RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ZBTB3Q9H5J0 574 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
SMPD4-218ENST00000482171 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
SMPD4-218ENST00000482171 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-218ENST00000482171 PTPRCP08575 1304 aa13.58□□□□□ -0.24
SMPD4-218ENST00000482171 ZNF771Q7L3S4 317 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-218ENST00000482171 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
SMPD4-218ENST00000482171 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
SMPD4-218ENST00000482171 C8orf34Q49A92 452 aa13.57□□□□□ -0.24
SMPD4-218ENST00000482171 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
SMPD4-218ENST00000482171 C16orf71Q8IYS4 520 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-218ENST00000482171 BCL11BQ9C0K0 894 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-218ENST00000482171 EDC4Q6P2E9 1401 aaKnown RBP13.57□□□□□ -0.24
SMPD4-218ENST00000482171 CPLX1O14810 134 aa13.57□□□□□ -0.24
SMPD4-218ENST00000482171 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
SMPD4-218ENST00000482171 KIF3AQ9Y496 699 aa13.57□□□□□ -0.24
SMPD4-218ENST00000482171 SBNO2Q9Y2G9 1366 aa13.57□□□□□ -0.24
SMPD4-218ENST00000482171 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMPD4-218ENST00000482171 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
SMPD4-218ENST00000482171 G2E3Q7L622 706 aa13.56□□□□□ -0.24
SMPD4-218ENST00000482171 KIF1BPQ96EK5 621 aa13.56□□□□□ -0.24
SMPD4-218ENST00000482171 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
SMPD4-218ENST00000482171 ZFYVE9O95405 1425 aa13.56□□□□□ -0.24
SMPD4-218ENST00000482171 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMPD4-218ENST00000482171 TRDNQ13061 729 aa13.56□□□□□ -0.24
SMPD4-218ENST00000482171 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
SMPD4-218ENST00000482171 NPHP3Q7Z494 1330 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 ATP6V1DQ9Y5K8 247 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 HECW2Q9P2P5 1572 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 A0A087WZG4 1122 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 K7ELQ4 463 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-218ENST00000482171 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 ARHGAP45Q92619 1136 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 MSH6P52701 1360 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 TNNT3P45378 269 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-218ENST00000482171 TBC1D9Q6ZT07 1266 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 STK11IPQ8N1F8 1099 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 BCORL1Q5H9F3 1711 aa13.55□□□□□ -0.24
SMPD4-218ENST00000482171 GPTP24298 496 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 STK3Q13188 491 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 UBE3BQ7Z3V4 1068 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 RALYLQ86SE5 291 aaKnown RBP13.54□□□□□ -0.24
SMPD4-218ENST00000482171 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 FBXW7Q969H0 707 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 HDAC1Q13547 482 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-218ENST00000482171 CEP126Q9P2H0 1117 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 KDM2BQ8NHM5 1336 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
SMPD4-218ENST00000482171 ZBTB40Q9NUA8 1239 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
SMPD4-218ENST00000482171 ZSCAN30Q86W11 494 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 UQCRHLA0A096LP55 91 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 UQCRHP07919 91 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 NFXL1Q6ZNB6 911 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
SMPD4-218ENST00000482171 PLXNC1O60486 1568 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 SEC24BO95487 1268 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 TTC39AQ5SRH9 613 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 IP6K1Q92551 441 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 LGR6Q9HBX8 967 aa13.53□□□□□ -0.24
SMPD4-218ENST00000482171 NUCB1Q02818 461 aa13.52□□□□□ -0.24
SMPD4-218ENST00000482171 COPS6Q7L5N1 327 aa13.52□□□□□ -0.24
SMPD4-218ENST00000482171 MTERF4Q7Z6M4 381 aaKnown RBP13.52□□□□□ -0.24
SMPD4-218ENST00000482171 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.24
SMPD4-218ENST00000482171 ABCC3O15438 1527 aa13.52□□□□□ -0.24
SMPD4-218ENST00000482171 PIK3R4Q99570 1358 aa13.52□□□□□ -0.24
SMPD4-218ENST00000482171 STARD3NLO95772 234 aa13.52□□□□□ -0.25
SMPD4-218ENST00000482171 CCDC158Q5M9N0 1113 aa13.52□□□□□ -0.25
SMPD4-218ENST00000482171 SYNE3Q6ZMZ3 975 aa13.52□□□□□ -0.25
SMPD4-218ENST00000482171 CLTCL1P53675 1640 aa13.52□□□□□ -0.25
SMPD4-218ENST00000482171 IQGAP3Q86VI3 1631 aa13.52□□□□□ -0.25
SMPD4-218ENST00000482171 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.25
SMPD4-218ENST00000482171 CPLX2Q6PUV4 134 aaKnown RBP13.52□□□□□ -0.25
SMPD4-218ENST00000482171 XAGE3Q8WTP9 111 aa13.52□□□□□ -0.25
SMPD4-218ENST00000482171 CFAP74Q9C0B2 1584 aa13.52□□□□□ -0.25
SMPD4-218ENST00000482171 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 MYOM2P54296 1465 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 ROBO2Q9HCK4 1378 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 MPHOSPH8Q99549 860 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 RRAGDQ9NQL2 400 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-218ENST00000482171 KIF1BO60333 1816 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 RAD21O60216 631 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 CLCN1P35523 988 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 ANKRD44Q8N8A2 993 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
SMPD4-218ENST00000482171 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
SMPD4-218ENST00000482171 RASSF8Q8NHQ8 419 aa13.5□□□□□ -0.25
SMPD4-218ENST00000482171 PODXL2Q9NZ53 605 aa13.5□□□□□ -0.25
SMPD4-218ENST00000482171 EFCAB6Q5THR3 1501 aa13.5□□□□□ -0.25
SMPD4-218ENST00000482171 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
SMPD4-218ENST00000482171 CWF19L2Q2TBE0 894 aaKnown RBP13.5□□□□□ -0.25
SMPD4-218ENST00000482171 TBC1D32Q96NH3 1257 aa13.5□□□□□ -0.25
SMPD4-218ENST00000482171 FIBPO43427 364 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms