RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 OSBPP22059 807 aa10.18□□□□□ -0.78
SMC4-212ENST00000470240 LMOD3Q0VAK6 560 aa10.18□□□□□ -0.78
SMC4-212ENST00000470240 PROX2Q3B8N5 592 aa10.18□□□□□ -0.78
SMC4-212ENST00000470240 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
SMC4-212ENST00000470240 CABP1Q9NZU7 370 aa10.18□□□□□ -0.78
SMC4-212ENST00000470240 CPS1P31327 1500 aa10.17□□□□□ -0.78
SMC4-212ENST00000470240 NLRP1Q9C000 1473 aa10.17□□□□□ -0.78
SMC4-212ENST00000470240 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
SMC4-212ENST00000470240 KIF13AQ9H1H9 1805 aa10.17□□□□□ -0.78
SMC4-212ENST00000470240 GOLGA8CPA6NN73 597 aa10.17□□□□□ -0.78
SMC4-212ENST00000470240 MLLT3P42568 568 aaPredicted RBP10.17□□□□□ -0.78
SMC4-212ENST00000470240 MRPL50Q8N5N7 158 aaKnown RBP10.17□□□□□ -0.78
SMC4-212ENST00000470240 ZNF428Q96B54 188 aa10.17□□□□□ -0.78
SMC4-212ENST00000470240 SMC4Q9NTJ3 1288 aa10.17□□□□□ -0.78
SMC4-212ENST00000470240 USP35Q9P2H5 1018 aa10.17□□□□□ -0.78
SMC4-212ENST00000470240 TECPR2O15040 1411 aa10.16□□□□□ -0.78
SMC4-212ENST00000470240 WASLO00401 505 aaPredicted RBP10.16□□□□□ -0.78
SMC4-212ENST00000470240 RIPK4P57078 832 aa10.16□□□□□ -0.78
SMC4-212ENST00000470240 MVPQ14764 893 aaKnown RBP10.16□□□□□ -0.78
SMC4-212ENST00000470240 DZIP1LQ8IYY4 767 aaKnown RBP10.16□□□□□ -0.78
SMC4-212ENST00000470240 PANK1Q8TE04 598 aa10.16□□□□□ -0.78
SMC4-212ENST00000470240 COG3Q96JB2 828 aa10.16□□□□□ -0.78
SMC4-212ENST00000470240 CDK12Q9NYV4 1490 aaPredicted RBP10.16□□□□□ -0.78
SMC4-212ENST00000470240 MON2Q7Z3U7 1717 aa10.16□□□□□ -0.78
SMC4-212ENST00000470240 PNPLA6Q8IY17 1366 aa10.15□□□□□ -0.78
SMC4-212ENST00000470240 NRXN3Q9Y4C0 1643 aa10.15□□□□□ -0.78
SMC4-212ENST00000470240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.15□□□□□ -0.786e-65■■■■■ 143.5
SMC4-212ENST00000470240 PLEKHF1Q96S99 279 aa10.15□□□□□ -0.78
SMC4-212ENST00000470240 RABGEF1Q9UJ41 708 aa10.15□□□□□ -0.78
SMC4-212ENST00000470240 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.78
SMC4-212ENST00000470240 AATKQ6ZMQ8 1374 aa10.14□□□□□ -0.79
SMC4-212ENST00000470240 LRRC7Q96NW7 1537 aa10.14□□□□□ -0.79
SMC4-212ENST00000470240 SEMA3EO15041 775 aa10.14□□□□□ -0.79
SMC4-212ENST00000470240 PRIM1P49642 420 aaKnown RBP10.14□□□□□ -0.79
SMC4-212ENST00000470240 ALDH1L2Q3SY69 923 aa10.14□□□□□ -0.79
SMC4-212ENST00000470240 CERKQ8TCT0 537 aa10.14□□□□□ -0.79
SMC4-212ENST00000470240 AKAP12Q02952 1782 aa10.14□□□□□ -0.79
SMC4-212ENST00000470240 UBR1Q8IWV7 1749 aa10.13□□□□□ -0.79
SMC4-212ENST00000470240 MAP2P11137 1827 aaKnown RBP10.13□□□□□ -0.79
SMC4-212ENST00000470240 TRIM6-TRIM34B2RNG4 842 aa10.13□□□□□ -0.79
SMC4-212ENST00000470240 BECN1Q14457 450 aa10.13□□□□□ -0.79
SMC4-212ENST00000470240 C8orf34Q49A92 452 aa10.13□□□□□ -0.79
SMC4-212ENST00000470240 WAPLQ7Z5K2 1190 aa10.13□□□□□ -0.79
SMC4-212ENST00000470240 KCTD12Q96CX2 325 aaKnown RBP10.13□□□□□ -0.79
SMC4-212ENST00000470240 BCL2L13Q9BXK5 485 aa10.13□□□□□ -0.79
SMC4-212ENST00000470240 CPSF1Q10570 1443 aaKnown RBP10.13□□□□□ -0.79
SMC4-212ENST00000470240 TMEM2Q9UHN6 1383 aa10.13□□□□□ -0.79
SMC4-212ENST00000470240 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
SMC4-212ENST00000470240 PRKAR2BP31323 418 aa10.12□□□□□ -0.79
SMC4-212ENST00000470240 EXOSC9Q06265 439 aaKnown RBP10.12□□□□□ -0.79
SMC4-212ENST00000470240 NFE2L2Q16236 605 aa10.12□□□□□ -0.79
SMC4-212ENST00000470240 ATF7IPQ6VMQ6 1270 aa10.12□□□□□ -0.79
SMC4-212ENST00000470240 ITPRIPQ8IWB1 547 aa10.12□□□□□ -0.79
SMC4-212ENST00000470240 NUDT16Q96DE0 195 aaKnown RBP10.12□□□□□ -0.79
SMC4-212ENST00000470240 CDHR5Q9HBB8 845 aa10.12□□□□□ -0.79
SMC4-212ENST00000470240 KIAA1468Q9P260 1216 aa10.12□□□□□ -0.79
SMC4-212ENST00000470240 EID1Q9Y6B2 187 aa10.12□□□□□ -0.79
SMC4-212ENST00000470240 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
SMC4-212ENST00000470240 IGHDP01880 384 aa10.11□□□□□ -0.79
SMC4-212ENST00000470240 GNAI1P63096 354 aa10.11□□□□□ -0.79
SMC4-212ENST00000470240 TSR2Q969E8 191 aaKnown RBP10.11□□□□□ -0.79
SMC4-212ENST00000470240 METP08581 1390 aa10.11□□□□□ -0.79
SMC4-212ENST00000470240 PLEKHG1Q9ULL1 1385 aa10.11□□□□□ -0.79
SMC4-212ENST00000470240 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
SMC4-212ENST00000470240 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
SMC4-212ENST00000470240 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
SMC4-212ENST00000470240 POLKQ9UBT6 870 aa10.1□□□□□ -0.79
SMC4-212ENST00000470240 C3P01024 1663 aa10.09□□□□□ -0.79
SMC4-212ENST00000470240 EIF5BO60841 1220 aaKnown RBP10.09□□□□□ -0.79
SMC4-212ENST00000470240 DEKP35659 375 aaKnown RBP10.09□□□□□ -0.79
SMC4-212ENST00000470240 PRSS12P56730 875 aa10.09□□□□□ -0.79
SMC4-212ENST00000470240 HDAC1Q13547 482 aaPredicted RBP10.09□□□□□ -0.79
SMC4-212ENST00000470240 TXNDC2Q86VQ3 553 aa10.09□□□□□ -0.79
SMC4-212ENST00000470240 WNT2BQ93097 391 aa10.09□□□□□ -0.79
SMC4-212ENST00000470240 IFT57Q9NWB7 429 aa10.09□□□□□ -0.79
SMC4-212ENST00000470240 LAS1LQ9Y4W2 734 aaKnown RBP10.09□□□□□ -0.79
SMC4-212ENST00000470240 DIP2AQ14689 1571 aa10.09□□□□□ -0.79
SMC4-212ENST00000470240 RLBP1P12271 317 aa10.08□□□□□ -0.8
SMC4-212ENST00000470240 SKAP1Q86WV1 359 aa10.08□□□□□ -0.8
SMC4-212ENST00000470240 SSH1Q8WYL5 1049 aa10.08□□□□□ -0.8
SMC4-212ENST00000470240 HCSTQ9UBK5 93 aa10.08□□□□□ -0.8
SMC4-212ENST00000470240 NOB1Q9ULX3 412 aaKnown RBP10.08□□□□□ -0.8
SMC4-212ENST00000470240 PDZRN3Q9UPQ7 1066 aa10.08□□□□□ -0.8
SMC4-212ENST00000470240 NRKQ7Z2Y5 1582 aa10.08□□□□□ -0.8
SMC4-212ENST00000470240 TOPAZ1Q8N9V7 1692 aa10.08□□□□□ -0.8
SMC4-212ENST00000470240 NUTM2FA1L443 756 aa10.07□□□□□ -0.8
SMC4-212ENST00000470240 TRIM27P14373 513 aa10.07□□□□□ -0.8
SMC4-212ENST00000470240 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
SMC4-212ENST00000470240 NME9Q86XW9 330 aa10.07□□□□□ -0.8
SMC4-212ENST00000470240 ARHGAP45Q92619 1136 aa10.07□□□□□ -0.8
SMC4-212ENST00000470240 SEPT9Q9UHD8 586 aaPredicted RBP10.07□□□□□ -0.8
SMC4-212ENST00000470240 TSKSQ9UJT2 592 aa10.07□□□□□ -0.8
SMC4-212ENST00000470240 IL13P35225 146 aa10.06□□□□□ -0.8
SMC4-212ENST00000470240 BRPF1P55201 1214 aaPredicted RBP10.06□□□□□ -0.8
SMC4-212ENST00000470240 API5Q9BZZ5 524 aaKnown RBP10.06□□□□□ -0.8
SMC4-212ENST00000470240 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
SMC4-212ENST00000470240 TTC21BQ7Z4L5 1316 aa10.06□□□□□ -0.8
SMC4-212ENST00000470240 TTC21AQ8NDW8 1320 aa10.06□□□□□ -0.8
SMC4-212ENST00000470240 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
SMC4-212ENST00000470240 HMOX1P09601 288 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms