RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 EPS8L1Q8TE68 723 aa6.96□□□□□ -1.3
LRCH3-214ENST00000473177 TBC1D2BQ9UPU7 963 aa6.96□□□□□ -1.3
LRCH3-214ENST00000473177 CDK12Q9NYV4 1490 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-214ENST00000473177 MSH6P52701 1360 aa6.95□□□□□ -1.3
LRCH3-214ENST00000473177 DHX29Q7Z478 1369 aaKnown RBP6.95□□□□□ -1.3
LRCH3-214ENST00000473177 CCNB3Q8WWL7 1395 aa6.95□□□□□ -1.3
LRCH3-214ENST00000473177 LRP6O75581 1613 aa6.95□□□□□ -1.3
LRCH3-214ENST00000473177 GPR37L1O60883 481 aa6.95□□□□□ -1.3
LRCH3-214ENST00000473177 TXNDC2Q86VQ3 553 aa6.95□□□□□ -1.3
LRCH3-214ENST00000473177 ARHGAP35Q9NRY4 1499 aa6.95□□□□□ -1.3
LRCH3-214ENST00000473177 GPATCH8Q9UKJ3 1502 aaKnown RBP6.95□□□□□ -1.3
LRCH3-214ENST00000473177 PHLPP1O60346 1717 aa6.94□□□□□ -1.3
LRCH3-214ENST00000473177 CDC42BPAQ5VT25 1732 aa6.94□□□□□ -1.3
LRCH3-214ENST00000473177 TRAK2O60296 914 aa6.94□□□□□ -1.3
LRCH3-214ENST00000473177 KCNH2Q12809 1159 aa6.94□□□□□ -1.3
LRCH3-214ENST00000473177 PNMA1Q8ND90 353 aa6.94□□□□□ -1.3
LRCH3-214ENST00000473177 MAP10Q9P2G4 905 aa6.94□□□□□ -1.3
LRCH3-214ENST00000473177 ZC3H13Q5T200 1668 aaKnown RBP6.93□□□□□ -1.3
LRCH3-214ENST00000473177 RTEL1-TNFRSF6BF6WH68 1400 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 FGD6Q6ZV73 1430 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 CTHP32929 405 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 GGCXP38435 758 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 Q6ZNB5 142 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 SLAIN2Q9P270 581 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 FCF1Q9Y324 198 aaKnown RBP6.93□□□□□ -1.3
LRCH3-214ENST00000473177 ATAD2Q6PL18 1390 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 RGS12O14924 1447 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 CEP162Q5TB80 1403 aa6.93□□□□□ -1.3
LRCH3-214ENST00000473177 MAP3K1Q13233 1512 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 KCNA6P17658 529 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 LTKP29376 864 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 ABL2P42684 1182 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 IRF5Q13568 498 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 LAPTM4AQ15012 233 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 WWC1Q8IX03 1113 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 FKBPLQ9UIM3 349 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 AFF2P51816 1311 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 ZC3H4Q9UPT8 1303 aaKnown RBP6.92□□□□□ -1.3
LRCH3-214ENST00000473177 ERVK-7P63135 1459 aa6.92□□□□□ -1.3
LRCH3-214ENST00000473177 RNF223E7ERA6 249 aa6.91□□□□□ -1.3
LRCH3-214ENST00000473177 CCDC24Q8N4L8 307 aa6.91□□□□□ -1.3
LRCH3-214ENST00000473177 ANKLE1Q8NAG6 615 aa6.91□□□□□ -1.3
LRCH3-214ENST00000473177 ARMC2Q8NEN0 867 aa6.91□□□□□ -1.3
LRCH3-214ENST00000473177 CASKIN1Q8WXD9 1431 aa6.91□□□□□ -1.3
LRCH3-214ENST00000473177 NKTRP30414 1462 aaKnown RBP6.91□□□□□ -1.3
LRCH3-214ENST00000473177 PRDM15P57071 1507 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-214ENST00000473177 SETBP1Q9Y6X0 1596 aa6.91□□□□□ -1.3
LRCH3-214ENST00000473177 RBM6P78332 1123 aaKnown RBP6.9□□□□□ -1.3
LRCH3-214ENST00000473177 WASHC4Q2M389 1173 aa6.9□□□□□ -1.3
LRCH3-214ENST00000473177 PTCRAQ6ISU1 281 aaPredicted RBP6.9□□□□□ -1.3
LRCH3-214ENST00000473177 PPP1R18Q6NYC8 613 aa6.9□□□□□ -1.3
LRCH3-214ENST00000473177 GPKOWQ92917 476 aaPredicted RBP eCLIP6.9□□□□□ -1.3
LRCH3-214ENST00000473177 SLC26A8Q96RN1 970 aa6.9□□□□□ -1.3
LRCH3-214ENST00000473177 UNC93B1Q9H1C4 597 aa6.9□□□□□ -1.3
LRCH3-214ENST00000473177 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.9□□□□□ -1.3
LRCH3-214ENST00000473177 NCOA2Q15596 1464 aa6.9□□□□□ -1.31
LRCH3-214ENST00000473177 ARHGAP23Q9P227 1491 aa6.9□□□□□ -1.31
LRCH3-214ENST00000473177 SLIT1O75093 1534 aa6.9□□□□□ -1.31
LRCH3-214ENST00000473177 TIAM1Q13009 1591 aa6.9□□□□□ -1.31
LRCH3-214ENST00000473177 COL16A1Q07092 1604 aaPredicted RBP6.9□□□□□ -1.31
LRCH3-214ENST00000473177 LRRIQ1Q96JM4 1722 aa6.9□□□□□ -1.31
LRCH3-214ENST00000473177 PPEF1O14829 653 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-214ENST00000473177 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
LRCH3-214ENST00000473177 C8orf37Q96NL8 207 aa6.89□□□□□ -1.31
LRCH3-214ENST00000473177 QTRT2Q9H974 415 aaKnown RBP6.89□□□□□ -1.31
LRCH3-214ENST00000473177 ZNF330Q9Y3S2 320 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-214ENST00000473177 ZNF644Q9H582 1327 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-214ENST00000473177 MTUS2Q5JR59 1369 aa6.89□□□□□ -1.31
LRCH3-214ENST00000473177 XIRP1Q702N8 1843 aaKnown RBP6.89□□□□□ -1.31
LRCH3-214ENST00000473177 ABCC3O15438 1527 aa6.88□□□□□ -1.31
LRCH3-214ENST00000473177 CCDC141Q6ZP82 1450 aa6.88□□□□□ -1.31
LRCH3-214ENST00000473177 FYCO1Q9BQS8 1478 aa6.88□□□□□ -1.31
LRCH3-214ENST00000473177 NBPF14Q5TI25 921 aa6.88□□□□□ -1.31
LRCH3-214ENST00000473177 GPSM3Q9Y4H4 160 aa6.88□□□□□ -1.31
LRCH3-214ENST00000473177 UBR1Q8IWV7 1749 aa6.87□□□□□ -1.31
LRCH3-214ENST00000473177 MBD5Q9P267 1494 aa6.87□□□□□ -1.31
LRCH3-214ENST00000473177 TMEM2Q9UHN6 1383 aa6.87□□□□□ -1.31
LRCH3-214ENST00000473177 PDXDC2PQ6P474 469 aa6.87□□□□□ -1.31
LRCH3-214ENST00000473177 TSPY4P0CV99 314 aa6.86□□□□□ -1.31
LRCH3-214ENST00000473177 TSPY10P0CW01 314 aa6.86□□□□□ -1.31
LRCH3-214ENST00000473177 ATF3P18847 181 aa6.86□□□□□ -1.31
LRCH3-214ENST00000473177 PLA2G2CQ5R387 149 aa6.86□□□□□ -1.31
LRCH3-214ENST00000473177 SHPRHQ149N8 1683 aa6.86□□□□□ -1.31
LRCH3-214ENST00000473177 ZBBXA8MT70 800 aa6.85□□□□□ -1.31
LRCH3-214ENST00000473177 ZBTB24O43167 697 aaPredicted RBP6.85□□□□□ -1.31
LRCH3-214ENST00000473177 FBXO45P0C2W1 286 aa6.85□□□□□ -1.31
LRCH3-214ENST00000473177 PTK2Q05397 1052 aa6.85□□□□□ -1.31
LRCH3-214ENST00000473177 VAC14Q08AM6 782 aa6.85□□□□□ -1.31
LRCH3-214ENST00000473177 NR1H3Q13133 447 aa6.85□□□□□ -1.31
LRCH3-214ENST00000473177 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
LRCH3-214ENST00000473177 AHDC1Q5TGY3 1603 aaPredicted RBP6.85□□□□□ -1.31
LRCH3-214ENST00000473177 NWD1Q149M9 1564 aa6.85□□□□□ -1.31
LRCH3-214ENST00000473177 POM121CA8CG34 1229 aa6.84□□□□□ -1.31
LRCH3-214ENST00000473177 SOX11P35716 441 aa6.84□□□□□ -1.31
LRCH3-214ENST00000473177 RPIAP49247 311 aa6.84□□□□□ -1.31
LRCH3-214ENST00000473177 TRIM32Q13049 653 aa6.84□□□□□ -1.31
LRCH3-214ENST00000473177 SH3BP5LQ7L8J4 393 aa6.84□□□□□ -1.31
LRCH3-214ENST00000473177 ZNF511Q8NB15 262 aa6.84□□□□□ -1.31
LRCH3-214ENST00000473177 BAP1Q92560 729 aa6.84□□□□□ -1.31
LRCH3-214ENST00000473177 PRKD2Q9BZL6 878 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms