RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 HSP90AB1P08238 724 aaKnown RBP14.09□□□□□ -0.15
SSR3-205ENST00000467789 PHKG2P15735 406 aa14.09□□□□□ -0.15
SSR3-205ENST00000467789 AMOTQ4VCS5 1084 aa14.09□□□□□ -0.15
SSR3-205ENST00000467789 SGIP1Q9BQI5 828 aa14.09□□□□□ -0.15
SSR3-205ENST00000467789 C5P01031 1676 aa14.09□□□□□ -0.15
SSR3-205ENST00000467789 TAF1LQ8IZX4 1826 aa14.08□□□□□ -0.15
SSR3-205ENST00000467789 COL24A1Q17RW2 1714 aa14.08□□□□□ -0.16
SSR3-205ENST00000467789 PLEKHO1Q53GL0 409 aaPredicted RBP14.08□□□□□ -0.16
SSR3-205ENST00000467789 PNPLA7Q6ZV29 1317 aa14.08□□□□□ -0.16
SSR3-205ENST00000467789 TUBGCP6Q96RT7 1819 aa14.08□□□□□ -0.16
SSR3-205ENST00000467789 FLAD1Q8NFF5 587 aa14.07□□□□□ -0.16
SSR3-205ENST00000467789 PIGBQ92521 554 aa14.07□□□□□ -0.16
SSR3-205ENST00000467789 TMOD3Q9NYL9 352 aa14.07□□□□□ -0.16
SSR3-205ENST00000467789 KDRP35968 1356 aa14.07□□□□□ -0.16
SSR3-205ENST00000467789 DCAF5Q96JK2 942 aa14.06□□□□□ -0.16
SSR3-205ENST00000467789 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
SSR3-205ENST00000467789 MAP3K5Q99683 1374 aa14.06□□□□□ -0.16
SSR3-205ENST00000467789 ERVV-2B6SEH9 535 aa14.05□□□□□ -0.16
SSR3-205ENST00000467789 POLD1P28340 1107 aa14.05□□□□□ -0.16
SSR3-205ENST00000467789 KCNQ4P56696 695 aa14.05□□□□□ -0.16
SSR3-205ENST00000467789 ARXQ96QS3 562 aa14.05□□□□□ -0.16
SSR3-205ENST00000467789 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
SSR3-205ENST00000467789 IL13P35225 146 aa14.04□□□□□ -0.16
SSR3-205ENST00000467789 ZNF831Q5JPB2 1677 aa14.04□□□□□ -0.16
SSR3-205ENST00000467789 C4BP0C0L5 1744 aa14.04□□□□□ -0.16
SSR3-205ENST00000467789 MTHFSP49914 203 aa14.03□□□□□ -0.16
SSR3-205ENST00000467789 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
SSR3-205ENST00000467789 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
SSR3-205ENST00000467789 ZNF530Q6P9A1 599 aaPredicted RBP14.03□□□□□ -0.16
SSR3-205ENST00000467789 SYT17Q9BSW7 474 aa14.03□□□□□ -0.16
SSR3-205ENST00000467789 FHDC1Q9C0D6 1143 aaPredicted RBP14.03□□□□□ -0.16
SSR3-205ENST00000467789 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
SSR3-205ENST00000467789 SIK1P57059 783 aa14.02□□□□□ -0.17
SSR3-205ENST00000467789 CC2D1BQ5T0F9 858 aaKnown RBP14.01□□□□□ -0.17
SSR3-205ENST00000467789 AEBP1Q8IUX7 1158 aa14.01□□□□□ -0.17
SSR3-205ENST00000467789 AK7Q96M32 723 aa14.01□□□□□ -0.17
SSR3-205ENST00000467789 UBR3Q6ZT12 1888 aa14□□□□□ -0.17
SSR3-205ENST00000467789 DIAPH1O60610 1272 aaKnown RBP14□□□□□ -0.17
SSR3-205ENST00000467789 PRR29P0C7W0 189 aa14□□□□□ -0.17
SSR3-205ENST00000467789 COL23A1Q86Y22 540 aaPredicted RBP14□□□□□ -0.17
SSR3-205ENST00000467789 ASAP1Q9ULH1 1129 aa14□□□□□ -0.17
SSR3-205ENST00000467789 SSFA2P28290 1259 aa13.99□□□□□ -0.17
SSR3-205ENST00000467789 CABP4P57796 275 aa13.99□□□□□ -0.17
SSR3-205ENST00000467789 ATG3Q9NT62 314 aa13.99□□□□□ -0.17
SSR3-205ENST00000467789 SCN11AQ9UI33 1791 aa13.99□□□□□ -0.17
SSR3-205ENST00000467789 KDM6AO15550 1401 aaPredicted RBP13.98□□□□□ -0.17
SSR3-205ENST00000467789 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
SSR3-205ENST00000467789 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
SSR3-205ENST00000467789 COL3A1P02461 1466 aaPredicted RBP13.95□□□□□ -0.18
SSR3-205ENST00000467789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.95□□□□□ -0.18
SSR3-205ENST00000467789 RC3H1Q5TC82 1133 aaKnown RBP13.95□□□□□ -0.18
SSR3-205ENST00000467789 CHRDL2Q6WN34 429 aa13.95□□□□□ -0.18
SSR3-205ENST00000467789 LINC00116Q8NCU8 138 aa13.95□□□□□ -0.18
SSR3-205ENST00000467789 CFAP53Q96M91 514 aa13.95□□□□□ -0.18
SSR3-205ENST00000467789 COL5A3P25940 1745 aaPredicted RBP13.95□□□□□ -0.18
SSR3-205ENST00000467789 CICQ96RK0 1608 aaPredicted RBP13.94□□□□□ -0.18
SSR3-205ENST00000467789 HMOX1P09601 288 aa13.94□□□□□ -0.18
SSR3-205ENST00000467789 YY1P25490 414 aa13.94□□□□□ -0.18
SSR3-205ENST00000467789 ITPK1Q13572 414 aa13.94□□□□□ -0.18
SSR3-205ENST00000467789 NFATC2IPQ8NCF5 419 aa13.94□□□□□ -0.18
SSR3-205ENST00000467789 VIRMAQ69YN4 1812 aaKnown RBP13.94□□□□□ -0.18
SSR3-205ENST00000467789 MRC1P22897 1456 aa13.93□□□□□ -0.18
SSR3-205ENST00000467789 GNPATO15228 680 aa13.93□□□□□ -0.18
SSR3-205ENST00000467789 RTCBQ9Y3I0 505 aaKnown RBP13.93□□□□□ -0.18
SSR3-205ENST00000467789 ADAMTS7Q9UKP4 1686 aa13.93□□□□□ -0.18
SSR3-205ENST00000467789 CHD4Q14839 1912 aa13.93□□□□□ -0.18
SSR3-205ENST00000467789 CNTNAP4Q9C0A0 1308 aa13.92□□□□□ -0.18
SSR3-205ENST00000467789 PHF14O94880 888 aa13.92□□□□□ -0.18
SSR3-205ENST00000467789 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
SSR3-205ENST00000467789 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
SSR3-205ENST00000467789 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
SSR3-205ENST00000467789 MTHFSDQ2M296 383 aaKnown RBP13.91□□□□□ -0.18
SSR3-205ENST00000467789 MSL1Q68DK7 614 aa13.91□□□□□ -0.18
SSR3-205ENST00000467789 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
SSR3-205ENST00000467789 SLC4A9Q96Q91 983 aa13.91□□□□□ -0.18
SSR3-205ENST00000467789 NUDCQ9Y266 331 aa13.91□□□□□ -0.18
SSR3-205ENST00000467789 RNMTO43148 476 aaKnown RBP13.9□□□□□ -0.18
SSR3-205ENST00000467789 RPS6KA4O75676 772 aa13.9□□□□□ -0.18
SSR3-205ENST00000467789 VASPP50552 380 aaPredicted RBP13.9□□□□□ -0.18
SSR3-205ENST00000467789 GPR162Q16538 588 aa13.9□□□□□ -0.18
SSR3-205ENST00000467789 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
SSR3-205ENST00000467789 AMIGO3Q86WK7 504 aa13.9□□□□□ -0.18
SSR3-205ENST00000467789 GAS2L2Q8NHY3 880 aa13.9□□□□□ -0.18
SSR3-205ENST00000467789 PTCD1O75127 700 aaKnown RBP13.89□□□□□ -0.19
SSR3-205ENST00000467789 NLGN1Q8N2Q7 840 aa13.89□□□□□ -0.19
SSR3-205ENST00000467789 PPP2R1AP30153 589 aa13.88□□□□□ -0.19
SSR3-205ENST00000467789 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
SSR3-205ENST00000467789 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
SSR3-205ENST00000467789 MYH14Q7Z406 1995 aaKnown RBP13.88□□□□□ -0.19
SSR3-205ENST00000467789 UTRNP46939 3433 aa13.88□□□□□ -0.19
SSR3-205ENST00000467789 TJP1Q07157 1748 aa13.87□□□□□ -0.19
SSR3-205ENST00000467789 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
SSR3-205ENST00000467789 GRIN3BO60391 1043 aa13.87□□□□□ -0.19
SSR3-205ENST00000467789 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
SSR3-205ENST00000467789 NLGN2Q8NFZ4 835 aa13.87□□□□□ -0.19
SSR3-205ENST00000467789 RFC4P35249 363 aa13.86□□□□□ -0.19
SSR3-205ENST00000467789 CRKLP46109 303 aaKnown RBP13.86□□□□□ -0.19
SSR3-205ENST00000467789 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
SSR3-205ENST00000467789 UBR2Q8IWV8 1755 aa13.86□□□□□ -0.19
SSR3-205ENST00000467789 C4AP0C0L4 1744 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms