RNA–Protein interactions for RNA: ENST00000497784.1

BRAF-205, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-205ENST00000497784 NISCHQ9Y2I1 1504 aa22.61■■□□□ 1.21
BRAF-205ENST00000497784 ABCC9O60706 1549 aa21.83■■□□□ 1.09
BRAF-205ENST00000497784 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
BRAF-205ENST00000497784 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
BRAF-205ENST00000497784 DNAJC5Q9H3Z4 198 aa20.89■□□□□ 0.94
BRAF-205ENST00000497784 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
BRAF-205ENST00000497784 NACADO15069 1562 aa20.11■□□□□ 0.81
BRAF-205ENST00000497784 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
BRAF-205ENST00000497784 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
BRAF-205ENST00000497784 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
BRAF-205ENST00000497784 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
BRAF-205ENST00000497784 UNC13AQ9UPW8 1703 aa19.79■□□□□ 0.76
BRAF-205ENST00000497784 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
BRAF-205ENST00000497784 CUX2O14529 1486 aa19.62■□□□□ 0.73
BRAF-205ENST00000497784 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
BRAF-205ENST00000497784 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
BRAF-205ENST00000497784 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
BRAF-205ENST00000497784 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
BRAF-205ENST00000497784 ERCC6Q03468 1493 aa19.04■□□□□ 0.64
BRAF-205ENST00000497784 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
BRAF-205ENST00000497784 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
BRAF-205ENST00000497784 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.57
BRAF-205ENST00000497784 AEBP2Q6ZN18 517 aaPredicted RBP18.57■□□□□ 0.56
BRAF-205ENST00000497784 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
BRAF-205ENST00000497784 ZCCHC6Q5VYS8 1495 aaKnown RBP18.48■□□□□ 0.55
BRAF-205ENST00000497784 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
BRAF-205ENST00000497784 NESP48681 1621 aa18.36■□□□□ 0.53
BRAF-205ENST00000497784 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
BRAF-205ENST00000497784 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
BRAF-205ENST00000497784 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
BRAF-205ENST00000497784 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
BRAF-205ENST00000497784 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
BRAF-205ENST00000497784 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
BRAF-205ENST00000497784 RIMBP3CA6NJZ7 1639 aa18.21■□□□□ 0.51
BRAF-205ENST00000497784 RIMBP3BA6NNM3 1639 aa18.21■□□□□ 0.51
BRAF-205ENST00000497784 RIMBP3Q9UFD9 1639 aa18.21■□□□□ 0.51
BRAF-205ENST00000497784 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
BRAF-205ENST00000497784 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
BRAF-205ENST00000497784 WDR62O43379 1518 aa18.13■□□□□ 0.49
BRAF-205ENST00000497784 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
BRAF-205ENST00000497784 ARHGEF11O15085 1522 aa18.04■□□□□ 0.48
BRAF-205ENST00000497784 BAZ1BQ9UIG0 1483 aaKnown RBP17.96■□□□□ 0.47
BRAF-205ENST00000497784 ILDR1Q86SU0 546 aaPredicted RBP17.93■□□□□ 0.46
BRAF-205ENST00000497784 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
BRAF-205ENST00000497784 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
BRAF-205ENST00000497784 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
BRAF-205ENST00000497784 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
BRAF-205ENST00000497784 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
BRAF-205ENST00000497784 ARAP1Q96P48 1450 aa17.77■□□□□ 0.43
BRAF-205ENST00000497784 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
BRAF-205ENST00000497784 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
BRAF-205ENST00000497784 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
BRAF-205ENST00000497784 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
BRAF-205ENST00000497784 CFTRP13569 1480 aa17.42■□□□□ 0.38
BRAF-205ENST00000497784 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
BRAF-205ENST00000497784 CHD1O14646 1710 aa17.37■□□□□ 0.37
BRAF-205ENST00000497784 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
BRAF-205ENST00000497784 CLASP1Q7Z460 1538 aa17.29■□□□□ 0.36
BRAF-205ENST00000497784 MROH2BQ7Z745 1585 aa17.29■□□□□ 0.36
BRAF-205ENST00000497784 ERCC6L2Q5T890 1561 aa17.26■□□□□ 0.35
BRAF-205ENST00000497784 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
BRAF-205ENST00000497784 KDM4FA0A1W2PPD8 638 aa17.23■□□□□ 0.35
BRAF-205ENST00000497784 FBXO41Q8TF61 875 aa17.22■□□□□ 0.35
BRAF-205ENST00000497784 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
BRAF-205ENST00000497784 FBLN2P98095 1184 aa17.17■□□□□ 0.34
BRAF-205ENST00000497784 GAPVD1Q14C86 1478 aa17.16■□□□□ 0.34
BRAF-205ENST00000497784 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
BRAF-205ENST00000497784 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
BRAF-205ENST00000497784 AQRO60306 1485 aaKnown RBP eCLIP17.11■□□□□ 0.33
BRAF-205ENST00000497784 WDR97A6NE52 1622 aa17.08■□□□□ 0.33
BRAF-205ENST00000497784 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
BRAF-205ENST00000497784 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
BRAF-205ENST00000497784 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
BRAF-205ENST00000497784 KIF13AQ9H1H9 1805 aa17.02■□□□□ 0.31
BRAF-205ENST00000497784 SOCS7O14512 581 aa17.02■□□□□ 0.31
BRAF-205ENST00000497784 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
BRAF-205ENST00000497784 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
BRAF-205ENST00000497784 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
BRAF-205ENST00000497784 WIZO95785 1651 aa16.96■□□□□ 0.31
BRAF-205ENST00000497784 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.3
BRAF-205ENST00000497784 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
BRAF-205ENST00000497784 KDM6BO15054 1643 aa16.92■□□□□ 0.3
BRAF-205ENST00000497784 ABCC10Q5T3U5 1492 aa16.9■□□□□ 0.3
BRAF-205ENST00000497784 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
BRAF-205ENST00000497784 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
BRAF-205ENST00000497784 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
BRAF-205ENST00000497784 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
BRAF-205ENST00000497784 FAM69CQ0P6D2 419 aa16.82■□□□□ 0.28
BRAF-205ENST00000497784 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
BRAF-205ENST00000497784 SOGA1O94964 1423 aa16.8■□□□□ 0.28
BRAF-205ENST00000497784 MAPKBP1O60336 1514 aa16.79■□□□□ 0.28
BRAF-205ENST00000497784 DIP2BQ9P265 1576 aa16.75■□□□□ 0.27
BRAF-205ENST00000497784 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
BRAF-205ENST00000497784 CEP170Q5SW79 1584 aa16.71■□□□□ 0.27
BRAF-205ENST00000497784 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
BRAF-205ENST00000497784 SHROOM2Q13796 1616 aa16.69■□□□□ 0.26
BRAF-205ENST00000497784 ILDR2Q71H61 639 aa16.68■□□□□ 0.26
BRAF-205ENST00000497784 NUP160Q12769 1436 aa16.63■□□□□ 0.25
BRAF-205ENST00000497784 DISP3Q9P2K9 1392 aa16.63■□□□□ 0.25
BRAF-205ENST00000497784 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms