RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 FAM184AQ8NB25 1140 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 KIAA1524Q8TCG1 905 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 CWC22Q9HCG8 908 aaKnown RBP5.08□□□□□ -1.6
VPS50-210ENST00000471188 SLC52A1Q9NWF4 448 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 MORC2Q9Y6X9 1032 aaPredicted RBP5.08□□□□□ -1.6
VPS50-210ENST00000471188 CAMSAP2Q08AD1 1489 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 ARAP3Q8WWN8 1544 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 TBC1D12O60347 775 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 PSEN2P49810 448 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 LMOD3Q0VAK6 560 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 CDCA8Q53HL2 280 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 EP400NLQ6ZTU2 488 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 CHD1LQ86WJ1 897 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 GTF3C6Q969F1 213 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 EFCC1Q9HA90 598 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 DDX19BQ9UMR2 479 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 MBD5Q9P267 1494 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 POLR3GO15318 223 aaPredicted RBP5.08□□□□□ -1.6
VPS50-210ENST00000471188 TPD52L1Q16890 204 aaPredicted RBP5.08□□□□□ -1.6
VPS50-210ENST00000471188 NUP155O75694 1391 aa5.08□□□□□ -1.6
VPS50-210ENST00000471188 LRRIQ1Q96JM4 1722 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 DPYSL4O14531 572 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 UVSSAQ2YD98 709 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 BMP2KLQ5H9B9 411 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 NEK11Q8NG66 645 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 KCNG1Q9UIX4 513 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 EHBP1L1Q8N3D4 1523 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 SMTNL1A8MU46 457 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 GYS2P54840 703 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 FAM193AP78312 1265 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 HDAC1Q13547 482 aaPredicted RBP5.07□□□□□ -1.6
VPS50-210ENST00000471188 TEX35Q5T0J7 233 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 ZNF687Q8N1G0 1237 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 BANK1Q8NDB2 785 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 ZNF397Q8NF99 534 aaPredicted RBP5.07□□□□□ -1.6
VPS50-210ENST00000471188 WDR70Q9NW82 654 aa5.07□□□□□ -1.6
VPS50-210ENST00000471188 GEMIN8Q9NWZ8 242 aaKnown RBP5.07□□□□□ -1.6
VPS50-210ENST00000471188 KDM4AO75164 1064 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 GADD45BO75293 160 aaPredicted RBP5.06□□□□□ -1.6
VPS50-210ENST00000471188 CDC45O75419 566 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 CYP2E1P05181 493 aaPredicted RBP5.06□□□□□ -1.6
VPS50-210ENST00000471188 PTGS1P23219 599 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 PTCD2Q8WV60 388 aaKnown RBP5.06□□□□□ -1.6
VPS50-210ENST00000471188 KCNK17Q96T54 332 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 EMILIN3Q9NT22 766 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 EPRSP07814 1512 aaKnown RBP5.06□□□□□ -1.6
VPS50-210ENST00000471188 CCDC144AA2RUR9 1427 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 DAPK1P53355 1430 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 TRIM66O15016 1216 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 HTATSF1O43719 755 aaKnown RBP5.06□□□□□ -1.6
VPS50-210ENST00000471188 DHX16O60231 1041 aaKnown RBP5.06□□□□□ -1.6
VPS50-210ENST00000471188 TPM3P06753 285 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 NUCB1Q02818 461 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 KMT5BQ4FZB7 885 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 KRBA2Q6ZNG9 492 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 TCP11L2Q8N4U5 519 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 GOLGA6L1Q8N7Z2 621 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 MYCBPQ99417 103 aaPredicted RBP5.06□□□□□ -1.6
VPS50-210ENST00000471188 KCNF1Q9H3M0 494 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 ZDHHC9Q9Y397 364 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 CFAP74Q9C0B2 1584 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 SLC34A2O95436 690 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 TRIM27P14373 513 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 ELF2Q15723 593 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 SYT10Q6XYQ8 523 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 DRC1Q96MC2 740 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 TESK2Q96S53 571 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 C1orf115Q9H7X2 142 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 YY1AP1Q9H869 796 aa5.06□□□□□ -1.6
VPS50-210ENST00000471188 PZPP20742 1482 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 UHRF1BP1Q6BDS2 1440 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 ERBINQ96RT1 1412 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 SMARCA5O60264 1052 aaPredicted RBP5.05□□□□□ -1.6
VPS50-210ENST00000471188 CYP2C19P33261 490 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 LRMPQ12912 555 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 AXDND1Q5T1B0 1012 aaPredicted RBP5.05□□□□□ -1.6
VPS50-210ENST00000471188 CCDC186Q7Z3E2 898 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 TMEM57Q8N5G2 664 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 CCDC191Q8NCU4 936 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 TSR2Q969E8 191 aaKnown RBP5.05□□□□□ -1.6
VPS50-210ENST00000471188 ZNF215Q9UL58 517 aaPredicted RBP5.05□□□□□ -1.6
VPS50-210ENST00000471188 E9PCH4 1651 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 FER1L4A9Z1Z3 1794 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 EVI5O60447 810 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 NEK4P51957 841 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 ICE2Q659A1 982 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 GIMAP6Q6P9H5 292 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 FBXO38Q6PIJ6 1188 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 OXER1Q8TDS5 423 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 DDX12PQ92771 950 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 PAXBP1Q9Y5B6 917 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 TTC37Q6PGP7 1564 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 TCOF1Q13428 1488 aaKnown RBP5.05□□□□□ -1.6
VPS50-210ENST00000471188 ROCK1Q13464 1354 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 TDRD9Q8NDG6 1382 aaKnown RBP5.05□□□□□ -1.6
VPS50-210ENST00000471188 MYO1CO00159 1063 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 APBB1O00213 710 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 GPS2Q13227 327 aa5.05□□□□□ -1.6
VPS50-210ENST00000471188 BMS1Q14692 1282 aaKnown RBP5.05□□□□□ -1.6
VPS50-210ENST00000471188 CCDC183Q5T5S1 534 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms