RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 CEP85Q6P2H3 762 aa20.8■□□□□ 0.92
SCUBE2-202ENST00000450649 RPAP2Q8IXW5 612 aaPredicted RBP20.8■□□□□ 0.92
SCUBE2-202ENST00000450649 SPTLC3Q9NUV7 552 aa20.8■□□□□ 0.92
SCUBE2-202ENST00000450649 WASLO00401 505 aaPredicted RBP20.79■□□□□ 0.92
SCUBE2-202ENST00000450649 NOL8Q76FK4 1167 aaKnown RBP20.79■□□□□ 0.92
SCUBE2-202ENST00000450649 BCL2L12Q9HB09 334 aa20.79■□□□□ 0.92
SCUBE2-202ENST00000450649 USP48Q86UV5 1035 aa20.78■□□□□ 0.92
SCUBE2-202ENST00000450649 A2ML1A8K2U0 1454 aa20.78■□□□□ 0.92
SCUBE2-202ENST00000450649 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
SCUBE2-202ENST00000450649 COG3Q96JB2 828 aa20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 SETD1AO15047 1707 aaKnown RBP20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 FAM83GA6ND36 823 aa20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 KIF20AO95235 890 aa20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 INTS4Q96HW7 963 aaKnown RBP20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
SCUBE2-202ENST00000450649 HAP1P54257 671 aaPredicted RBP20.76■□□□□ 0.91
SCUBE2-202ENST00000450649 HCLS1P14317 486 aaPredicted RBP20.75■□□□□ 0.91
SCUBE2-202ENST00000450649 PDCL2Q8N4E4 241 aa20.75■□□□□ 0.91
SCUBE2-202ENST00000450649 SPDYE4A6NLX3 237 aa20.74■□□□□ 0.91
SCUBE2-202ENST00000450649 LETM1O95202 739 aaPredicted RBP20.74■□□□□ 0.91
SCUBE2-202ENST00000450649 PALD1Q9ULE6 856 aa20.74■□□□□ 0.91
SCUBE2-202ENST00000450649 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
SCUBE2-202ENST00000450649 DCTN1Q14203 1278 aa20.74■□□□□ 0.91
SCUBE2-202ENST00000450649 RRS1Q15050 365 aaKnown RBP20.74■□□□□ 0.91
SCUBE2-202ENST00000450649 CCDC183Q5T5S1 534 aa20.74■□□□□ 0.91
SCUBE2-202ENST00000450649 RTL1A6NKG5 1358 aa20.73■□□□□ 0.91
SCUBE2-202ENST00000450649 PDE1AP54750 535 aa20.73■□□□□ 0.91
SCUBE2-202ENST00000450649 NUDT16Q96DE0 195 aaKnown RBP20.73■□□□□ 0.91
SCUBE2-202ENST00000450649 CPS1P31327 1500 aa20.73■□□□□ 0.91
SCUBE2-202ENST00000450649 CCDC61Q9Y6R9 512 aa20.72■□□□□ 0.91
SCUBE2-202ENST00000450649 RGS12O14924 1447 aa20.72■□□□□ 0.91
SCUBE2-202ENST00000450649 KDM4AO75164 1064 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 MCCP23508 829 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 KRT24Q2M2I5 525 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 MEIS3Q99687 375 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 ESYT1Q9BSJ8 1104 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 OSBPL3Q9H4L5 887 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 WDR33Q9C0J8 1336 aaKnown RBP20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 TPRNQ4KMQ1 711 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 MSH6P52701 1360 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 MX1P20591 662 aa20.71■□□□□ 0.91
SCUBE2-202ENST00000450649 MON2Q7Z3U7 1717 aa20.7■□□□□ 0.9
SCUBE2-202ENST00000450649 RIOK3O14730 519 aaKnown RBP20.7■□□□□ 0.9
SCUBE2-202ENST00000450649 KIAA1524Q8TCG1 905 aa20.7■□□□□ 0.9
SCUBE2-202ENST00000450649 DIAPH3Q9NSV4 1193 aa20.7■□□□□ 0.9
SCUBE2-202ENST00000450649 SPATA31D1Q6ZQQ2 1576 aa20.7■□□□□ 0.9
SCUBE2-202ENST00000450649 CHL1O00533 1208 aa20.7■□□□□ 0.9
SCUBE2-202ENST00000450649 PLCB2Q00722 1185 aa20.7■□□□□ 0.9
SCUBE2-202ENST00000450649 KIAA0232Q92628 1395 aa20.69■□□□□ 0.9
SCUBE2-202ENST00000450649 U2AF2P26368 475 aaKnown RBP eCLIP20.69■□□□□ 0.9
SCUBE2-202ENST00000450649 TMEM87AQ8NBN3 555 aa20.69■□□□□ 0.9
SCUBE2-202ENST00000450649 UPF3BQ9BZI7 483 aaKnown RBP20.69■□□□□ 0.9
SCUBE2-202ENST00000450649 SRCIN1Q9C0H9 1055 aa20.69■□□□□ 0.9
SCUBE2-202ENST00000450649 PTPRCP08575 1304 aa20.69■□□□□ 0.9
SCUBE2-202ENST00000450649 ANAPC15P60006 121 aa20.68■□□□□ 0.9
SCUBE2-202ENST00000450649 CHAF1AQ13111 956 aaPredicted RBP20.68■□□□□ 0.9
SCUBE2-202ENST00000450649 TSHZ3Q63HK5 1081 aa20.68■□□□□ 0.9
SCUBE2-202ENST00000450649 ANKRD7Q92527 254 aa20.68■□□□□ 0.9
SCUBE2-202ENST00000450649 SIRT1Q96EB6 747 aa20.68■□□□□ 0.9
SCUBE2-202ENST00000450649 PYCARDQ9ULZ3 195 aa20.68■□□□□ 0.9
SCUBE2-202ENST00000450649 ANO2Q9NQ90 1003 aa20.68■□□□□ 0.9
SCUBE2-202ENST00000450649 TCHHQ07283 1943 aa20.68■□□□□ 0.9
SCUBE2-202ENST00000450649 CNPY2Q9Y2B0 182 aa20.67■□□□□ 0.9
SCUBE2-202ENST00000450649 NRKQ7Z2Y5 1582 aa20.67■□□□□ 0.9
SCUBE2-202ENST00000450649 AGLP35573 1532 aa20.67■□□□□ 0.9
SCUBE2-202ENST00000450649 METP08581 1390 aa20.67■□□□□ 0.9
SCUBE2-202ENST00000450649 KCNF1Q9H3M0 494 aa20.67■□□□□ 0.9
SCUBE2-202ENST00000450649 C3P01024 1663 aa20.67■□□□□ 0.9
SCUBE2-202ENST00000450649 NCKAP5LQ9HCH0 1330 aa20.66■□□□□ 0.9
SCUBE2-202ENST00000450649 NRXN3Q9Y4C0 1643 aa20.66■□□□□ 0.9
SCUBE2-202ENST00000450649 EIF4A2Q14240 407 aaKnown RBP20.66■□□□□ 0.9
SCUBE2-202ENST00000450649 SULT6B1Q6IMI4 303 aa20.66■□□□□ 0.9
SCUBE2-202ENST00000450649 TXNDC2Q86VQ3 553 aa20.66■□□□□ 0.9
SCUBE2-202ENST00000450649 AP5Z1O43299 807 aa20.65■□□□□ 0.9
SCUBE2-202ENST00000450649 HMMRO75330 724 aa20.65■□□□□ 0.9
SCUBE2-202ENST00000450649 FGD1P98174 961 aa20.65■□□□□ 0.9
SCUBE2-202ENST00000450649 AEBP1Q8IUX7 1158 aa20.65■□□□□ 0.9
SCUBE2-202ENST00000450649 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCUBE2-202ENST00000450649 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
SCUBE2-202ENST00000450649 IGSF3O75054 1194 aa20.65■□□□□ 0.9
SCUBE2-202ENST00000450649 CTIFO43310 598 aaKnown RBP20.64■□□□□ 0.9
SCUBE2-202ENST00000450649 TECPR2O15040 1411 aa20.64■□□□□ 0.9
SCUBE2-202ENST00000450649 AKAP12Q02952 1782 aa20.64■□□□□ 0.89
SCUBE2-202ENST00000450649 UBE2HP62256 183 aa20.64■□□□□ 0.89
SCUBE2-202ENST00000450649 CHMLP26374 656 aa20.63■□□□□ 0.89
SCUBE2-202ENST00000450649 FUCA2Q9BTY2 467 aa20.63■□□□□ 0.89
SCUBE2-202ENST00000450649 GIMAP6Q6P9H5 292 aa20.63■□□□□ 0.89
SCUBE2-202ENST00000450649 SPC24Q8NBT2 197 aa20.62■□□□□ 0.89
SCUBE2-202ENST00000450649 RILPL2Q969X0 211 aa20.62■□□□□ 0.89
SCUBE2-202ENST00000450649 TPM3P06753 285 aa20.62■□□□□ 0.89
SCUBE2-202ENST00000450649 MCM10Q7L590 875 aa20.61■□□□□ 0.89
SCUBE2-202ENST00000450649 EXOC6BQ9Y2D4 811 aa20.61■□□□□ 0.89
SCUBE2-202ENST00000450649 TRIM6-TRIM34B2RNG4 842 aa20.61■□□□□ 0.89
SCUBE2-202ENST00000450649 ITSN1Q15811 1721 aa20.61■□□□□ 0.89
SCUBE2-202ENST00000450649 ZSCAN22P10073 491 aaPredicted RBP20.6■□□□□ 0.89
SCUBE2-202ENST00000450649 IL17RAQ96F46 866 aa20.6■□□□□ 0.89
SCUBE2-202ENST00000450649 FEZ1Q99689 392 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms