RNA–Protein interactions for RNA: ENST00000484699.1

CLK2-206, Transcript of CDC like kinase 2, humanhuman

TSL 2

Gene CLK2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-206ENST00000484699 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
CLK2-206ENST00000484699 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
CLK2-206ENST00000484699 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
CLK2-206ENST00000484699 ABCC9O60706 1549 aa27.64■■■□□ 2.02
CLK2-206ENST00000484699 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
CLK2-206ENST00000484699 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
CLK2-206ENST00000484699 NACADO15069 1562 aa27.22■■□□□ 1.95
CLK2-206ENST00000484699 DCAF8L2P0C7V8 631 aa27.19■■□□□ 1.94
CLK2-206ENST00000484699 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
CLK2-206ENST00000484699 SCRIBQ14160 1630 aa26.55■■□□□ 1.84
CLK2-206ENST00000484699 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
CLK2-206ENST00000484699 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
CLK2-206ENST00000484699 BICRAQ9NZM4 1560 aa26.14■■□□□ 1.78
CLK2-206ENST00000484699 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
CLK2-206ENST00000484699 CECR2Q9BXF3 1484 aa25.65■■□□□ 1.7
CLK2-206ENST00000484699 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
CLK2-206ENST00000484699 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
CLK2-206ENST00000484699 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
CLK2-206ENST00000484699 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
CLK2-206ENST00000484699 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
CLK2-206ENST00000484699 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
CLK2-206ENST00000484699 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
CLK2-206ENST00000484699 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
CLK2-206ENST00000484699 WIZO95785 1651 aa25.23■■□□□ 1.63
CLK2-206ENST00000484699 ATAD2BQ9ULI0 1458 aa25.19■■□□□ 1.62
CLK2-206ENST00000484699 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
CLK2-206ENST00000484699 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
CLK2-206ENST00000484699 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
CLK2-206ENST00000484699 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
CLK2-206ENST00000484699 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
CLK2-206ENST00000484699 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
CLK2-206ENST00000484699 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
CLK2-206ENST00000484699 CFTRP13569 1480 aa24.41■■□□□ 1.5
CLK2-206ENST00000484699 CADPSQ9ULU8 1353 aa24.38■■□□□ 1.49
CLK2-206ENST00000484699 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
CLK2-206ENST00000484699 PRDM2Q13029 1718 aa24.28■■□□□ 1.48
CLK2-206ENST00000484699 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
CLK2-206ENST00000484699 NESP48681 1621 aa24.13■■□□□ 1.45
CLK2-206ENST00000484699 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
CLK2-206ENST00000484699 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
CLK2-206ENST00000484699 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
CLK2-206ENST00000484699 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
CLK2-206ENST00000484699 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
CLK2-206ENST00000484699 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
CLK2-206ENST00000484699 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
CLK2-206ENST00000484699 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
CLK2-206ENST00000484699 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
CLK2-206ENST00000484699 KIF21AQ7Z4S6 1674 aa23.9■■□□□ 1.42
CLK2-206ENST00000484699 CUX1P39880 1505 aa23.88■■□□□ 1.41
CLK2-206ENST00000484699 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
CLK2-206ENST00000484699 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
CLK2-206ENST00000484699 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
CLK2-206ENST00000484699 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
CLK2-206ENST00000484699 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
CLK2-206ENST00000484699 WDR62O43379 1518 aa23.71■■□□□ 1.39
CLK2-206ENST00000484699 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
CLK2-206ENST00000484699 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
CLK2-206ENST00000484699 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.38
CLK2-206ENST00000484699 EEA1Q15075 1411 aa23.63■■□□□ 1.37
CLK2-206ENST00000484699 SOGA1O94964 1423 aa23.54■■□□□ 1.36
CLK2-206ENST00000484699 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
CLK2-206ENST00000484699 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
CLK2-206ENST00000484699 CUX2O14529 1486 aa23.48■■□□□ 1.35
CLK2-206ENST00000484699 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
CLK2-206ENST00000484699 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
CLK2-206ENST00000484699 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
CLK2-206ENST00000484699 TARBP1Q13395 1621 aaKnown RBP23.47■■□□□ 1.35
CLK2-206ENST00000484699 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
CLK2-206ENST00000484699 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
CLK2-206ENST00000484699 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
CLK2-206ENST00000484699 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
CLK2-206ENST00000484699 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
CLK2-206ENST00000484699 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
CLK2-206ENST00000484699 KIF21BO75037 1637 aa23.28■■□□□ 1.32
CLK2-206ENST00000484699 IGF1RP08069 1367 aa23.27■■□□□ 1.31
CLK2-206ENST00000484699 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
CLK2-206ENST00000484699 PRXQ9BXM0 1461 aa23.24■■□□□ 1.31
CLK2-206ENST00000484699 CUL7Q14999 1698 aa23.22■■□□□ 1.31
CLK2-206ENST00000484699 ZNF608Q9ULD9 1512 aaPredicted RBP23.22■■□□□ 1.31
CLK2-206ENST00000484699 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
CLK2-206ENST00000484699 GRIN2BQ13224 1484 aa23.21■■□□□ 1.31
CLK2-206ENST00000484699 GOLGA3Q08378 1498 aa23.19■■□□□ 1.3
CLK2-206ENST00000484699 AQRO60306 1485 aaKnown RBP eCLIP23.18■■□□□ 1.34e-9■■■□□ 15
CLK2-206ENST00000484699 PBRM1Q86U86 1689 aa23.18■■□□□ 1.3
CLK2-206ENST00000484699 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
CLK2-206ENST00000484699 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
CLK2-206ENST00000484699 LOC105371045A0A1W2PR82 267 aa23.09■■□□□ 1.29
CLK2-206ENST00000484699 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
CLK2-206ENST00000484699 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.29
CLK2-206ENST00000484699 ADAMTS12P58397 1594 aa23.08■■□□□ 1.29
CLK2-206ENST00000484699 TNIKQ9UKE5 1360 aa23.04■■□□□ 1.28
CLK2-206ENST00000484699 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
CLK2-206ENST00000484699 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
CLK2-206ENST00000484699 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
CLK2-206ENST00000484699 EHMT2Q96KQ7 1210 aa22.91■■□□□ 1.26
CLK2-206ENST00000484699 GRIN2AQ12879 1464 aa22.9■■□□□ 1.26
CLK2-206ENST00000484699 CTTNBP2Q8WZ74 1663 aa22.85■■□□□ 1.25
CLK2-206ENST00000484699 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
CLK2-206ENST00000484699 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
CLK2-206ENST00000484699 NUP160Q12769 1436 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms