RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
ABCA8-202ENST00000428549 SOX12O15370 315 aa11.23□□□□□ -0.61
ABCA8-202ENST00000428549 APLP1P51693 650 aa11.23□□□□□ -0.61
ABCA8-202ENST00000428549 CABP1Q9NZU7 370 aa11.23□□□□□ -0.61
ABCA8-202ENST00000428549 KLHL42Q9P2K6 505 aa11.23□□□□□ -0.61
ABCA8-202ENST00000428549 IVNS1ABPQ9Y6Y0 642 aa11.23□□□□□ -0.61
ABCA8-202ENST00000428549 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
ABCA8-202ENST00000428549 CGNL1Q0VF96 1302 aa11.23□□□□□ -0.61
ABCA8-202ENST00000428549 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
ABCA8-202ENST00000428549 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
ABCA8-202ENST00000428549 EDC4Q6P2E9 1401 aaKnown RBP11.22□□□□□ -0.61
ABCA8-202ENST00000428549 SEMA3EO15041 775 aa11.21□□□□□ -0.61
ABCA8-202ENST00000428549 PAX3P23760 479 aa11.21□□□□□ -0.61
ABCA8-202ENST00000428549 CC2D1BQ5T0F9 858 aaKnown RBP11.21□□□□□ -0.61
ABCA8-202ENST00000428549 CXorf38Q8TB03 319 aa11.21□□□□□ -0.61
ABCA8-202ENST00000428549 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
ABCA8-202ENST00000428549 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.61
ABCA8-202ENST00000428549 GOLIM4O00461 696 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 FOXO3O43524 673 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 BRD4O60885 1362 aaPredicted RBP11.2□□□□□ -0.62
ABCA8-202ENST00000428549 SSFA2P28290 1259 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 MCM6Q14566 821 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
ABCA8-202ENST00000428549 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
ABCA8-202ENST00000428549 ANKRD26Q9UPS8 1709 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 KIF20BQ96Q89 1820 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 PHLPP1O60346 1717 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
ABCA8-202ENST00000428549 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
ABCA8-202ENST00000428549 CCDC194A0A1B0GVG4 234 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 KIF4AO95239 1232 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 NLRP13Q86W25 1043 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 RBM46Q8TBY0 533 aaKnown RBP11.2□□□□□ -0.62
ABCA8-202ENST00000428549 NUB1Q9Y5A7 615 aa11.2□□□□□ -0.62
ABCA8-202ENST00000428549 SOS2Q07890 1332 aaPredicted RBP11.19□□□□□ -0.62
ABCA8-202ENST00000428549 SETDB1Q15047 1291 aa11.19□□□□□ -0.62
ABCA8-202ENST00000428549 PMM1Q92871 262 aa11.19□□□□□ -0.62
ABCA8-202ENST00000428549 JADE2Q9NQC1 790 aa11.19□□□□□ -0.62
ABCA8-202ENST00000428549 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
ABCA8-202ENST00000428549 JCADQ9P266 1359 aa11.18□□□□□ -0.62
ABCA8-202ENST00000428549 RGPD8O14715 1765 aaPredicted RBP11.18□□□□□ -0.62
ABCA8-202ENST00000428549 TRIM66O15016 1216 aa11.18□□□□□ -0.62
ABCA8-202ENST00000428549 ZRANB2O95218 330 aaKnown RBP eCLIP11.18□□□□□ -0.62
ABCA8-202ENST00000428549 PSME1Q06323 249 aa11.18□□□□□ -0.62
ABCA8-202ENST00000428549 PMFBP1Q8TBY8 1022 aa11.18□□□□□ -0.62
ABCA8-202ENST00000428549 SPOCK3Q9BQ16 436 aa11.18□□□□□ -0.62
ABCA8-202ENST00000428549 USP6P35125 1406 aa11.18□□□□□ -0.62
ABCA8-202ENST00000428549 EPB41L2O43491 1005 aaKnown RBP11.17□□□□□ -0.62
ABCA8-202ENST00000428549 PARNO95453 639 aaKnown RBP11.17□□□□□ -0.62
ABCA8-202ENST00000428549 ZNF280DQ6N043 979 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 NGDNQ8NEJ9 315 aaKnown RBP11.17□□□□□ -0.62
ABCA8-202ENST00000428549 VTI1AQ96AJ9 217 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
ABCA8-202ENST00000428549 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 ACEP12821 1306 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 ARMCX6Q7L4S7 300 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 OTUD6BQ8N6M0 293 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 MKL1Q969V6 931 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
ABCA8-202ENST00000428549 KIF1AQ12756 1690 aa11.16□□□□□ -0.62
ABCA8-202ENST00000428549 COL16A1Q07092 1604 aaPredicted RBP11.16□□□□□ -0.62
ABCA8-202ENST00000428549 RRP9O43818 475 aaKnown RBP11.16□□□□□ -0.62
ABCA8-202ENST00000428549 POLD1P28340 1107 aa11.16□□□□□ -0.62
ABCA8-202ENST00000428549 XPCQ01831 940 aaPredicted RBP11.16□□□□□ -0.62
ABCA8-202ENST00000428549 SSH2Q76I76 1423 aa11.16□□□□□ -0.62
ABCA8-202ENST00000428549 FYB1O15117 783 aa11.15□□□□□ -0.62
ABCA8-202ENST00000428549 APPP05067 770 aa11.15□□□□□ -0.62
ABCA8-202ENST00000428549 PPP2R1AP30153 589 aa11.15□□□□□ -0.62
ABCA8-202ENST00000428549 ZC3H6P61129 1189 aaKnown RBP11.15□□□□□ -0.62
ABCA8-202ENST00000428549 HDAC1Q13547 482 aaPredicted RBP11.15□□□□□ -0.62
ABCA8-202ENST00000428549 MORC1Q86VD1 984 aa11.15□□□□□ -0.62
ABCA8-202ENST00000428549 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
ABCA8-202ENST00000428549 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
ABCA8-202ENST00000428549 COMMD10Q9Y6G5 202 aa11.15□□□□□ -0.62
ABCA8-202ENST00000428549 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
ABCA8-202ENST00000428549 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
ABCA8-202ENST00000428549 RHBDL3P58872 404 aa11.14□□□□□ -0.63
ABCA8-202ENST00000428549 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
ABCA8-202ENST00000428549 CSPP1Q1MSJ5 1256 aa11.14□□□□□ -0.63
ABCA8-202ENST00000428549 CCDC184Q52MB2 194 aa11.14□□□□□ -0.63
ABCA8-202ENST00000428549 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
ABCA8-202ENST00000428549 NOP58Q9Y2X3 529 aaKnown RBP11.14□□□□□ -0.63
ABCA8-202ENST00000428549 PXDNQ92626 1479 aa11.14□□□□□ -0.63
ABCA8-202ENST00000428549 U2SURPO15042 1029 aaKnown RBP11.13□□□□□ -0.63
ABCA8-202ENST00000428549 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
ABCA8-202ENST00000428549 NBPF9Q3BBW0 867 aa11.13□□□□□ -0.63
ABCA8-202ENST00000428549 POM121Q96HA1 1249 aa11.13□□□□□ -0.63
ABCA8-202ENST00000428549 SPATA31A3Q5VYP0 1347 aa11.13□□□□□ -0.63
ABCA8-202ENST00000428549 TTC21BQ7Z4L5 1316 aa11.13□□□□□ -0.63
ABCA8-202ENST00000428549 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.13□□□□□ -0.63
ABCA8-202ENST00000428549 SBNO1A3KN83 1393 aa11.12□□□□□ -0.63
ABCA8-202ENST00000428549 USP54Q70EL1 1684 aa11.12□□□□□ -0.63
ABCA8-202ENST00000428549 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
ABCA8-202ENST00000428549 DPH6Q7L8W6 267 aa11.12□□□□□ -0.63
ABCA8-202ENST00000428549 EGFL6Q8IUX8 553 aa11.12□□□□□ -0.63
ABCA8-202ENST00000428549 GGNBP2Q9H3C7 697 aa11.12□□□□□ -0.63
ABCA8-202ENST00000428549 FEZ2Q9UHY8 353 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms