RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 ESF1Q9H501 851 aaKnown RBP6.55□□□□□ -1.36
NPHP3-207ENST00000476742 ALG2Q9H553 416 aa6.55□□□□□ -1.36
NPHP3-207ENST00000476742 ERVH48-1M5A8F1 160 aa6.54□□□□□ -1.36
NPHP3-207ENST00000476742 PAX4O43316 350 aa6.54□□□□□ -1.36
NPHP3-207ENST00000476742 GAS6Q14393 721 aa6.54□□□□□ -1.36
NPHP3-207ENST00000476742 HDGFL1Q5TGJ6 251 aa6.54□□□□□ -1.36
NPHP3-207ENST00000476742 FMNL2Q96PY5 1086 aa6.54□□□□□ -1.36
NPHP3-207ENST00000476742 ZFAND3Q9H8U3 227 aa6.54□□□□□ -1.36
NPHP3-207ENST00000476742 LRRC4BQ9NT99 713 aa6.54□□□□□ -1.36
NPHP3-207ENST00000476742 ITPKCQ96DU7 683 aa6.53□□□□□ -1.36
NPHP3-207ENST00000476742 CALR3Q96L12 384 aaKnown RBP6.53□□□□□ -1.36
NPHP3-207ENST00000476742 PCDHB11Q9Y5F2 797 aa6.53□□□□□ -1.36
NPHP3-207ENST00000476742 DOC2BQ14184 412 aa6.52□□□□□ -1.37
NPHP3-207ENST00000476742 GLMNQ92990 594 aa6.52□□□□□ -1.37
NPHP3-207ENST00000476742 ZNF777Q9ULD5 760 aaPredicted RBP6.52□□□□□ -1.37
NPHP3-207ENST00000476742 MYCP01106 439 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-207ENST00000476742 MAP7D1Q3KQU3 841 aa6.51□□□□□ -1.37
NPHP3-207ENST00000476742 CD163Q86VB7 1156 aa6.51□□□□□ -1.37
NPHP3-207ENST00000476742 PHTF2Q8N3S3 785 aa6.51□□□□□ -1.37
NPHP3-207ENST00000476742 MEIOBQ8N635 442 aa6.51□□□□□ -1.37
NPHP3-207ENST00000476742 ZNF784Q8NCA9 323 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-207ENST00000476742 SIRT1Q96EB6 747 aa6.51□□□□□ -1.37
NPHP3-207ENST00000476742 TMPRSS4Q9NRS4 437 aa6.51□□□□□ -1.37
NPHP3-207ENST00000476742 DOLKQ9UPQ8 538 aa6.51□□□□□ -1.37
NPHP3-207ENST00000476742 TTLL8A6PVC2 850 aa6.5□□□□□ -1.37
NPHP3-207ENST00000476742 SKIP12755 728 aa6.5□□□□□ -1.37
NPHP3-207ENST00000476742 CC2D2BQ6DHV5 1058 aa6.5□□□□□ -1.37
NPHP3-207ENST00000476742 PLPP7Q8NBV4 271 aa6.5□□□□□ -1.37
NPHP3-207ENST00000476742 NFATC2IPQ8NCF5 419 aa6.5□□□□□ -1.37
NPHP3-207ENST00000476742 ADAMTS19Q8TE59 1207 aa6.5□□□□□ -1.37
NPHP3-207ENST00000476742 CYLDQ9NQC7 956 aa6.5□□□□□ -1.37
NPHP3-207ENST00000476742 LZTS3O60299 673 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-207ENST00000476742 SNRPNP63162 240 aaKnown RBP6.49□□□□□ -1.37
NPHP3-207ENST00000476742 USP4Q13107 963 aa6.49□□□□□ -1.37
NPHP3-207ENST00000476742 CCDC85AQ96PX6 553 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-207ENST00000476742 TSEN34Q9BSV6 310 aaKnown RBP6.49□□□□□ -1.37
NPHP3-207ENST00000476742 MKL2Q9ULH7 1088 aa6.49□□□□□ -1.37
NPHP3-207ENST00000476742 ERVK-9P63128 1117 aa6.48□□□□□ -1.37
NPHP3-207ENST00000476742 CBLBQ13191 982 aa6.48□□□□□ -1.37
NPHP3-207ENST00000476742 OXLD1Q5BKU9 147 aa6.48□□□□□ -1.37
NPHP3-207ENST00000476742 Q6ZVU0 165 aa6.48□□□□□ -1.37
NPHP3-207ENST00000476742 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
NPHP3-207ENST00000476742 LILRA1O75019 489 aa6.47□□□□□ -1.37
NPHP3-207ENST00000476742 LRP8Q14114 963 aa6.47□□□□□ -1.37
NPHP3-207ENST00000476742 EML3Q32P44 896 aa6.47□□□□□ -1.37
NPHP3-207ENST00000476742 TSGA10IPQ3SY00 556 aa6.47□□□□□ -1.37
NPHP3-207ENST00000476742 MBIPQ9NS73 344 aa6.47□□□□□ -1.37
NPHP3-207ENST00000476742 CHIC2Q9UKJ5 165 aa6.47□□□□□ -1.37
NPHP3-207ENST00000476742 ATP5J2-PTCD1G3V325 749 aa6.46□□□□□ -1.38
NPHP3-207ENST00000476742 ATP9BO43861 1147 aa6.46□□□□□ -1.38
NPHP3-207ENST00000476742 ADH1AP07327 375 aa6.46□□□□□ -1.38
NPHP3-207ENST00000476742 ADD1P35611 737 aaKnown RBP6.46□□□□□ -1.38
NPHP3-207ENST00000476742 CYP2U1Q7Z449 544 aa6.46□□□□□ -1.38
NPHP3-207ENST00000476742 CDCA7Q9BWT1 371 aaPredicted RBP6.46□□□□□ -1.38
NPHP3-207ENST00000476742 IGF1RP08069 1367 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 USP17L5A8MUK1 530 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 SCTRP47872 440 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 RELBQ01201 579 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 ACDQ96AP0 544 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 TFIP11Q9UBB9 837 aaKnown RBP6.45□□□□□ -1.38
NPHP3-207ENST00000476742 TIMELESSQ9UNS1 1208 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 NOD1Q9Y239 953 aa6.45□□□□□ -1.38
NPHP3-207ENST00000476742 PTGIRP43119 386 aa6.44□□□□□ -1.38
NPHP3-207ENST00000476742 CHRNA4P43681 627 aa6.44□□□□□ -1.38
NPHP3-207ENST00000476742 NCOA4Q13772 614 aa6.44□□□□□ -1.38
NPHP3-207ENST00000476742 RSPO4Q2I0M5 234 aaPredicted RBP6.44□□□□□ -1.38
NPHP3-207ENST00000476742 PLEKHM2Q8IWE5 1019 aa6.44□□□□□ -1.38
NPHP3-207ENST00000476742 CCDC97Q96F63 343 aaPredicted RBP6.44□□□□□ -1.38
NPHP3-207ENST00000476742 AGBL1Q96MI9 1066 aa6.44□□□□□ -1.38
NPHP3-207ENST00000476742 PPP1R12CQ9BZL4 782 aa6.44□□□□□ -1.38
NPHP3-207ENST00000476742 OSBPL3Q9H4L5 887 aa6.44□□□□□ -1.38
NPHP3-207ENST00000476742 COL17A1Q9UMD9 1497 aaPredicted RBP6.44□□□□□ -1.38
NPHP3-207ENST00000476742 USP17L3A6NCW0 530 aa6.43□□□□□ -1.38
NPHP3-207ENST00000476742 USP17L4A6NCW7 530 aa6.43□□□□□ -1.38
NPHP3-207ENST00000476742 PALM3A6NDB9 673 aaPredicted RBP6.43□□□□□ -1.38
NPHP3-207ENST00000476742 ARID3CA6NKF2 412 aa6.43□□□□□ -1.38
NPHP3-207ENST00000476742 FIGNL2A6NMB9 653 aa6.43□□□□□ -1.38
NPHP3-207ENST00000476742 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
NPHP3-207ENST00000476742 USP17L1Q7RTZ2 530 aa6.43□□□□□ -1.38
NPHP3-207ENST00000476742 TRIM50Q86XT4 487 aa6.43□□□□□ -1.38
NPHP3-207ENST00000476742 SERPINA10Q9UK55 444 aa6.43□□□□□ -1.38
NPHP3-207ENST00000476742 SPINT1O43278 529 aa6.42□□□□□ -1.38
NPHP3-207ENST00000476742 GNRH1P01148 92 aa6.42□□□□□ -1.38
NPHP3-207ENST00000476742 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
NPHP3-207ENST00000476742 DEPDC4Q8N2C3 294 aa6.42□□□□□ -1.38
NPHP3-207ENST00000476742 ZNF395Q9H8N7 513 aaPredicted RBP6.42□□□□□ -1.38
NPHP3-207ENST00000476742 MAFBQ9Y5Q3 323 aaPredicted RBP6.42□□□□□ -1.38
NPHP3-207ENST00000476742 OIP5O43482 229 aa6.41□□□□□ -1.38
NPHP3-207ENST00000476742 LMOD1P29536 600 aaPredicted RBP6.41□□□□□ -1.38
NPHP3-207ENST00000476742 ATP1A2P50993 1020 aa6.41□□□□□ -1.38
NPHP3-207ENST00000476742 PSME1Q06323 249 aa6.41□□□□□ -1.38
NPHP3-207ENST00000476742 ESCO1Q5FWF5 840 aa6.41□□□□□ -1.38
NPHP3-207ENST00000476742 NLRP3Q96P20 1036 aa6.41□□□□□ -1.38
NPHP3-207ENST00000476742 POLMQ9NP87 494 aaPredicted RBP6.41□□□□□ -1.38
NPHP3-207ENST00000476742 A0A1W2PRU2 124 aa6.4□□□□□ -1.38
NPHP3-207ENST00000476742 MEN1O00255 615 aa6.4□□□□□ -1.38
NPHP3-207ENST00000476742 HYAL3O43820 417 aaPredicted RBP6.4□□□□□ -1.38
NPHP3-207ENST00000476742 GTF2IP78347 998 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms