RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 ATRNO75882 1429 aa10.41□□□□□ -0.74
COMMD3-204ENST00000456711 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.41□□□□□ -0.74
COMMD3-204ENST00000456711 CFAP65Q6ZU64 1925 aaKnown RBP10.41□□□□□ -0.74
COMMD3-204ENST00000456711 SF3B2Q13435 895 aaKnown RBP10.41□□□□□ -0.74
COMMD3-204ENST00000456711 LRRC59Q96AG4 307 aaKnown RBP10.41□□□□□ -0.74
COMMD3-204ENST00000456711 MROH1Q8NDA8 1641 aa10.4□□□□□ -0.74
COMMD3-204ENST00000456711 CHD2O14647 1828 aaKnown RBP10.4□□□□□ -0.74
COMMD3-204ENST00000456711 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
COMMD3-204ENST00000456711 ATF3P18847 181 aa10.4□□□□□ -0.74
COMMD3-204ENST00000456711 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.74
COMMD3-204ENST00000456711 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.74
COMMD3-204ENST00000456711 PNPLA6Q8IY17 1366 aa10.39□□□□□ -0.75
COMMD3-204ENST00000456711 MBD5Q9P267 1494 aa10.39□□□□□ -0.75
COMMD3-204ENST00000456711 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
COMMD3-204ENST00000456711 VSIG8P0DPA2 414 aa10.39□□□□□ -0.75
COMMD3-204ENST00000456711 C14orf37Q86TY3 774 aa10.39□□□□□ -0.75
COMMD3-204ENST00000456711 C19orf44Q9H6X5 657 aa10.39□□□□□ -0.75
COMMD3-204ENST00000456711 PIK3C2BO00750 1634 aa10.39□□□□□ -0.75
COMMD3-204ENST00000456711 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
COMMD3-204ENST00000456711 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
COMMD3-204ENST00000456711 FNBP4Q8N3X1 1017 aaPredicted RBP10.38□□□□□ -0.75
COMMD3-204ENST00000456711 TMEM151AQ8N4L1 468 aa10.38□□□□□ -0.75
COMMD3-204ENST00000456711 CFAP44Q96MT7 982 aa10.38□□□□□ -0.75
COMMD3-204ENST00000456711 PHOX2BQ99453 314 aa10.38□□□□□ -0.75
COMMD3-204ENST00000456711 UNC13BO14795 1591 aa10.38□□□□□ -0.75
COMMD3-204ENST00000456711 ASXL1Q8IXJ9 1541 aa10.38□□□□□ -0.75
COMMD3-204ENST00000456711 ZNF784Q8NCA9 323 aaPredicted RBP10.37□□□□□ -0.75
COMMD3-204ENST00000456711 USB1Q9BQ65 265 aaKnown RBP10.37□□□□□ -0.75
COMMD3-204ENST00000456711 GDF11O95390 407 aa10.36□□□□□ -0.75
COMMD3-204ENST00000456711 RASSF7Q02833 373 aa10.36□□□□□ -0.75
COMMD3-204ENST00000456711 HIC1Q14526 733 aa10.36□□□□□ -0.75
COMMD3-204ENST00000456711 Q3C1V9 767 aa10.36□□□□□ -0.75
COMMD3-204ENST00000456711 PAXIP1Q6ZW49 1069 aaPredicted RBP10.36□□□□□ -0.75
COMMD3-204ENST00000456711 EFCAB6Q5THR3 1501 aa10.36□□□□□ -0.75
COMMD3-204ENST00000456711 WASF2Q9Y6W5 498 aa10.35□□□□□ -0.75
COMMD3-204ENST00000456711 CCNB3Q8WWL7 1395 aa10.35□□□□□ -0.75
COMMD3-204ENST00000456711 CEP152O94986 1710 aa10.35□□□□□ -0.75
COMMD3-204ENST00000456711 SPHKAPQ2M3C7 1700 aa10.35□□□□□ -0.75
COMMD3-204ENST00000456711 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
COMMD3-204ENST00000456711 SULF1Q8IWU6 871 aa10.34□□□□□ -0.75
COMMD3-204ENST00000456711 R3HDM1Q15032 1099 aaKnown RBP10.33□□□□□ -0.76
COMMD3-204ENST00000456711 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
COMMD3-204ENST00000456711 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
COMMD3-204ENST00000456711 HLA-CQ95604 372 aa10.33□□□□□ -0.76
COMMD3-204ENST00000456711 BCANQ96GW7 911 aa10.33□□□□□ -0.76
COMMD3-204ENST00000456711 GJD4Q96KN9 370 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-204ENST00000456711 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-204ENST00000456711 PTCH1Q13635 1447 aa10.33□□□□□ -0.76
COMMD3-204ENST00000456711 BAG6P46379 1132 aa10.32□□□□□ -0.76
COMMD3-204ENST00000456711 PTCRAQ6ISU1 281 aaPredicted RBP10.32□□□□□ -0.76
COMMD3-204ENST00000456711 BRWD3Q6RI45 1802 aa10.32□□□□□ -0.76
COMMD3-204ENST00000456711 ARHGAP31Q2M1Z3 1444 aa10.31□□□□□ -0.76
COMMD3-204ENST00000456711 CASKIN1Q8WXD9 1431 aa10.31□□□□□ -0.76
COMMD3-204ENST00000456711 DDX17Q92841 729 aaKnown RBP10.3□□□□□ -0.76
COMMD3-204ENST00000456711 PURBQ96QR8 312 aaKnown RBP10.3□□□□□ -0.76
COMMD3-204ENST00000456711 DCCP43146 1447 aa10.3□□□□□ -0.76
COMMD3-204ENST00000456711 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
COMMD3-204ENST00000456711 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
COMMD3-204ENST00000456711 GLI3P10071 1580 aa10.28□□□□□ -0.76
COMMD3-204ENST00000456711 MST1RQ04912 1400 aa10.28□□□□□ -0.76
COMMD3-204ENST00000456711 EEA1Q15075 1411 aa10.28□□□□□ -0.76
COMMD3-204ENST00000456711 SEMA3EO15041 775 aa10.28□□□□□ -0.76
COMMD3-204ENST00000456711 IDI1Q13907 227 aa10.28□□□□□ -0.76
COMMD3-204ENST00000456711 MRPL14Q6P1L8 145 aaKnown RBP10.28□□□□□ -0.76
COMMD3-204ENST00000456711 GNPATO15228 680 aa10.27□□□□□ -0.77
COMMD3-204ENST00000456711 PPP1R15AO75807 674 aaPredicted RBP10.27□□□□□ -0.77
COMMD3-204ENST00000456711 XP32Q5T750 250 aa10.27□□□□□ -0.77
COMMD3-204ENST00000456711 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.27□□□□□ -0.77
COMMD3-204ENST00000456711 PLEKHG1Q9ULL1 1385 aa10.26□□□□□ -0.77
COMMD3-204ENST00000456711 RBM26Q5T8P6 1007 aaKnown RBP10.26□□□□□ -0.77
COMMD3-204ENST00000456711 TBX22Q9Y458 520 aa10.26□□□□□ -0.77
COMMD3-204ENST00000456711 TLL2Q9Y6L7 1015 aa10.26□□□□□ -0.77
COMMD3-204ENST00000456711 CEP350Q5VT06 3117 aa10.26□□□□□ -0.77
COMMD3-204ENST00000456711 NINLQ9Y2I6 1382 aa10.26□□□□□ -0.77
COMMD3-204ENST00000456711 CAMTA1Q9Y6Y1 1673 aa10.25□□□□□ -0.77
COMMD3-204ENST00000456711 RALGAPBQ86X10 1494 aa10.25□□□□□ -0.77
COMMD3-204ENST00000456711 MARF1Q9Y4F3 1742 aaKnown RBP10.25□□□□□ -0.77
COMMD3-204ENST00000456711 ADGRB3O60242 1522 aa10.25□□□□□ -0.77
COMMD3-204ENST00000456711 GPR37O15354 613 aa10.25□□□□□ -0.77
COMMD3-204ENST00000456711 SH3BP2P78314 561 aa10.25□□□□□ -0.77
COMMD3-204ENST00000456711 ADAMTS8Q9UP79 889 aa10.25□□□□□ -0.77
COMMD3-204ENST00000456711 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
COMMD3-204ENST00000456711 KRT76Q01546 638 aa10.24□□□□□ -0.77
COMMD3-204ENST00000456711 LAMC1P11047 1609 aa10.24□□□□□ -0.77
COMMD3-204ENST00000456711 JUNDP17535 347 aa10.23□□□□□ -0.77
COMMD3-204ENST00000456711 GPAT2Q6NUI2 795 aa10.23□□□□□ -0.77
COMMD3-204ENST00000456711 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
COMMD3-204ENST00000456711 MTUS2Q5JR59 1369 aa10.23□□□□□ -0.77
COMMD3-204ENST00000456711 PIK3R4Q99570 1358 aa10.23□□□□□ -0.77
COMMD3-204ENST00000456711 PPFIA3O75145 1194 aa10.22□□□□□ -0.77
COMMD3-204ENST00000456711 CD46P15529 392 aa10.22□□□□□ -0.77
COMMD3-204ENST00000456711 SCARF1Q14162 830 aa10.22□□□□□ -0.77
COMMD3-204ENST00000456711 KRT27Q7Z3Y8 459 aa10.22□□□□□ -0.77
COMMD3-204ENST00000456711 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
COMMD3-204ENST00000456711 PPP1R1BQ9UD71 204 aaPredicted RBP10.22□□□□□ -0.77
COMMD3-204ENST00000456711 ZFYVE9O95405 1425 aa10.22□□□□□ -0.77
COMMD3-204ENST00000456711 FYCO1Q9BQS8 1478 aa10.22□□□□□ -0.77
COMMD3-204ENST00000456711 RGPD1P0DJD0 1748 aa10.21□□□□□ -0.77
COMMD3-204ENST00000456711 KDM4AO75164 1064 aa10.21□□□□□ -0.77
COMMD3-204ENST00000456711 TSPY4P0CV99 314 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms