RNA–Protein interactions for RNA: ENST00000497784.1

BRAF-205, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-205ENST00000497784 ITGBL1O95965 494 aaPredicted RBP12.51□□□□□ -0.41
BRAF-205ENST00000497784 ZNF692Q9BU19 519 aaPredicted RBP12.51□□□□□ -0.41
BRAF-205ENST00000497784 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
BRAF-205ENST00000497784 PHF14O94880 888 aa12.5□□□□□ -0.41
BRAF-205ENST00000497784 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
BRAF-205ENST00000497784 CGNL1Q0VF96 1302 aa12.5□□□□□ -0.41
BRAF-205ENST00000497784 TIAM2Q8IVF5 1701 aa12.5□□□□□ -0.41
BRAF-205ENST00000497784 ANKRD24Q8TF21 1146 aa12.49□□□□□ -0.41
BRAF-205ENST00000497784 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
BRAF-205ENST00000497784 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
BRAF-205ENST00000497784 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
BRAF-205ENST00000497784 SMG6Q86US8 1419 aaKnown RBP12.47□□□□□ -0.41
BRAF-205ENST00000497784 SOX10P56693 466 aa12.47□□□□□ -0.41
BRAF-205ENST00000497784 CAPNS2Q96L46 248 aa12.47□□□□□ -0.41
BRAF-205ENST00000497784 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
BRAF-205ENST00000497784 AMIGO3Q86WK7 504 aa12.46□□□□□ -0.41
BRAF-205ENST00000497784 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
BRAF-205ENST00000497784 GPR101Q96P66 508 aaPredicted RBP12.46□□□□□ -0.41
BRAF-205ENST00000497784 USP31Q70CQ4 1352 aa12.46□□□□□ -0.41
BRAF-205ENST00000497784 RASSF7Q02833 373 aa12.46□□□□□ -0.41
BRAF-205ENST00000497784 TRAPPC3LQ5T215 181 aa12.45□□□□□ -0.42
BRAF-205ENST00000497784 SLC17A8Q8NDX2 589 aa12.45□□□□□ -0.42
BRAF-205ENST00000497784 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
BRAF-205ENST00000497784 SCN4AP35499 1836 aa12.44□□□□□ -0.42
BRAF-205ENST00000497784 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
BRAF-205ENST00000497784 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
BRAF-205ENST00000497784 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
BRAF-205ENST00000497784 TAF1DQ9H5J8 278 aaPredicted RBP12.43□□□□□ -0.42
BRAF-205ENST00000497784 GNPATO15228 680 aa12.43□□□□□ -0.42
BRAF-205ENST00000497784 ITGAEP38570 1179 aa12.43□□□□□ -0.42
BRAF-205ENST00000497784 SRPK2P78362 688 aaKnown RBP12.43□□□□□ -0.42
BRAF-205ENST00000497784 LTBP3Q9NS15 1303 aa12.42□□□□□ -0.42
BRAF-205ENST00000497784 PNMA8AQ86V59 439 aaPredicted RBP12.42□□□□□ -0.42
BRAF-205ENST00000497784 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
BRAF-205ENST00000497784 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
BRAF-205ENST00000497784 SMIM5Q71RC9 77 aa12.42□□□□□ -0.42
BRAF-205ENST00000497784 RTCBQ9Y3I0 505 aaKnown RBP12.42□□□□□ -0.42
BRAF-205ENST00000497784 INSRP06213 1382 aa12.41□□□□□ -0.42
BRAF-205ENST00000497784 LINC00116Q8NCU8 138 aa12.41□□□□□ -0.42
BRAF-205ENST00000497784 CABP1Q9NZU7 370 aa12.41□□□□□ -0.42
BRAF-205ENST00000497784 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
BRAF-205ENST00000497784 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
BRAF-205ENST00000497784 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
BRAF-205ENST00000497784 GYS1P13807 737 aa12.4□□□□□ -0.42
BRAF-205ENST00000497784 CABP2Q9NPB3 220 aa12.4□□□□□ -0.42
BRAF-205ENST00000497784 DICER1Q9UPY3 1922 aaKnown RBP12.4□□□□□ -0.42
BRAF-205ENST00000497784 ADAMTSL1Q8N6G6 1762 aa12.4□□□□□ -0.42
BRAF-205ENST00000497784 LOC102724428A0A0B4J2F2 783 aa12.39□□□□□ -0.43
BRAF-205ENST00000497784 SIK1P57059 783 aa12.39□□□□□ -0.43
BRAF-205ENST00000497784 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
BRAF-205ENST00000497784 ERFEQ4G0M1 354 aa12.39□□□□□ -0.43
BRAF-205ENST00000497784 CNTROBQ8N137 903 aa12.39□□□□□ -0.43
BRAF-205ENST00000497784 IP6K1Q92551 441 aa12.39□□□□□ -0.43
BRAF-205ENST00000497784 SAGE1Q9NXZ1 904 aa12.39□□□□□ -0.43
BRAF-205ENST00000497784 PDZRN3Q9UPQ7 1066 aa12.39□□□□□ -0.43
BRAF-205ENST00000497784 PKN2Q16513 984 aaKnown RBP12.38□□□□□ -0.43
BRAF-205ENST00000497784 TTLL6Q8N841 843 aa12.38□□□□□ -0.43
BRAF-205ENST00000497784 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
BRAF-205ENST00000497784 MAP2P11137 1827 aaKnown RBP12.38□□□□□ -0.43
BRAF-205ENST00000497784 NFKBIEO00221 500 aa12.38□□□□□ -0.43
BRAF-205ENST00000497784 CD163L1Q9NR16 1453 aa12.38□□□□□ -0.43
BRAF-205ENST00000497784 DDX21Q9NR30 783 aaKnown RBP eCLIP12.37□□□□□ -0.43
BRAF-205ENST00000497784 PCDH11XQ9BZA7 1347 aa12.36□□□□□ -0.43
BRAF-205ENST00000497784 PCDH11YQ9BZA8 1340 aa12.36□□□□□ -0.43
BRAF-205ENST00000497784 SOX12O15370 315 aa12.36□□□□□ -0.43
BRAF-205ENST00000497784 CHRNA5P30532 468 aa12.36□□□□□ -0.43
BRAF-205ENST00000497784 RFC4P35249 363 aa12.36□□□□□ -0.43
BRAF-205ENST00000497784 HACL1Q9UJ83 578 aa12.36□□□□□ -0.43
BRAF-205ENST00000497784 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
BRAF-205ENST00000497784 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
BRAF-205ENST00000497784 RPS6KA4O75676 772 aa12.35□□□□□ -0.43
BRAF-205ENST00000497784 DDNO94850 711 aaPredicted RBP12.35□□□□□ -0.43
BRAF-205ENST00000497784 CYP4F22Q6NT55 531 aa12.35□□□□□ -0.43
BRAF-205ENST00000497784 CTU1Q7Z7A3 348 aaKnown RBP12.35□□□□□ -0.43
BRAF-205ENST00000497784 ARHGEF1Q92888 912 aaKnown RBP12.35□□□□□ -0.43
BRAF-205ENST00000497784 MPHOSPH9Q99550 1183 aa12.35□□□□□ -0.43
BRAF-205ENST00000497784 TSKSQ9UJT2 592 aa12.35□□□□□ -0.43
BRAF-205ENST00000497784 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
BRAF-205ENST00000497784 DLEC1Q9Y238 1755 aa12.35□□□□□ -0.43
BRAF-205ENST00000497784 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
BRAF-205ENST00000497784 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
BRAF-205ENST00000497784 TNRC18O15417 2968 aaPredicted RBP12.34□□□□□ -0.43
BRAF-205ENST00000497784 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
BRAF-205ENST00000497784 LTN1O94822 1766 aa12.34□□□□□ -0.43
BRAF-205ENST00000497784 MEGF6O75095 1541 aa12.33□□□□□ -0.44
BRAF-205ENST00000497784 CCDC88AQ3V6T2 1871 aa12.33□□□□□ -0.44
BRAF-205ENST00000497784 CASP8AP2Q9UKL3 1982 aa12.32□□□□□ -0.44
BRAF-205ENST00000497784 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
BRAF-205ENST00000497784 SOGA3Q5TF21 947 aa12.32□□□□□ -0.44
BRAF-205ENST00000497784 EPHX2P34913 555 aa12.32□□□□□ -0.44
BRAF-205ENST00000497784 ITPK1Q13572 414 aa12.32□□□□□ -0.44
BRAF-205ENST00000497784 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
BRAF-205ENST00000497784 EAPPQ56P03 285 aaPredicted RBP12.31□□□□□ -0.44
BRAF-205ENST00000497784 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
BRAF-205ENST00000497784 AKAP4Q5JQC9 854 aa12.31□□□□□ -0.44
BRAF-205ENST00000497784 RAPGEF4Q8WZA2 1011 aa12.31□□□□□ -0.44
BRAF-205ENST00000497784 PIGBQ92521 554 aa12.31□□□□□ -0.44
BRAF-205ENST00000497784 TM4SF1P30408 202 aa12.3□□□□□ -0.44
BRAF-205ENST00000497784 HPS5Q9UPZ3 1129 aa12.3□□□□□ -0.44
BRAF-205ENST00000497784 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms