RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
ACTN4-204ENST00000440400 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
ACTN4-204ENST00000440400 HOXB7P09629 217 aa16.69■□□□□ 0.26
ACTN4-204ENST00000440400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.69■□□□□ 0.26
ACTN4-204ENST00000440400 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
ACTN4-204ENST00000440400 MEGF6O75095 1541 aa16.69■□□□□ 0.26
ACTN4-204ENST00000440400 USHBP1Q8N6Y0 703 aa16.69■□□□□ 0.26
ACTN4-204ENST00000440400 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
ACTN4-204ENST00000440400 PLEKHO1Q53GL0 409 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-204ENST00000440400 ITPRIPQ8IWB1 547 aa16.68■□□□□ 0.26
ACTN4-204ENST00000440400 LRRC59Q96AG4 307 aaKnown RBP16.68■□□□□ 0.26
ACTN4-204ENST00000440400 UBR2Q8IWV8 1755 aa16.68■□□□□ 0.26
ACTN4-204ENST00000440400 C5P01031 1676 aa16.67■□□□□ 0.26
ACTN4-204ENST00000440400 C8orf34Q49A92 452 aa16.67■□□□□ 0.26
ACTN4-204ENST00000440400 LAMB4A4D0S4 1761 aa16.67■□□□□ 0.26
ACTN4-204ENST00000440400 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
ACTN4-204ENST00000440400 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
ACTN4-204ENST00000440400 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
ACTN4-204ENST00000440400 LTV1Q96GA3 475 aaPredicted RBP16.67■□□□□ 0.26
ACTN4-204ENST00000440400 SLAIN2Q9P270 581 aa16.67■□□□□ 0.26
ACTN4-204ENST00000440400 ROBO1Q9Y6N7 1651 aa16.67■□□□□ 0.26
ACTN4-204ENST00000440400 COL5A2P05997 1499 aaPredicted RBP16.66■□□□□ 0.26
ACTN4-204ENST00000440400 DDX17Q92841 729 aaKnown RBP16.66■□□□□ 0.26
ACTN4-204ENST00000440400 IBTKQ9P2D0 1353 aaPredicted RBP16.66■□□□□ 0.26
ACTN4-204ENST00000440400 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
ACTN4-204ENST00000440400 COL14A1Q05707 1796 aaKnown RBP16.65■□□□□ 0.26
ACTN4-204ENST00000440400 SKAP1Q86WV1 359 aa16.65■□□□□ 0.26
ACTN4-204ENST00000440400 COL16A1Q07092 1604 aaPredicted RBP16.65■□□□□ 0.26
ACTN4-204ENST00000440400 RNMTO43148 476 aaKnown RBP16.64■□□□□ 0.25
ACTN4-204ENST00000440400 FAM161AQ3B820 660 aa16.64■□□□□ 0.25
ACTN4-204ENST00000440400 ZMYND15Q9H091 742 aa16.64■□□□□ 0.25
ACTN4-204ENST00000440400 ELL2O00472 640 aaPredicted RBP16.63■□□□□ 0.25
ACTN4-204ENST00000440400 EIF4A1P60842 406 aaKnown RBP16.63■□□□□ 0.25
ACTN4-204ENST00000440400 PDZRN3Q9UPQ7 1066 aa16.63■□□□□ 0.25
ACTN4-204ENST00000440400 GSE1Q14687 1217 aa16.62■□□□□ 0.25
ACTN4-204ENST00000440400 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
ACTN4-204ENST00000440400 CCDC30Q5VVM6 783 aa16.61■□□□□ 0.25
ACTN4-204ENST00000440400 ZNF530Q6P9A1 599 aaPredicted RBP16.61■□□□□ 0.25
ACTN4-204ENST00000440400 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
ACTN4-204ENST00000440400 NUCB1Q02818 461 aa16.61■□□□□ 0.25
ACTN4-204ENST00000440400 SIRT2Q8IXJ6 389 aa16.6■□□□□ 0.25
ACTN4-204ENST00000440400 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
ACTN4-204ENST00000440400 TUBGCP6Q96RT7 1819 aa16.6■□□□□ 0.25
ACTN4-204ENST00000440400 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
ACTN4-204ENST00000440400 GCC1Q96CN9 775 aa16.59■□□□□ 0.25
ACTN4-204ENST00000440400 CHMP4AQ9BY43 222 aa16.59■□□□□ 0.25
ACTN4-204ENST00000440400 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
ACTN4-204ENST00000440400 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
ACTN4-204ENST00000440400 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
ACTN4-204ENST00000440400 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.24
ACTN4-204ENST00000440400 LRP6O75581 1613 aa16.58■□□□□ 0.24
ACTN4-204ENST00000440400 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.24
ACTN4-204ENST00000440400 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
ACTN4-204ENST00000440400 PHKG2P15735 406 aa16.57■□□□□ 0.24
ACTN4-204ENST00000440400 C1orf141Q5JVX7 400 aa16.57■□□□□ 0.24
ACTN4-204ENST00000440400 G2E3Q7L622 706 aa16.57■□□□□ 0.24
ACTN4-204ENST00000440400 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
ACTN4-204ENST00000440400 CABLES1Q8TDN4 633 aa16.55■□□□□ 0.24
ACTN4-204ENST00000440400 SPG7Q9UQ90 795 aa16.55■□□□□ 0.24
ACTN4-204ENST00000440400 FLIIQ13045 1269 aa16.54■□□□□ 0.24
ACTN4-204ENST00000440400 TATP17735 454 aaPredicted RBP16.54■□□□□ 0.24
ACTN4-204ENST00000440400 RPAP2Q8IXW5 612 aaPredicted RBP16.54■□□□□ 0.24
ACTN4-204ENST00000440400 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
ACTN4-204ENST00000440400 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
ACTN4-204ENST00000440400 GLIPR1L2Q4G1C9 344 aa16.53■□□□□ 0.24
ACTN4-204ENST00000440400 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
ACTN4-204ENST00000440400 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
ACTN4-204ENST00000440400 DCTPP1Q9H773 170 aa16.53■□□□□ 0.24
ACTN4-204ENST00000440400 PHLPP1O60346 1717 aa16.53■□□□□ 0.24
ACTN4-204ENST00000440400 KCPQ6ZWJ8 1503 aa16.53■□□□□ 0.24
ACTN4-204ENST00000440400 ZBTB7CA1YPR0 619 aa16.52■□□□□ 0.24
ACTN4-204ENST00000440400 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
ACTN4-204ENST00000440400 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
ACTN4-204ENST00000440400 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
ACTN4-204ENST00000440400 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.24
ACTN4-204ENST00000440400 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
ACTN4-204ENST00000440400 TNS2Q63HR2 1409 aa16.52■□□□□ 0.23
ACTN4-204ENST00000440400 RGS3P49796 1198 aa16.52■□□□□ 0.23
ACTN4-204ENST00000440400 NUP188Q5SRE5 1749 aa16.51■□□□□ 0.23
ACTN4-204ENST00000440400 NWD2Q9ULI1 1742 aa16.51■□□□□ 0.23
ACTN4-204ENST00000440400 TEFQ10587 303 aa16.51■□□□□ 0.23
ACTN4-204ENST00000440400 CHD1LQ86WJ1 897 aa16.51■□□□□ 0.23
ACTN4-204ENST00000440400 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
ACTN4-204ENST00000440400 GIGYF1O75420 1035 aaPredicted RBP16.51■□□□□ 0.23
ACTN4-204ENST00000440400 IFNL2Q8IZJ0 200 aa16.51■□□□□ 0.23
ACTN4-204ENST00000440400 KCNQ3O43525 872 aa16.5■□□□□ 0.23
ACTN4-204ENST00000440400 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
ACTN4-204ENST00000440400 CICQ96RK0 1608 aaPredicted RBP16.5■□□□□ 0.23
ACTN4-204ENST00000440400 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
ACTN4-204ENST00000440400 NFKBIBQ15653 356 aa16.5■□□□□ 0.23
ACTN4-204ENST00000440400 HDGFL1Q5TGJ6 251 aa16.5■□□□□ 0.23
ACTN4-204ENST00000440400 NLRP2Q9NX02 1062 aa16.5■□□□□ 0.23
ACTN4-204ENST00000440400 CYP27B1O15528 508 aa16.49■□□□□ 0.23
ACTN4-204ENST00000440400 CHRNA2Q15822 529 aa16.49■□□□□ 0.23
ACTN4-204ENST00000440400 ADCY9O60503 1353 aa16.49■□□□□ 0.23
ACTN4-204ENST00000440400 ARFGEF2Q9Y6D5 1785 aa16.49■□□□□ 0.23
ACTN4-204ENST00000440400 MEIS3Q99687 375 aa16.48■□□□□ 0.23
ACTN4-204ENST00000440400 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
ACTN4-204ENST00000440400 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
ACTN4-204ENST00000440400 C1orf115Q9H7X2 142 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms