RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ATF5Q9Y2D1 282 aaPredicted RBP21.36■■□□□ 1.01
CTDSP1-209ENST00000488627 CASZ1Q86V15 1759 aa21.36■■□□□ 1.01
CTDSP1-209ENST00000488627 MTFR1LQ9H019 292 aa21.35■■□□□ 1.01
CTDSP1-209ENST00000488627 SLC52A2Q9HAB3 445 aa21.35■■□□□ 1.01
CTDSP1-209ENST00000488627 HMGB2P26583 209 aaKnown RBP21.34■■□□□ 1.01
CTDSP1-209ENST00000488627 LINC00116Q8NCU8 138 aa21.34■■□□□ 1.01
CTDSP1-209ENST00000488627 GAS2L2Q8NHY3 880 aa21.34■■□□□ 1.01
CTDSP1-209ENST00000488627 SGIP1Q9BQI5 828 aa21.34■■□□□ 1.01
CTDSP1-209ENST00000488627 ATP6V1AP38606 617 aa21.33■■□□□ 1.01
CTDSP1-209ENST00000488627 AMIGO3Q86WK7 504 aa21.33■■□□□ 1.01
CTDSP1-209ENST00000488627 COL23A1Q86Y22 540 aaPredicted RBP21.33■■□□□ 1.01
CTDSP1-209ENST00000488627 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
CTDSP1-209ENST00000488627 SLC16A10Q8TF71 515 aa21.32■■□□□ 1
CTDSP1-209ENST00000488627 GNAT3A8MTJ3 354 aa21.31■■□□□ 1
CTDSP1-209ENST00000488627 RBM42Q9BTD8 480 aaKnown RBP21.3■■□□□ 1
CTDSP1-209ENST00000488627 MAP3K5Q99683 1374 aa21.29■■□□□ 1
CTDSP1-209ENST00000488627 MRC1P22897 1456 aa21.28■■□□□ 1
CTDSP1-209ENST00000488627 PTCD1O75127 700 aaKnown RBP21.28■■□□□ 1
CTDSP1-209ENST00000488627 SMIM5Q71RC9 77 aa21.28■■□□□ 1
CTDSP1-209ENST00000488627 MYBBP1AQ9BQG0 1328 aaKnown RBP21.28■■□□□ 1
CTDSP1-209ENST00000488627 SLC39A6Q13433 755 aa21.27■■□□□ 1
CTDSP1-209ENST00000488627 AK7Q96M32 723 aa21.27■■□□□ 1
CTDSP1-209ENST00000488627 PLEKHF1Q96S99 279 aa21.27■■□□□ 1
CTDSP1-209ENST00000488627 PRKRIP1Q9H875 184 aaPredicted RBP21.27■■□□□ 1
CTDSP1-209ENST00000488627 ADAMTS7Q9UKP4 1686 aa21.26■□□□□ 0.99
CTDSP1-209ENST00000488627 ZNF316A6NFI3 1004 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-209ENST00000488627 FLAD1Q8NFF5 587 aa21.26■□□□□ 0.99
CTDSP1-209ENST00000488627 CEMIPQ8WUJ3 1361 aa21.25■□□□□ 0.99
CTDSP1-209ENST00000488627 RC3H1Q5TC82 1133 aaKnown RBP21.25■□□□□ 0.99
CTDSP1-209ENST00000488627 PPP1R1BQ9UD71 204 aaPredicted RBP21.25■□□□□ 0.99
CTDSP1-209ENST00000488627 SCN11AQ9UI33 1791 aa21.24■□□□□ 0.99
CTDSP1-209ENST00000488627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-209ENST00000488627 C5P01031 1676 aa21.24■□□□□ 0.99
CTDSP1-209ENST00000488627 C4BP0C0L5 1744 aa21.24■□□□□ 0.99
CTDSP1-209ENST00000488627 SSFA2P28290 1259 aa21.23■□□□□ 0.99
CTDSP1-209ENST00000488627 QSER1Q2KHR3 1735 aa21.22■□□□□ 0.99
CTDSP1-209ENST00000488627 GNPATO15228 680 aa21.22■□□□□ 0.99
CTDSP1-209ENST00000488627 MSH5O43196 834 aa21.22■□□□□ 0.99
CTDSP1-209ENST00000488627 CNTNAP4Q9C0A0 1308 aa21.22■□□□□ 0.99
CTDSP1-209ENST00000488627 TAF1LQ8IZX4 1826 aa21.22■□□□□ 0.99
CTDSP1-209ENST00000488627 HTATSF1O43719 755 aaKnown RBP21.21■□□□□ 0.99
CTDSP1-209ENST00000488627 PHF14O94880 888 aa21.21■□□□□ 0.99
CTDSP1-209ENST00000488627 TEFQ10587 303 aa21.21■□□□□ 0.99
CTDSP1-209ENST00000488627 ARXQ96QS3 562 aa21.21■□□□□ 0.99
CTDSP1-209ENST00000488627 TUBGCP6Q96RT7 1819 aa21.2■□□□□ 0.98
CTDSP1-209ENST00000488627 ZNF831Q5JPB2 1677 aa21.19■□□□□ 0.98
CTDSP1-209ENST00000488627 RPS6KA4O75676 772 aa21.19■□□□□ 0.98
CTDSP1-209ENST00000488627 CRKLP46109 303 aaKnown RBP21.19■□□□□ 0.98
CTDSP1-209ENST00000488627 DCTN1Q14203 1278 aa21.19■□□□□ 0.98
CTDSP1-209ENST00000488627 ZNF790Q6PG37 636 aa21.19■□□□□ 0.98
CTDSP1-209ENST00000488627 MCM10Q7L590 875 aa21.19■□□□□ 0.98
CTDSP1-209ENST00000488627 DNAJC10Q8IXB1 793 aa21.19■□□□□ 0.98
CTDSP1-209ENST00000488627 MSL1Q68DK7 614 aa21.18■□□□□ 0.98
CTDSP1-209ENST00000488627 INTS5Q6P9B9 1019 aaKnown RBP21.18■□□□□ 0.98
CTDSP1-209ENST00000488627 FHDC1Q9C0D6 1143 aaPredicted RBP21.18■□□□□ 0.98
CTDSP1-209ENST00000488627 RTCBQ9Y3I0 505 aaKnown RBP21.18■□□□□ 0.98
CTDSP1-209ENST00000488627 KCPQ6ZWJ8 1503 aa21.18■□□□□ 0.98
CTDSP1-209ENST00000488627 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
CTDSP1-209ENST00000488627 RTF1Q92541 710 aaKnown RBP21.17■□□□□ 0.98
CTDSP1-209ENST00000488627 ZNF496Q96IT1 587 aaPredicted RBP21.17■□□□□ 0.98
CTDSP1-209ENST00000488627 SYT17Q9BSW7 474 aa21.17■□□□□ 0.98
CTDSP1-209ENST00000488627 PNNQ9H307 717 aaKnown RBP21.17■□□□□ 0.98
CTDSP1-209ENST00000488627 KCNQ3O43525 872 aa21.16■□□□□ 0.98
CTDSP1-209ENST00000488627 CYP19A1P11511 503 aaPredicted RBP21.16■□□□□ 0.98
CTDSP1-209ENST00000488627 POLD1P28340 1107 aa21.16■□□□□ 0.98
CTDSP1-209ENST00000488627 NFE2L2Q16236 605 aa21.16■□□□□ 0.98
CTDSP1-209ENST00000488627 TRAPPC3LQ5T215 181 aa21.16■□□□□ 0.98
CTDSP1-209ENST00000488627 ARHGEF1Q92888 912 aaKnown RBP21.16■□□□□ 0.98
CTDSP1-209ENST00000488627 ADRA2BP18089 450 aa21.15■□□□□ 0.98
CTDSP1-209ENST00000488627 BTBD11A6QL63 1104 aa21.14■□□□□ 0.97
CTDSP1-209ENST00000488627 NEFMP07197 916 aa21.14■□□□□ 0.97
CTDSP1-209ENST00000488627 TTC5Q8N0Z6 440 aa21.14■□□□□ 0.97
CTDSP1-209ENST00000488627 UBR3Q6ZT12 1888 aa21.13■□□□□ 0.97
CTDSP1-209ENST00000488627 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
CTDSP1-209ENST00000488627 CCDC87Q9NVE4 849 aa21.12■□□□□ 0.97
CTDSP1-209ENST00000488627 ADAMTS8Q9UP79 889 aa21.12■□□□□ 0.97
CTDSP1-209ENST00000488627 HEG1Q9ULI3 1381 aa21.11■□□□□ 0.97
CTDSP1-209ENST00000488627 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
CTDSP1-209ENST00000488627 TAF7Q15545 349 aaPredicted RBP21.11■□□□□ 0.97
CTDSP1-209ENST00000488627 CICQ96RK0 1608 aaPredicted RBP21.11■□□□□ 0.97
CTDSP1-209ENST00000488627 COL5A3P25940 1745 aaPredicted RBP21.1■□□□□ 0.97
CTDSP1-209ENST00000488627 FMNL2Q96PY5 1086 aa21.1■□□□□ 0.97
CTDSP1-209ENST00000488627 MYH14Q7Z406 1995 aaKnown RBP21.1■□□□□ 0.97
CTDSP1-209ENST00000488627 TJP1Q07157 1748 aa21.09■□□□□ 0.97
CTDSP1-209ENST00000488627 GYS1P13807 737 aa21.09■□□□□ 0.97
CTDSP1-209ENST00000488627 RFC4P35249 363 aa21.09■□□□□ 0.97
CTDSP1-209ENST00000488627 TMPOP42166 694 aaKnown RBP21.09■□□□□ 0.97
CTDSP1-209ENST00000488627 THUMPD2Q9BTF0 503 aaKnown RBP21.09■□□□□ 0.97
CTDSP1-209ENST00000488627 ZBTB1Q9Y2K1 713 aa21.09■□□□□ 0.97
CTDSP1-209ENST00000488627 SOS1Q07889 1333 aaPredicted RBP21.08■□□□□ 0.97
CTDSP1-209ENST00000488627 WDR43Q15061 677 aaKnown RBP eCLIP21.08■□□□□ 0.97
CTDSP1-209ENST00000488627 CCDC184Q52MB2 194 aa21.08■□□□□ 0.97
CTDSP1-209ENST00000488627 CCDC146Q8IYE0 955 aa21.08■□□□□ 0.97
CTDSP1-209ENST00000488627 TEX13AQ9BXU3 409 aaPredicted RBP21.08■□□□□ 0.97
CTDSP1-209ENST00000488627 MIS18AQ9NYP9 233 aa21.08■□□□□ 0.97
CTDSP1-209ENST00000488627 STARD3NLO95772 234 aa21.07■□□□□ 0.96
CTDSP1-209ENST00000488627 RIPK4P57078 832 aa21.07■□□□□ 0.96
CTDSP1-209ENST00000488627 NLGN1Q8N2Q7 840 aa21.07■□□□□ 0.96
CTDSP1-209ENST00000488627 RUNDC1Q96C34 613 aa21.07■□□□□ 0.96
CTDSP1-209ENST00000488627 SIPA1L3O60292 1781 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms