RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
EDEM3-204ENST00000466392 UBR3Q6ZT12 1888 aa15.8■□□□□ 0.12
EDEM3-204ENST00000466392 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
EDEM3-204ENST00000466392 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
EDEM3-204ENST00000466392 SIK1P57059 783 aa15.8■□□□□ 0.12
EDEM3-204ENST00000466392 RALBP1Q15311 655 aa15.8■□□□□ 0.12
EDEM3-204ENST00000466392 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
EDEM3-204ENST00000466392 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
EDEM3-204ENST00000466392 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
EDEM3-204ENST00000466392 TJP1Q07157 1748 aa15.8■□□□□ 0.12
EDEM3-204ENST00000466392 MRC1P22897 1456 aa15.79■□□□□ 0.12
EDEM3-204ENST00000466392 RNMTO43148 476 aaKnown RBP15.79■□□□□ 0.12
EDEM3-204ENST00000466392 ITPK1Q13572 414 aa15.79■□□□□ 0.12
EDEM3-204ENST00000466392 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
EDEM3-204ENST00000466392 LINC00116Q8NCU8 138 aa15.79■□□□□ 0.12
EDEM3-204ENST00000466392 SLC4A9Q96Q91 983 aa15.79■□□□□ 0.12
EDEM3-204ENST00000466392 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
EDEM3-204ENST00000466392 MAP3K5Q99683 1374 aa15.78■□□□□ 0.12
EDEM3-204ENST00000466392 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
EDEM3-204ENST00000466392 ATP6V1AP38606 617 aa15.78■□□□□ 0.12
EDEM3-204ENST00000466392 ZNF831Q5JPB2 1677 aa15.77■□□□□ 0.12
EDEM3-204ENST00000466392 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.12
EDEM3-204ENST00000466392 PTCD1O75127 700 aaKnown RBP15.77■□□□□ 0.12
EDEM3-204ENST00000466392 SLC52A2Q9HAB3 445 aa15.77■□□□□ 0.12
EDEM3-204ENST00000466392 SPON1Q9HCB6 807 aa15.77■□□□□ 0.12
EDEM3-204ENST00000466392 SLC39A6Q13433 755 aa15.76■□□□□ 0.11
EDEM3-204ENST00000466392 GAS2L2Q8NHY3 880 aa15.76■□□□□ 0.11
EDEM3-204ENST00000466392 UBR2Q8IWV8 1755 aa15.76■□□□□ 0.11
EDEM3-204ENST00000466392 GNAT3A8MTJ3 354 aa15.75■□□□□ 0.11
EDEM3-204ENST00000466392 MSH5O43196 834 aa15.75■□□□□ 0.11
EDEM3-204ENST00000466392 FCHSD2O94868 740 aa15.75■□□□□ 0.11
EDEM3-204ENST00000466392 PHF14O94880 888 aa15.75■□□□□ 0.11
EDEM3-204ENST00000466392 COL23A1Q86Y22 540 aaPredicted RBP15.75■□□□□ 0.11
EDEM3-204ENST00000466392 IL17REQ8NFR9 667 aa15.75■□□□□ 0.11
EDEM3-204ENST00000466392 PRKRIP1Q9H875 184 aaPredicted RBP15.75■□□□□ 0.11
EDEM3-204ENST00000466392 MYH14Q7Z406 1995 aaKnown RBP15.75■□□□□ 0.11
EDEM3-204ENST00000466392 COL24A1Q17RW2 1714 aa15.74■□□□□ 0.11
EDEM3-204ENST00000466392 KCPQ6ZWJ8 1503 aa15.74■□□□□ 0.11
EDEM3-204ENST00000466392 PTGER2P43116 358 aa15.74■□□□□ 0.11
EDEM3-204ENST00000466392 AK7Q96M32 723 aa15.74■□□□□ 0.11
EDEM3-204ENST00000466392 CICQ96RK0 1608 aaPredicted RBP15.73■□□□□ 0.11
EDEM3-204ENST00000466392 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
EDEM3-204ENST00000466392 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
EDEM3-204ENST00000466392 PPP1R1BQ9UD71 204 aaPredicted RBP15.73■□□□□ 0.11
EDEM3-204ENST00000466392 MCM10Q7L590 875 aa15.72■□□□□ 0.11
EDEM3-204ENST00000466392 PLEKHF1Q96S99 279 aa15.72■□□□□ 0.11
EDEM3-204ENST00000466392 C4AP0C0L4 1744 aa15.71■□□□□ 0.11
EDEM3-204ENST00000466392 GNPATO15228 680 aa15.71■□□□□ 0.11
EDEM3-204ENST00000466392 MSL1Q68DK7 614 aa15.71■□□□□ 0.11
EDEM3-204ENST00000466392 SGIP1Q9BQI5 828 aa15.71■□□□□ 0.11
EDEM3-204ENST00000466392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.7■□□□□ 0.1
EDEM3-204ENST00000466392 TEFQ10587 303 aa15.7■□□□□ 0.1
EDEM3-204ENST00000466392 CEMIPQ8WUJ3 1361 aa15.7■□□□□ 0.1
EDEM3-204ENST00000466392 KCNQ3O43525 872 aa15.68■□□□□ 0.1
EDEM3-204ENST00000466392 DNAJC10Q8IXB1 793 aa15.68■□□□□ 0.1
EDEM3-204ENST00000466392 CCDC146Q8IYE0 955 aa15.68■□□□□ 0.1
EDEM3-204ENST00000466392 CCDC184Q52MB2 194 aa15.67■□□□□ 0.1
EDEM3-204ENST00000466392 RTF1Q92541 710 aaKnown RBP15.67■□□□□ 0.1
EDEM3-204ENST00000466392 MAPK8IP3Q9UPT6 1336 aa15.67■□□□□ 0.1
EDEM3-204ENST00000466392 NEFMP07197 916 aa15.66■□□□□ 0.1
EDEM3-204ENST00000466392 CRKLP46109 303 aaKnown RBP15.66■□□□□ 0.1
EDEM3-204ENST00000466392 SLC16A10Q8TF71 515 aa15.66■□□□□ 0.1
EDEM3-204ENST00000466392 THUMPD2Q9BTF0 503 aaKnown RBP15.66■□□□□ 0.1
EDEM3-204ENST00000466392 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
EDEM3-204ENST00000466392 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
EDEM3-204ENST00000466392 BTBD11A6QL63 1104 aa15.65■□□□□ 0.1
EDEM3-204ENST00000466392 SSFA2P28290 1259 aa15.65■□□□□ 0.1
EDEM3-204ENST00000466392 NFE2L2Q16236 605 aa15.65■□□□□ 0.1
EDEM3-204ENST00000466392 ZNF790Q6PG37 636 aa15.65■□□□□ 0.1
EDEM3-204ENST00000466392 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
EDEM3-204ENST00000466392 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
EDEM3-204ENST00000466392 ZNF496Q96IT1 587 aaPredicted RBP15.65■□□□□ 0.1
EDEM3-204ENST00000466392 ARXQ96QS3 562 aa15.65■□□□□ 0.1
EDEM3-204ENST00000466392 FHDC1Q9C0D6 1143 aaPredicted RBP15.65■□□□□ 0.1
EDEM3-204ENST00000466392 WDR43Q15061 677 aaKnown RBP eCLIP15.64■□□□□ 0.09
EDEM3-204ENST00000466392 FLAD1Q8NFF5 587 aa15.64■□□□□ 0.09
EDEM3-204ENST00000466392 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
EDEM3-204ENST00000466392 ADAMTS8Q9UP79 889 aa15.64■□□□□ 0.09
EDEM3-204ENST00000466392 RRP7AQ9Y3A4 280 aaKnown RBP15.64■□□□□ 0.09
EDEM3-204ENST00000466392 RTCBQ9Y3I0 505 aaKnown RBP15.64■□□□□ 0.09
EDEM3-204ENST00000466392 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
EDEM3-204ENST00000466392 INTS5Q6P9B9 1019 aaKnown RBP15.63■□□□□ 0.09
EDEM3-204ENST00000466392 HEG1Q9ULI3 1381 aa15.62■□□□□ 0.09
EDEM3-204ENST00000466392 PRAMEF22A3QJZ6 481 aa15.62■□□□□ 0.09
EDEM3-204ENST00000466392 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
EDEM3-204ENST00000466392 CYP19A1P11511 503 aaPredicted RBP15.62■□□□□ 0.09
EDEM3-204ENST00000466392 HMGB2P26583 209 aaKnown RBP15.62■□□□□ 0.09
EDEM3-204ENST00000466392 POLD1P28340 1107 aa15.62■□□□□ 0.09
EDEM3-204ENST00000466392 TRAPPC3LQ5T215 181 aa15.62■□□□□ 0.09
EDEM3-204ENST00000466392 ARHGEF1Q92888 912 aaKnown RBP15.62■□□□□ 0.09
EDEM3-204ENST00000466392 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
EDEM3-204ENST00000466392 NEUROD2Q15784 382 aa15.61■□□□□ 0.09
EDEM3-204ENST00000466392 SYT17Q9BSW7 474 aa15.61■□□□□ 0.09
EDEM3-204ENST00000466392 PNNQ9H307 717 aaKnown RBP15.61■□□□□ 0.09
EDEM3-204ENST00000466392 CCDC87Q9NVE4 849 aa15.61■□□□□ 0.09
EDEM3-204ENST00000466392 SRP68Q9UHB9 627 aaKnown RBP15.61■□□□□ 0.09
EDEM3-204ENST00000466392 ZBTB1Q9Y2K1 713 aa15.61■□□□□ 0.09
EDEM3-204ENST00000466392 TMPOP42166 694 aaKnown RBP15.6■□□□□ 0.09
EDEM3-204ENST00000466392 RIPK4P57078 832 aa15.6■□□□□ 0.09
EDEM3-204ENST00000466392 LAMB4A4D0S4 1761 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms