RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 NALCNQ8IZF0 1738 aa14.23□□□□□ -0.13
CDCA7-208ENST00000496441 SLIT1O75093 1534 aa14.23□□□□□ -0.13
CDCA7-208ENST00000496441 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
CDCA7-208ENST00000496441 ARHGAP23Q9P227 1491 aa14.22□□□□□ -0.13
CDCA7-208ENST00000496441 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
CDCA7-208ENST00000496441 FOXD4L4Q8WXT5 416 aaPredicted RBP14.22□□□□□ -0.13
CDCA7-208ENST00000496441 RGPD1P0DJD0 1748 aa14.22□□□□□ -0.13
CDCA7-208ENST00000496441 TEFQ10587 303 aa14.22□□□□□ -0.13
CDCA7-208ENST00000496441 CASC1Q6TDU7 716 aa14.22□□□□□ -0.13
CDCA7-208ENST00000496441 PDE1AP54750 535 aa14.21□□□□□ -0.13
CDCA7-208ENST00000496441 ZNF530Q6P9A1 599 aaPredicted RBP14.21□□□□□ -0.13
CDCA7-208ENST00000496441 NUTM1Q86Y26 1132 aa14.21□□□□□ -0.13
CDCA7-208ENST00000496441 CHPF2Q9P2E5 772 aa14.21□□□□□ -0.13
CDCA7-208ENST00000496441 UBTFL1P0CB47 393 aaPredicted RBP14.21□□□□□ -0.13
CDCA7-208ENST00000496441 SSFA2P28290 1259 aa14.21□□□□□ -0.13
CDCA7-208ENST00000496441 ZC3H6P61129 1189 aaKnown RBP14.21□□□□□ -0.13
CDCA7-208ENST00000496441 DDX17Q92841 729 aaKnown RBP14.21□□□□□ -0.13
CDCA7-208ENST00000496441 SNX21Q969T3 373 aa14.21□□□□□ -0.13
CDCA7-208ENST00000496441 USP26Q9BXU7 913 aa14.21□□□□□ -0.13
CDCA7-208ENST00000496441 LRRCC1Q9C099 1032 aa14.21□□□□□ -0.14
CDCA7-208ENST00000496441 PANK2Q9BZ23 570 aa14.2□□□□□ -0.14
CDCA7-208ENST00000496441 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
CDCA7-208ENST00000496441 USP44Q9H0E7 712 aa14.2□□□□□ -0.14
CDCA7-208ENST00000496441 PI4KAP2A4QPH2 592 aa14.19□□□□□ -0.14
CDCA7-208ENST00000496441 PI4KAP1Q8N8J0 262 aa14.19□□□□□ -0.14
CDCA7-208ENST00000496441 KIF24Q5T7B8 1368 aa14.19□□□□□ -0.14
CDCA7-208ENST00000496441 BTBD11A6QL63 1104 aa14.19□□□□□ -0.14
CDCA7-208ENST00000496441 SURF6O75683 361 aaKnown RBP14.19□□□□□ -0.14
CDCA7-208ENST00000496441 NBPF7P0C2Y1 421 aaPredicted RBP14.19□□□□□ -0.14
CDCA7-208ENST00000496441 IP6K1Q92551 441 aa14.19□□□□□ -0.14
CDCA7-208ENST00000496441 GNAI3P08754 354 aa14.18□□□□□ -0.14
CDCA7-208ENST00000496441 PKP1Q13835 747 aa14.18□□□□□ -0.14
CDCA7-208ENST00000496441 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
CDCA7-208ENST00000496441 GCP02774 474 aa14.18□□□□□ -0.14
CDCA7-208ENST00000496441 AIMP1Q12904 312 aaKnown RBP14.18□□□□□ -0.14
CDCA7-208ENST00000496441 CHAMP1Q96JM3 812 aa14.18□□□□□ -0.14
CDCA7-208ENST00000496441 MX1P20591 662 aa14.18□□□□□ -0.14
CDCA7-208ENST00000496441 UNC5CLQ8IV45 518 aa14.18□□□□□ -0.14
CDCA7-208ENST00000496441 ANO2Q9NQ90 1003 aa14.18□□□□□ -0.14
CDCA7-208ENST00000496441 PPP1R42Q7Z4L9 355 aa14.17□□□□□ -0.14
CDCA7-208ENST00000496441 SRGAP3O43295 1099 aa14.17□□□□□ -0.14
CDCA7-208ENST00000496441 NCLP19338 710 aaKnown RBP14.17□□□□□ -0.14
CDCA7-208ENST00000496441 ZGPATQ8N5A5 531 aaKnown RBP14.17□□□□□ -0.14
CDCA7-208ENST00000496441 AXIN2Q9Y2T1 843 aa14.17□□□□□ -0.14
CDCA7-208ENST00000496441 HTATSF1O43719 755 aaKnown RBP14.16□□□□□ -0.14
CDCA7-208ENST00000496441 SRCIN1Q9C0H9 1055 aa14.16□□□□□ -0.14
CDCA7-208ENST00000496441 ERC2O15083 957 aa14.16□□□□□ -0.14
CDCA7-208ENST00000496441 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
CDCA7-208ENST00000496441 FOXD4L6Q3SYB3 417 aaPredicted RBP14.16□□□□□ -0.14
CDCA7-208ENST00000496441 TPRNQ4KMQ1 711 aa14.16□□□□□ -0.14
CDCA7-208ENST00000496441 C1orf141Q5JVX7 400 aa14.16□□□□□ -0.14
CDCA7-208ENST00000496441 FOXD4L3Q6VB84 417 aaPredicted RBP14.16□□□□□ -0.14
CDCA7-208ENST00000496441 NEK4P51957 841 aa14.15□□□□□ -0.14
CDCA7-208ENST00000496441 EIF4A1P60842 406 aaKnown RBP14.15□□□□□ -0.14
CDCA7-208ENST00000496441 OS9Q13438 667 aaPredicted RBP14.15□□□□□ -0.14
CDCA7-208ENST00000496441 PROSER2Q86WR7 435 aaPredicted RBP14.15□□□□□ -0.14
CDCA7-208ENST00000496441 GBP4Q96PP9 640 aa14.15□□□□□ -0.14
CDCA7-208ENST00000496441 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
CDCA7-208ENST00000496441 REC8O95072 547 aa14.15□□□□□ -0.14
CDCA7-208ENST00000496441 XRCC6P12956 609 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDCA7-208ENST00000496441 DDIT3P35638 169 aa14.15□□□□□ -0.14
CDCA7-208ENST00000496441 RABEP1Q15276 862 aa14.15□□□□□ -0.14
CDCA7-208ENST00000496441 ANKRD24Q8TF21 1146 aa14.15□□□□□ -0.14
CDCA7-208ENST00000496441 DDX11L8A8MPP1 907 aa14.14□□□□□ -0.15
CDCA7-208ENST00000496441 PIP4K2AP48426 406 aaPredicted RBP14.14□□□□□ -0.15
CDCA7-208ENST00000496441 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
CDCA7-208ENST00000496441 PROSER3Q2NL68 480 aa14.14□□□□□ -0.15
CDCA7-208ENST00000496441 CABLES1Q8TDN4 633 aa14.14□□□□□ -0.15
CDCA7-208ENST00000496441 ANKARQ7Z5J8 1434 aa14.14□□□□□ -0.15
CDCA7-208ENST00000496441 DTNBO60941 627 aa14.14□□□□□ -0.15
CDCA7-208ENST00000496441 SLC39A6Q13433 755 aa14.14□□□□□ -0.15
CDCA7-208ENST00000496441 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
CDCA7-208ENST00000496441 LTN1O94822 1766 aa14.14□□□□□ -0.15
CDCA7-208ENST00000496441 UPF3BQ9BZI7 483 aaKnown RBP14.14□□□□□ -0.15
CDCA7-208ENST00000496441 RGPD2P0DJD1 1756 aa14.13□□□□□ -0.15
CDCA7-208ENST00000496441 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
CDCA7-208ENST00000496441 CWF19L2Q2TBE0 894 aaKnown RBP14.13□□□□□ -0.15
CDCA7-208ENST00000496441 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
CDCA7-208ENST00000496441 PALD1Q9ULE6 856 aa14.13□□□□□ -0.15
CDCA7-208ENST00000496441 ST18O60284 1047 aa14.13□□□□□ -0.15
CDCA7-208ENST00000496441 PLEKHO1Q53GL0 409 aaPredicted RBP14.13□□□□□ -0.15
CDCA7-208ENST00000496441 KCNH5Q8NCM2 988 aa14.13□□□□□ -0.15
CDCA7-208ENST00000496441 LARP6Q9BRS8 491 aaKnown RBP14.13□□□□□ -0.15
CDCA7-208ENST00000496441 NLRP2Q9NX02 1062 aa14.13□□□□□ -0.15
CDCA7-208ENST00000496441 DNAAF4Q8WXU2 420 aa14.12□□□□□ -0.15
CDCA7-208ENST00000496441 IL25Q9H293 177 aa14.12□□□□□ -0.15
CDCA7-208ENST00000496441 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
CDCA7-208ENST00000496441 C9orf78Q9NZ63 289 aaPredicted RBP14.12□□□□□ -0.15
CDCA7-208ENST00000496441 NCOA3Q9Y6Q9 1424 aa14.12□□□□□ -0.15
CDCA7-208ENST00000496441 SOS1Q07889 1333 aaPredicted RBP14.11□□□□□ -0.15
CDCA7-208ENST00000496441 MYL6BP14649 208 aa14.11□□□□□ -0.15
CDCA7-208ENST00000496441 L1TD1Q5T7N2 865 aaKnown RBP14.11□□□□□ -0.15
CDCA7-208ENST00000496441 PA2G4Q9UQ80 394 aaKnown RBP14.11□□□□□ -0.15
CDCA7-208ENST00000496441 JARID2Q92833 1246 aaPredicted RBP14.11□□□□□ -0.15
CDCA7-208ENST00000496441 MAP3K2Q9Y2U5 619 aa14.11□□□□□ -0.15
CDCA7-208ENST00000496441 CHRNA2Q15822 529 aa14.11□□□□□ -0.15
CDCA7-208ENST00000496441 ESYT1Q9BSJ8 1104 aa14.11□□□□□ -0.15
CDCA7-208ENST00000496441 DDX49Q9Y6V7 483 aaKnown RBP14.11□□□□□ -0.15
CDCA7-208ENST00000496441 MARF1Q9Y4F3 1742 aaKnown RBP14.1□□□□□ -0.15
CDCA7-208ENST00000496441 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms