RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SPTLC3Q9NUV7 552 aa16.56■□□□□ 0.24
PTPRE-204ENST00000455661 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
PTPRE-204ENST00000455661 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
PTPRE-204ENST00000455661 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
PTPRE-204ENST00000455661 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
PTPRE-204ENST00000455661 FKBP5Q13451 457 aaPredicted RBP16.55■□□□□ 0.24
PTPRE-204ENST00000455661 KRT24Q2M2I5 525 aa16.55■□□□□ 0.24
PTPRE-204ENST00000455661 ZNF710Q8N1W2 664 aa16.55■□□□□ 0.24
PTPRE-204ENST00000455661 CHL1O00533 1208 aa16.54■□□□□ 0.24
PTPRE-204ENST00000455661 CHAF1AQ13111 956 aaPredicted RBP16.54■□□□□ 0.24
PTPRE-204ENST00000455661 RILPL2Q969X0 211 aa16.54■□□□□ 0.24
PTPRE-204ENST00000455661 TPM3P06753 285 aa16.54■□□□□ 0.24
PTPRE-204ENST00000455661 ZSCAN20P17040 1043 aaPredicted RBP16.54■□□□□ 0.24
PTPRE-204ENST00000455661 CHMLP26374 656 aa16.54■□□□□ 0.24
PTPRE-204ENST00000455661 CCT4P50991 539 aaKnown RBP16.54■□□□□ 0.24
PTPRE-204ENST00000455661 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
PTPRE-204ENST00000455661 GTPBP4Q9BZE4 634 aaKnown RBP16.54■□□□□ 0.24
PTPRE-204ENST00000455661 LRRCC1Q9C099 1032 aa16.54■□□□□ 0.24
PTPRE-204ENST00000455661 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
PTPRE-204ENST00000455661 KDM4AO75164 1064 aa16.53■□□□□ 0.24
PTPRE-204ENST00000455661 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
PTPRE-204ENST00000455661 IL17RAQ96F46 866 aa16.53■□□□□ 0.24
PTPRE-204ENST00000455661 COG3Q96JB2 828 aa16.53■□□□□ 0.24
PTPRE-204ENST00000455661 DIAPH3Q9NSV4 1193 aa16.53■□□□□ 0.24
PTPRE-204ENST00000455661 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
PTPRE-204ENST00000455661 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
PTPRE-204ENST00000455661 PPP4R3BQ5MIZ7 849 aa16.53■□□□□ 0.24
PTPRE-204ENST00000455661 TSC1Q92574 1164 aa16.53■□□□□ 0.24
PTPRE-204ENST00000455661 GNAI2P04899 355 aa16.52■□□□□ 0.24
PTPRE-204ENST00000455661 UBE2HP62256 183 aa16.52■□□□□ 0.24
PTPRE-204ENST00000455661 CBX1P83916 185 aa16.52■□□□□ 0.24
PTPRE-204ENST00000455661 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.24
PTPRE-204ENST00000455661 NME9Q86XW9 330 aa16.52■□□□□ 0.24
PTPRE-204ENST00000455661 JARID2Q92833 1246 aaPredicted RBP16.52■□□□□ 0.24
PTPRE-204ENST00000455661 UPF3BQ9BZI7 483 aaKnown RBP16.52■□□□□ 0.24
PTPRE-204ENST00000455661 SRCIN1Q9C0H9 1055 aa16.52■□□□□ 0.24
PTPRE-204ENST00000455661 EPB41L2O43491 1005 aaKnown RBP16.52■□□□□ 0.23
PTPRE-204ENST00000455661 EXOC6BQ9Y2D4 811 aa16.52■□□□□ 0.23
PTPRE-204ENST00000455661 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
PTPRE-204ENST00000455661 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
PTPRE-204ENST00000455661 C17orf53Q8N3J3 647 aaPredicted RBP16.51■□□□□ 0.23
PTPRE-204ENST00000455661 ATP6V1DQ9Y5K8 247 aa16.51■□□□□ 0.23
PTPRE-204ENST00000455661 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
PTPRE-204ENST00000455661 RRS1Q15050 365 aaKnown RBP16.5■□□□□ 0.23
PTPRE-204ENST00000455661 BCL2L12Q9HB09 334 aa16.5■□□□□ 0.23
PTPRE-204ENST00000455661 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
PTPRE-204ENST00000455661 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
PTPRE-204ENST00000455661 MYO5BQ9ULV0 1848 aa16.5■□□□□ 0.23
PTPRE-204ENST00000455661 ALKQ9UM73 1620 aa16.5■□□□□ 0.23
PTPRE-204ENST00000455661 RPAP1Q9BWH6 1393 aaPredicted RBP16.5■□□□□ 0.23
PTPRE-204ENST00000455661 GOLGA6L6A8MZA4 724 aa16.5■□□□□ 0.23
PTPRE-204ENST00000455661 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
PTPRE-204ENST00000455661 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
PTPRE-204ENST00000455661 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
PTPRE-204ENST00000455661 TMEM131LA2VDJ0 1609 aa16.49■□□□□ 0.23
PTPRE-204ENST00000455661 MCM10Q7L590 875 aa16.48■□□□□ 0.23
PTPRE-204ENST00000455661 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
PTPRE-204ENST00000455661 KIF20AO95235 890 aa16.48■□□□□ 0.23
PTPRE-204ENST00000455661 TPRNQ4KMQ1 711 aa16.48■□□□□ 0.23
PTPRE-204ENST00000455661 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
PTPRE-204ENST00000455661 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
PTPRE-204ENST00000455661 HSPA4P34932 840 aa16.47■□□□□ 0.23
PTPRE-204ENST00000455661 SULT6B1Q6IMI4 303 aa16.47■□□□□ 0.23
PTPRE-204ENST00000455661 KIAA1524Q8TCG1 905 aa16.47■□□□□ 0.23
PTPRE-204ENST00000455661 STX6O43752 255 aa16.47■□□□□ 0.23
PTPRE-204ENST00000455661 GNAI3P08754 354 aa16.47■□□□□ 0.23
PTPRE-204ENST00000455661 WAPLQ7Z5K2 1190 aa16.47■□□□□ 0.23
PTPRE-204ENST00000455661 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
PTPRE-204ENST00000455661 F6X3S4 739 aa16.46■□□□□ 0.23
PTPRE-204ENST00000455661 ATP2B3Q16720 1220 aa16.46■□□□□ 0.23
PTPRE-204ENST00000455661 AOX1Q06278 1338 aa16.46■□□□□ 0.23
PTPRE-204ENST00000455661 TCHHQ07283 1943 aa16.46■□□□□ 0.23
PTPRE-204ENST00000455661 F13A1P00488 732 aa16.45■□□□□ 0.22
PTPRE-204ENST00000455661 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPRE-204ENST00000455661 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
PTPRE-204ENST00000455661 STAG3Q9UJ98 1225 aa16.45■□□□□ 0.22
PTPRE-204ENST00000455661 SMC3Q9UQE7 1217 aa16.45■□□□□ 0.22
PTPRE-204ENST00000455661 TUBGCP6Q96RT7 1819 aa16.45■□□□□ 0.22
PTPRE-204ENST00000455661 RIOK3O14730 519 aaKnown RBP16.45■□□□□ 0.22
PTPRE-204ENST00000455661 FIBPO43427 364 aa16.45■□□□□ 0.22
PTPRE-204ENST00000455661 AEBP1Q8IUX7 1158 aa16.45■□□□□ 0.22
PTPRE-204ENST00000455661 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
PTPRE-204ENST00000455661 SYT1P21579 422 aa16.44■□□□□ 0.22
PTPRE-204ENST00000455661 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
PTPRE-204ENST00000455661 G2E3Q7L622 706 aa16.44■□□□□ 0.22
PTPRE-204ENST00000455661 FUCA2Q9BTY2 467 aa16.44■□□□□ 0.22
PTPRE-204ENST00000455661 LIMCH1Q9UPQ0 1083 aa16.44■□□□□ 0.22
PTPRE-204ENST00000455661 WASLO00401 505 aaPredicted RBP16.43■□□□□ 0.22
PTPRE-204ENST00000455661 CCDC192P0DO97 292 aa16.43■□□□□ 0.22
PTPRE-204ENST00000455661 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
PTPRE-204ENST00000455661 ANKRD7Q92527 254 aa16.43■□□□□ 0.22
PTPRE-204ENST00000455661 STK31Q9BXU1 1019 aa16.43■□□□□ 0.22
PTPRE-204ENST00000455661 UNC5CLQ8IV45 518 aa16.42■□□□□ 0.22
PTPRE-204ENST00000455661 KCNF1Q9H3M0 494 aa16.42■□□□□ 0.22
PTPRE-204ENST00000455661 PYCARDQ9ULZ3 195 aa16.42■□□□□ 0.22
PTPRE-204ENST00000455661 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
PTPRE-204ENST00000455661 SPC24Q8NBT2 197 aa16.42■□□□□ 0.22
PTPRE-204ENST00000455661 TSPYL4Q9UJ04 414 aa16.42■□□□□ 0.22
PTPRE-204ENST00000455661 PREX1Q8TCU6 1659 aa16.42■□□□□ 0.22
PTPRE-204ENST00000455661 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms