RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
DDX39B-219ENST00000481456 GLRX3O76003 335 aaKnown RBP13.63□□□□□ -0.23
DDX39B-219ENST00000481456 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
DDX39B-219ENST00000481456 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 F6X3S4 739 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 TXNDC2Q86VQ3 553 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 LMBRD1Q9NUN5 540 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 PRPF40BQ6NWY9 871 aaKnown RBP13.63□□□□□ -0.23
DDX39B-219ENST00000481456 GAS2L3Q86XJ1 694 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 ACBD3Q9H3P7 528 aa13.63□□□□□ -0.23
DDX39B-219ENST00000481456 C16orf45Q96MC5 204 aaPredicted RBP13.63□□□□□ -0.23
DDX39B-219ENST00000481456 FERMT3Q86UX7 667 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 NME9Q86XW9 330 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 DDX19AQ9NUU7 478 aaKnown RBP13.62□□□□□ -0.23
DDX39B-219ENST00000481456 NEMFO60524 1076 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 GJB2P29033 226 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 FILIP1Q7Z7B0 1213 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 GTPBP4Q9BZE4 634 aaKnown RBP13.62□□□□□ -0.23
DDX39B-219ENST00000481456 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 TSR1Q2NL82 804 aaKnown RBP13.62□□□□□ -0.23
DDX39B-219ENST00000481456 FANCAO15360 1455 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 TRAPPC8Q9Y2L5 1435 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 ME1P48163 572 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 KRT32Q14532 448 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 RIC3Q7Z5B4 369 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
DDX39B-219ENST00000481456 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 STK38Q15208 465 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 AACSQ86V21 672 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 MEIS3Q99687 375 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 PAXBP1Q9Y5B6 917 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
DDX39B-219ENST00000481456 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 ZFYVE9O95405 1425 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 TRDNQ13061 729 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 HSP90B2PQ58FF3 399 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 TTC12Q9H892 705 aaPredicted RBP13.61□□□□□ -0.23
DDX39B-219ENST00000481456 TSHZ3Q63HK5 1081 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 CCDC70Q6NSX1 233 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 CEP85Q6P2H3 762 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 KIF18AQ8NI77 898 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
DDX39B-219ENST00000481456 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
DDX39B-219ENST00000481456 PTPRTO14522 1441 aa13.61□□□□□ -0.23
DDX39B-219ENST00000481456 PDILTQ8N807 584 aa13.6□□□□□ -0.23
DDX39B-219ENST00000481456 TSPYL6Q8N831 410 aa13.6□□□□□ -0.23
DDX39B-219ENST00000481456 ABCC10Q5T3U5 1492 aa13.6□□□□□ -0.23
DDX39B-219ENST00000481456 NLRP6P59044 892 aa13.6□□□□□ -0.23
DDX39B-219ENST00000481456 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
DDX39B-219ENST00000481456 SETQ01105 290 aaPredicted RBP13.6□□□□□ -0.23
DDX39B-219ENST00000481456 TOMM22Q9NS69 142 aa13.6□□□□□ -0.23
DDX39B-219ENST00000481456 ZNF330Q9Y3S2 320 aaPredicted RBP13.6□□□□□ -0.23
DDX39B-219ENST00000481456 CKAP2LQ8IYA6 745 aa13.6□□□□□ -0.23
DDX39B-219ENST00000481456 TRPM1Q7Z4N2 1603 aa13.6□□□□□ -0.23
DDX39B-219ENST00000481456 AIMP1Q12904 312 aaKnown RBP13.6□□□□□ -0.23
DDX39B-219ENST00000481456 DNAJC2Q99543 621 aaKnown RBP13.59□□□□□ -0.23
DDX39B-219ENST00000481456 RALYLQ86SE5 291 aaKnown RBP13.59□□□□□ -0.23
DDX39B-219ENST00000481456 AK7Q96M32 723 aa13.59□□□□□ -0.23
DDX39B-219ENST00000481456 ANKRD20A12PQ8NF67 263 aa13.59□□□□□ -0.23
DDX39B-219ENST00000481456 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
DDX39B-219ENST00000481456 DHX16O60231 1041 aaKnown RBP13.59□□□□□ -0.23
DDX39B-219ENST00000481456 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
DDX39B-219ENST00000481456 RASSF8Q8NHQ8 419 aa13.59□□□□□ -0.23
DDX39B-219ENST00000481456 CTAGE5O15320 804 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 CBFA2T2O43439 604 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 CAVIN2O95810 425 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 F13A1P00488 732 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 MYRIPQ8NFW9 859 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 FAM200AQ8TCP9 573 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
DDX39B-219ENST00000481456 ERICH4A6NGS2 130 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 FLIIQ13045 1269 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 ANO10Q9NW15 660 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
DDX39B-219ENST00000481456 SERPINC1P01008 464 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 KDM4AO75164 1064 aa13.58□□□□□ -0.24
DDX39B-219ENST00000481456 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
DDX39B-219ENST00000481456 NEUROD6Q96NK8 337 aa13.57□□□□□ -0.24
DDX39B-219ENST00000481456 PES1O00541 588 aaKnown RBP13.57□□□□□ -0.24
DDX39B-219ENST00000481456 AKAP17AQ02040 695 aaKnown RBP13.57□□□□□ -0.24
DDX39B-219ENST00000481456 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
DDX39B-219ENST00000481456 LEKR1Q6ZMV7 388 aa13.57□□□□□ -0.24
DDX39B-219ENST00000481456 SMTNL1A8MU46 457 aa13.57□□□□□ -0.24
DDX39B-219ENST00000481456 UBXN4Q92575 508 aa13.57□□□□□ -0.24
DDX39B-219ENST00000481456 TMX4Q9H1E5 349 aaPredicted RBP13.57□□□□□ -0.24
DDX39B-219ENST00000481456 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
DDX39B-219ENST00000481456 TTC37Q6PGP7 1564 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 CLASP1Q7Z460 1538 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 ERCC4Q92889 916 aaPredicted RBP13.56□□□□□ -0.24
DDX39B-219ENST00000481456 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms