RNA–Protein interactions for RNA: ENST00000484699.1

CLK2-206, Transcript of CDC like kinase 2, humanhuman

TSL 2

Gene CLK2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-206ENST00000484699 DDX54Q8TDD1 881 aaKnown RBP18.36■□□□□ 0.53
CLK2-206ENST00000484699 BTBD11A6QL63 1104 aa18.35■□□□□ 0.53
CLK2-206ENST00000484699 RARSP54136 660 aaKnown RBP18.35■□□□□ 0.53
CLK2-206ENST00000484699 ZNF772Q68DY9 489 aaPredicted RBP18.35■□□□□ 0.53
CLK2-206ENST00000484699 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.35■□□□□ 0.53
CLK2-206ENST00000484699 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
CLK2-206ENST00000484699 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
CLK2-206ENST00000484699 NEFLP07196 543 aa18.34■□□□□ 0.53
CLK2-206ENST00000484699 HOXB7P09629 217 aa18.34■□□□□ 0.53
CLK2-206ENST00000484699 CABP4P57796 275 aa18.34■□□□□ 0.53
CLK2-206ENST00000484699 TWISTNBQ3B726 338 aaPredicted RBP18.34■□□□□ 0.53
CLK2-206ENST00000484699 RRP1P56182 461 aaKnown RBP18.33■□□□□ 0.52
CLK2-206ENST00000484699 FAM98CQ17RN3 349 aaKnown RBP18.33■□□□□ 0.52
CLK2-206ENST00000484699 VAMP4O75379 141 aa18.32■□□□□ 0.52
CLK2-206ENST00000484699 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
CLK2-206ENST00000484699 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
CLK2-206ENST00000484699 NFATC2IPQ8NCF5 419 aa18.31■□□□□ 0.52
CLK2-206ENST00000484699 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
CLK2-206ENST00000484699 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
CLK2-206ENST00000484699 TOGARAM1Q9Y4F4 1720 aa18.31■□□□□ 0.52
CLK2-206ENST00000484699 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
CLK2-206ENST00000484699 EIF4A1P60842 406 aaKnown RBP18.3■□□□□ 0.52
CLK2-206ENST00000484699 BCL9O00512 1426 aa18.3■□□□□ 0.52
CLK2-206ENST00000484699 PAPPAQ13219 1627 aa18.3■□□□□ 0.52
CLK2-206ENST00000484699 KIF16BQ96L93 1317 aa18.29■□□□□ 0.52
CLK2-206ENST00000484699 ZNF790Q6PG37 636 aa18.29■□□□□ 0.52
CLK2-206ENST00000484699 TSPYL6Q8N831 410 aa18.29■□□□□ 0.52
CLK2-206ENST00000484699 TTC5Q8N0Z6 440 aa18.28■□□□□ 0.52
CLK2-206ENST00000484699 MARCH10Q8NA82 808 aaPredicted RBP18.28■□□□□ 0.52
CLK2-206ENST00000484699 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
CLK2-206ENST00000484699 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
CLK2-206ENST00000484699 ERICH6BQ5W0A0 696 aa18.27■□□□□ 0.52
CLK2-206ENST00000484699 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.52
CLK2-206ENST00000484699 BCAR3O75815 825 aa18.26■□□□□ 0.51
CLK2-206ENST00000484699 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
CLK2-206ENST00000484699 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
CLK2-206ENST00000484699 A0A0G2JS52 829 aa18.25■□□□□ 0.51
CLK2-206ENST00000484699 MS4A1P11836 297 aa18.25■□□□□ 0.51
CLK2-206ENST00000484699 RBM6P78332 1123 aaKnown RBP18.25■□□□□ 0.51
CLK2-206ENST00000484699 MYT1Q01538 1121 aa18.25■□□□□ 0.51
CLK2-206ENST00000484699 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
CLK2-206ENST00000484699 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
CLK2-206ENST00000484699 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
CLK2-206ENST00000484699 IPO8O15397 1037 aaKnown RBP18.24■□□□□ 0.51
CLK2-206ENST00000484699 CCDC30Q5VVM6 783 aa18.24■□□□□ 0.51
CLK2-206ENST00000484699 KCNQ3O43525 872 aa18.23■□□□□ 0.51
CLK2-206ENST00000484699 GIGYF1O75420 1035 aaPredicted RBP18.23■□□□□ 0.51
CLK2-206ENST00000484699 PDE3AQ14432 1141 aa18.23■□□□□ 0.51
CLK2-206ENST00000484699 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
CLK2-206ENST00000484699 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
CLK2-206ENST00000484699 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
CLK2-206ENST00000484699 ITGB4P16144 1822 aa18.22■□□□□ 0.51
CLK2-206ENST00000484699 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
CLK2-206ENST00000484699 SEPT12Q8IYM1 358 aa18.22■□□□□ 0.51
CLK2-206ENST00000484699 STK31Q9BXU1 1019 aa18.22■□□□□ 0.51
CLK2-206ENST00000484699 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
CLK2-206ENST00000484699 SLC39A6Q13433 755 aa18.21■□□□□ 0.51
CLK2-206ENST00000484699 HDGFL1Q5TGJ6 251 aa18.21■□□□□ 0.51
CLK2-206ENST00000484699 ZKSCAN2Q63HK3 967 aa18.21■□□□□ 0.51
CLK2-206ENST00000484699 PIGBQ92521 554 aa18.21■□□□□ 0.51
CLK2-206ENST00000484699 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
CLK2-206ENST00000484699 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
CLK2-206ENST00000484699 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
CLK2-206ENST00000484699 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
CLK2-206ENST00000484699 PTPRCP08575 1304 aa18.2■□□□□ 0.5
CLK2-206ENST00000484699 PRIM1P49642 420 aaKnown RBP18.19■□□□□ 0.5
CLK2-206ENST00000484699 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
CLK2-206ENST00000484699 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
CLK2-206ENST00000484699 FKBP8Q14318 412 aa18.18■□□□□ 0.5
CLK2-206ENST00000484699 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
CLK2-206ENST00000484699 FRAT1Q92837 279 aaPredicted RBP18.18■□□□□ 0.5
CLK2-206ENST00000484699 ERBB4Q15303 1308 aa18.18■□□□□ 0.5
CLK2-206ENST00000484699 PLIN1O60240 522 aa18.17■□□□□ 0.5
CLK2-206ENST00000484699 RXRBP28702 533 aa18.17■□□□□ 0.5
CLK2-206ENST00000484699 SMARCC1Q92922 1105 aaPredicted RBP18.17■□□□□ 0.5
CLK2-206ENST00000484699 SYTL4Q96C24 671 aaPredicted RBP18.17■□□□□ 0.5
CLK2-206ENST00000484699 TEX13AQ9BXU3 409 aaPredicted RBP18.17■□□□□ 0.5
CLK2-206ENST00000484699 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
CLK2-206ENST00000484699 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
CLK2-206ENST00000484699 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
CLK2-206ENST00000484699 NOB1Q9ULX3 412 aaKnown RBP18.17■□□□□ 0.5
CLK2-206ENST00000484699 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
CLK2-206ENST00000484699 CICQ96RK0 1608 aaPredicted RBP18.16■□□□□ 0.5
CLK2-206ENST00000484699 C5P01031 1676 aa18.16■□□□□ 0.5
CLK2-206ENST00000484699 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
CLK2-206ENST00000484699 TRIM27P14373 513 aa18.15■□□□□ 0.5
CLK2-206ENST00000484699 DZIP1LQ8IYY4 767 aaKnown RBP18.15■□□□□ 0.5
CLK2-206ENST00000484699 ASAP1Q9ULH1 1129 aa18.15■□□□□ 0.5
CLK2-206ENST00000484699 AAMPQ13685 434 aa18.14■□□□□ 0.49
CLK2-206ENST00000484699 KRT27Q7Z3Y8 459 aa18.14■□□□□ 0.49
CLK2-206ENST00000484699 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
CLK2-206ENST00000484699 ZNF831Q5JPB2 1677 aa18.14■□□□□ 0.49
CLK2-206ENST00000484699 EIF2S2P20042 333 aaKnown RBP18.13■□□□□ 0.49
CLK2-206ENST00000484699 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
CLK2-206ENST00000484699 ACSBG1Q96GR2 724 aa18.13■□□□□ 0.49
CLK2-206ENST00000484699 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLK2-206ENST00000484699 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
CLK2-206ENST00000484699 PTCD1O75127 700 aaKnown RBP18.12■□□□□ 0.49
CLK2-206ENST00000484699 IRX6P78412 446 aaPredicted RBP18.12■□□□□ 0.49
CLK2-206ENST00000484699 CHPF2Q9P2E5 772 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms