RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 SLC52A2Q9HAB3 445 aa16.54■□□□□ 0.24
TOP3A-206ENST00000489131 PAPPAQ13219 1627 aa16.54■□□□□ 0.24
TOP3A-206ENST00000489131 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
TOP3A-206ENST00000489131 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
TOP3A-206ENST00000489131 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
TOP3A-206ENST00000489131 BCAR3O75815 825 aa16.53■□□□□ 0.24
TOP3A-206ENST00000489131 FKBP8Q14318 412 aa16.53■□□□□ 0.24
TOP3A-206ENST00000489131 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
TOP3A-206ENST00000489131 PDE3AQ14432 1141 aa16.52■□□□□ 0.24
TOP3A-206ENST00000489131 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.24
TOP3A-206ENST00000489131 C8orf37Q96NL8 207 aa16.52■□□□□ 0.24
TOP3A-206ENST00000489131 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
TOP3A-206ENST00000489131 EIF4A1P60842 406 aaKnown RBP16.51■□□□□ 0.23
TOP3A-206ENST00000489131 ATRNO75882 1429 aa16.51■□□□□ 0.23
TOP3A-206ENST00000489131 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
TOP3A-206ENST00000489131 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
TOP3A-206ENST00000489131 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
TOP3A-206ENST00000489131 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
TOP3A-206ENST00000489131 GLI3P10071 1580 aa16.5■□□□□ 0.23
TOP3A-206ENST00000489131 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
TOP3A-206ENST00000489131 ARHGAP45Q92619 1136 aa16.49■□□□□ 0.23
TOP3A-206ENST00000489131 CHMP4AQ9BY43 222 aa16.49■□□□□ 0.23
TOP3A-206ENST00000489131 USP21Q9UK80 565 aa16.49■□□□□ 0.23
TOP3A-206ENST00000489131 EXOC5O00471 708 aa16.48■□□□□ 0.23
TOP3A-206ENST00000489131 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
TOP3A-206ENST00000489131 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
TOP3A-206ENST00000489131 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
TOP3A-206ENST00000489131 AFF2P51816 1311 aa16.46■□□□□ 0.23
TOP3A-206ENST00000489131 PLIN1O60240 522 aa16.46■□□□□ 0.23
TOP3A-206ENST00000489131 ONECUT3O60422 494 aaPredicted RBP16.46■□□□□ 0.23
TOP3A-206ENST00000489131 MS4A1P11836 297 aa16.46■□□□□ 0.23
TOP3A-206ENST00000489131 ZKSCAN2Q63HK3 967 aa16.46■□□□□ 0.23
TOP3A-206ENST00000489131 ZNF790Q6PG37 636 aa16.46■□□□□ 0.23
TOP3A-206ENST00000489131 NFATC2IPQ8NCF5 419 aa16.46■□□□□ 0.23
TOP3A-206ENST00000489131 BCL9O00512 1426 aa16.45■□□□□ 0.22
TOP3A-206ENST00000489131 ITGB4P16144 1822 aa16.45■□□□□ 0.22
TOP3A-206ENST00000489131 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
TOP3A-206ENST00000489131 CABP4P57796 275 aa16.45■□□□□ 0.22
TOP3A-206ENST00000489131 DDB1Q16531 1140 aa16.45■□□□□ 0.22
TOP3A-206ENST00000489131 MEX3CQ5U5Q3 659 aaKnown RBP16.45■□□□□ 0.22
TOP3A-206ENST00000489131 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
TOP3A-206ENST00000489131 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-206ENST00000489131 ATF7IPQ6VMQ6 1270 aa16.44■□□□□ 0.22
TOP3A-206ENST00000489131 DDX54Q8TDD1 881 aaKnown RBP16.44■□□□□ 0.22
TOP3A-206ENST00000489131 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
TOP3A-206ENST00000489131 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
TOP3A-206ENST00000489131 DOT1LQ8TEK3 1739 aa16.43■□□□□ 0.22
TOP3A-206ENST00000489131 ELL2O00472 640 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-206ENST00000489131 KCNQ3O43525 872 aa16.43■□□□□ 0.22
TOP3A-206ENST00000489131 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-206ENST00000489131 AAMPQ13685 434 aa16.43■□□□□ 0.22
TOP3A-206ENST00000489131 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
TOP3A-206ENST00000489131 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
TOP3A-206ENST00000489131 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-206ENST00000489131 TRPC5Q9UL62 973 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-206ENST00000489131 PTPRCP08575 1304 aa16.43■□□□□ 0.22
TOP3A-206ENST00000489131 TRIM27P14373 513 aa16.42■□□□□ 0.22
TOP3A-206ENST00000489131 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
TOP3A-206ENST00000489131 NOB1Q9ULX3 412 aaKnown RBP16.42■□□□□ 0.22
TOP3A-206ENST00000489131 C5P01031 1676 aa16.42■□□□□ 0.22
TOP3A-206ENST00000489131 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
TOP3A-206ENST00000489131 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
TOP3A-206ENST00000489131 RGS12O14924 1447 aa16.41■□□□□ 0.22
TOP3A-206ENST00000489131 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
TOP3A-206ENST00000489131 MARCH10Q8NA82 808 aaPredicted RBP16.4■□□□□ 0.22
TOP3A-206ENST00000489131 FRAT1Q92837 279 aaPredicted RBP16.4■□□□□ 0.22
TOP3A-206ENST00000489131 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
TOP3A-206ENST00000489131 CRBNQ96SW2 442 aa16.4■□□□□ 0.22
TOP3A-206ENST00000489131 N4BP2Q86UW6 1770 aaPredicted RBP16.4■□□□□ 0.22
TOP3A-206ENST00000489131 ABCC4O15439 1325 aa16.4■□□□□ 0.22
TOP3A-206ENST00000489131 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
TOP3A-206ENST00000489131 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
TOP3A-206ENST00000489131 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
TOP3A-206ENST00000489131 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-206ENST00000489131 API5Q9BZZ5 524 aaKnown RBP16.39■□□□□ 0.21
TOP3A-206ENST00000489131 TMOD3Q9NYL9 352 aa16.39■□□□□ 0.21
TOP3A-206ENST00000489131 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
TOP3A-206ENST00000489131 RLBP1P12271 317 aa16.38■□□□□ 0.21
TOP3A-206ENST00000489131 HDGFL1Q5TGJ6 251 aa16.38■□□□□ 0.21
TOP3A-206ENST00000489131 TTC5Q8N0Z6 440 aa16.38■□□□□ 0.21
TOP3A-206ENST00000489131 STK31Q9BXU1 1019 aa16.38■□□□□ 0.21
TOP3A-206ENST00000489131 ZNF831Q5JPB2 1677 aa16.37■□□□□ 0.21
TOP3A-206ENST00000489131 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
TOP3A-206ENST00000489131 SLC39A6Q13433 755 aa16.37■□□□□ 0.21
TOP3A-206ENST00000489131 MVPQ14764 893 aaKnown RBP16.37■□□□□ 0.21
TOP3A-206ENST00000489131 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
TOP3A-206ENST00000489131 PIGBQ92521 554 aa16.37■□□□□ 0.21
TOP3A-206ENST00000489131 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
TOP3A-206ENST00000489131 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
TOP3A-206ENST00000489131 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
TOP3A-206ENST00000489131 DBF4Q9UBU7 674 aaPredicted RBP16.36■□□□□ 0.21
TOP3A-206ENST00000489131 NHSQ6T4R5 1651 aa16.35■□□□□ 0.21
TOP3A-206ENST00000489131 ZNF772Q68DY9 489 aaPredicted RBP16.35■□□□□ 0.21
TOP3A-206ENST00000489131 FTSJ3Q8IY81 847 aaKnown RBP16.35■□□□□ 0.21
TOP3A-206ENST00000489131 TNNQ9UQP3 1299 aa16.35■□□□□ 0.21
TOP3A-206ENST00000489131 INTS3Q68E01 1043 aaKnown RBP16.34■□□□□ 0.21
TOP3A-206ENST00000489131 ATG3Q9NT62 314 aa16.34■□□□□ 0.21
TOP3A-206ENST00000489131 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
TOP3A-206ENST00000489131 FLIIQ13045 1269 aa16.33■□□□□ 0.2
TOP3A-206ENST00000489131 QTRT2Q9H974 415 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms