RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
SSR3-205ENST00000467789 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
SSR3-205ENST00000467789 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
SSR3-205ENST00000467789 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
SSR3-205ENST00000467789 ABCC9O60706 1549 aa22.6■■□□□ 1.21
SSR3-205ENST00000467789 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
SSR3-205ENST00000467789 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
SSR3-205ENST00000467789 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
SSR3-205ENST00000467789 NACADO15069 1562 aa21.63■■□□□ 1.05
SSR3-205ENST00000467789 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
SSR3-205ENST00000467789 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
SSR3-205ENST00000467789 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
SSR3-205ENST00000467789 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
SSR3-205ENST00000467789 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
SSR3-205ENST00000467789 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
SSR3-205ENST00000467789 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.95
SSR3-205ENST00000467789 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
SSR3-205ENST00000467789 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.94
SSR3-205ENST00000467789 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
SSR3-205ENST00000467789 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
SSR3-205ENST00000467789 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
SSR3-205ENST00000467789 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
SSR3-205ENST00000467789 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
SSR3-205ENST00000467789 FOXD1Q16676 465 aa20.23■□□□□ 0.83
SSR3-205ENST00000467789 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
SSR3-205ENST00000467789 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
SSR3-205ENST00000467789 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
SSR3-205ENST00000467789 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
SSR3-205ENST00000467789 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
SSR3-205ENST00000467789 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
SSR3-205ENST00000467789 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
SSR3-205ENST00000467789 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
SSR3-205ENST00000467789 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
SSR3-205ENST00000467789 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
SSR3-205ENST00000467789 CUX2O14529 1486 aa19.49■□□□□ 0.71
SSR3-205ENST00000467789 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
SSR3-205ENST00000467789 NESP48681 1621 aa19.47■□□□□ 0.71
SSR3-205ENST00000467789 WIZO95785 1651 aa19.46■□□□□ 0.71
SSR3-205ENST00000467789 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
SSR3-205ENST00000467789 ADRA2BP18089 450 aa19.41■□□□□ 0.7
SSR3-205ENST00000467789 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
SSR3-205ENST00000467789 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
SSR3-205ENST00000467789 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.69
SSR3-205ENST00000467789 THOC2Q8NI27 1593 aaKnown RBP19.28■□□□□ 0.68
SSR3-205ENST00000467789 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
SSR3-205ENST00000467789 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
SSR3-205ENST00000467789 DNAJC5Q9H3Z4 198 aa19.17■□□□□ 0.66
SSR3-205ENST00000467789 CFTRP13569 1480 aa19.16■□□□□ 0.66
SSR3-205ENST00000467789 PIAS4Q8N2W9 510 aaPredicted RBP19.14■□□□□ 0.65
SSR3-205ENST00000467789 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
SSR3-205ENST00000467789 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
SSR3-205ENST00000467789 WDR62O43379 1518 aa19.1■□□□□ 0.65
SSR3-205ENST00000467789 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
SSR3-205ENST00000467789 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
SSR3-205ENST00000467789 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
SSR3-205ENST00000467789 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
SSR3-205ENST00000467789 MSH5O43196 834 aa18.83■□□□□ 0.6
SSR3-205ENST00000467789 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
SSR3-205ENST00000467789 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
SSR3-205ENST00000467789 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
SSR3-205ENST00000467789 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
SSR3-205ENST00000467789 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
SSR3-205ENST00000467789 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
SSR3-205ENST00000467789 ZNF608Q9ULD9 1512 aaPredicted RBP18.6■□□□□ 0.57
SSR3-205ENST00000467789 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
SSR3-205ENST00000467789 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.56
SSR3-205ENST00000467789 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
SSR3-205ENST00000467789 WDR97A6NE52 1622 aa18.51■□□□□ 0.55
SSR3-205ENST00000467789 SOGA1O94964 1423 aa18.5■□□□□ 0.55
SSR3-205ENST00000467789 CUX1P39880 1505 aa18.49■□□□□ 0.55
SSR3-205ENST00000467789 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
SSR3-205ENST00000467789 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.552e-6■■■■■ 30.2
SSR3-205ENST00000467789 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
SSR3-205ENST00000467789 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
SSR3-205ENST00000467789 CHD1O14646 1710 aa18.38■□□□□ 0.53
SSR3-205ENST00000467789 GRIN2BQ13224 1484 aa18.34■□□□□ 0.53
SSR3-205ENST00000467789 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
SSR3-205ENST00000467789 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
SSR3-205ENST00000467789 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.52
SSR3-205ENST00000467789 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
SSR3-205ENST00000467789 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
SSR3-205ENST00000467789 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
SSR3-205ENST00000467789 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
SSR3-205ENST00000467789 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
SSR3-205ENST00000467789 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
SSR3-205ENST00000467789 WRNQ14191 1432 aaPredicted RBP eCLIP18.31■□□□□ 0.52
SSR3-205ENST00000467789 FBLN2P98095 1184 aa18.3■□□□□ 0.52
SSR3-205ENST00000467789 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
SSR3-205ENST00000467789 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
SSR3-205ENST00000467789 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
SSR3-205ENST00000467789 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
SSR3-205ENST00000467789 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
SSR3-205ENST00000467789 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
SSR3-205ENST00000467789 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
SSR3-205ENST00000467789 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
SSR3-205ENST00000467789 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
SSR3-205ENST00000467789 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
SSR3-205ENST00000467789 ARAP1Q96P48 1450 aa18.1■□□□□ 0.49
SSR3-205ENST00000467789 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
SSR3-205ENST00000467789 GRIN2AQ12879 1464 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms