77
PDZRN3-212ENST00000498048 LGR6Q9HBX8 967 aa10.25□□□□□ -0.77
PDZRN3-212ENST00000498048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.77
PDZRN3-212ENST00000498048 MYH3P11055 1940 aa10.25□□□□□ -0.77
PDZRN3-212ENST00000498048 BTBD11A6QL63 1104 aa10.24□□□□□ -0.77
PDZRN3-212ENST00000498048 CCDC30Q5VVM6 783 aa10.24□□□□□ -0.77
PDZRN3-212ENST00000498048 IFNL2Q8IZJ0 200 aa10.24□□□□□ -0.77
PDZRN3-212ENST00000498048 CARD10Q9BWT7 1032 aa10.24□□□□□ -0.77
PDZRN3-212ENST00000498048 CHMP4BQ9H444 224 aaKnown RBP10.24□□□□□ -0.77
PDZRN3-212ENST00000498048 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
PDZRN3-212ENST00000498048 SBF2Q86WG5 1849 aa10.23□□□□□ -0.77
PDZRN3-212ENST00000498048 TOM1O60784 492 aa10.23□□□□□ -0.77
PDZRN3-212ENST00000498048 HSP90AB1P08238 724 aaKnown RBP10.23□□□□□ -0.77
PDZRN3-212ENST00000498048 HOXB7P09629 217 aa10.23□□□□□ -0.77
PDZRN3-212ENST00000498048 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
PDZRN3-212ENST00000498048 ATP10DQ9P241 1426 aa10.23□□□□□ -0.77
PDZRN3-212ENST00000498048 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 IL2RBP14784 551 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 EVA1CP58658 441 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 EIF4A1P60842 406 aaKnown RBP10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 PIP4K2BP78356 416 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 LARP1Q6PKG0 1096 aaKnown RBP10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 SLC52A2Q9HAB3 445 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 BTG4Q9NY30 223 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 SLIT2O94813 1529 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 NHSQ6T4R5 1651 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 RREB1Q92766 1687 aa10.22□□□□□ -0.77
PDZRN3-212ENST00000498048 CYP27B1O15528 508 aa10.21□□□□□ -0.77
PDZRN3-212ENST00000498048 NECTIN2Q92692 538 aa10.21□□□□□ -0.77
PDZRN3-212ENST00000498048 DCAF5Q96JK2 942 aa10.21□□□□□ -0.77
PDZRN3-212ENST00000498048 PCDHB15Q9Y5E8 787 aa10.21□□□□□ -0.77
PDZRN3-212ENST00000498048 BCORQ6W2J9 1755 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms