RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ZNF831Q5JPB2 1677 aa41.56■■■■■ 4.24
TRAF3IP1-203ENST00000409739 ZNF827Q17R98 1081 aa41.56■■■■■ 4.24
TRAF3IP1-203ENST00000409739 LGR6Q9HBX8 967 aa41.56■■■■■ 4.24
TRAF3IP1-203ENST00000409739 ATG3Q9NT62 314 aa41.56■■■■■ 4.24
TRAF3IP1-203ENST00000409739 RNMTO43148 476 aaKnown RBP41.55■■■■■ 4.24
TRAF3IP1-203ENST00000409739 C4BP0C0L5 1744 aa41.53■■■■■ 4.24
TRAF3IP1-203ENST00000409739 NFATC2IPQ8NCF5 419 aa41.52■■■■■ 4.24
TRAF3IP1-203ENST00000409739 AKT1S1Q96B36 256 aa41.52■■■■■ 4.24
TRAF3IP1-203ENST00000409739 SLC52A2Q9HAB3 445 aa41.5■■■■■ 4.23
TRAF3IP1-203ENST00000409739 LOC102724428A0A0B4J2F2 783 aa41.49■■■■■ 4.23
TRAF3IP1-203ENST00000409739 GNAT3A8MTJ3 354 aa41.49■■■■■ 4.23
TRAF3IP1-203ENST00000409739 SIK1P57059 783 aa41.49■■■■■ 4.23
TRAF3IP1-203ENST00000409739 COL5A3P25940 1745 aaPredicted RBP41.49■■■■■ 4.23
TRAF3IP1-203ENST00000409739 PDGFDQ9GZP0 370 aaPredicted RBP41.46■■■■■ 4.23
TRAF3IP1-203ENST00000409739 UBR3Q6ZT12 1888 aa41.46■■■■■ 4.23
TRAF3IP1-203ENST00000409739 CICQ96RK0 1608 aaPredicted RBP41.45■■■■■ 4.23
TRAF3IP1-203ENST00000409739 PLEKHF1Q96S99 279 aa41.45■■■■■ 4.23
TRAF3IP1-203ENST00000409739 UBR2Q8IWV8 1755 aa41.45■■■■■ 4.23
TRAF3IP1-203ENST00000409739 TJP1Q07157 1748 aa41.43■■■■■ 4.22
TRAF3IP1-203ENST00000409739 IL17REQ8NFR9 667 aa41.42■■■■■ 4.22
TRAF3IP1-203ENST00000409739 CEMIPQ8WUJ3 1361 aa41.4■■■■■ 4.22
TRAF3IP1-203ENST00000409739 ITPK1Q13572 414 aa41.39■■■■■ 4.22
TRAF3IP1-203ENST00000409739 NEFMP07197 916 aa41.38■■■■■ 4.21
TRAF3IP1-203ENST00000409739 HMGB2P26583 209 aaKnown RBP41.38■■■■■ 4.21
TRAF3IP1-203ENST00000409739 ATP6V1AP38606 617 aa41.38■■■■■ 4.21
TRAF3IP1-203ENST00000409739 SLC4A9Q96Q91 983 aa41.38■■■■■ 4.21
TRAF3IP1-203ENST00000409739 RBM42Q9BTD8 480 aaKnown RBP41.38■■■■■ 4.21
TRAF3IP1-203ENST00000409739 PNNQ9H307 717 aaKnown RBP41.38■■■■■ 4.21
TRAF3IP1-203ENST00000409739 TFCP2L1Q9NZI6 479 aa41.38■■■■■ 4.21
TRAF3IP1-203ENST00000409739 LINC00116Q8NCU8 138 aa41.37■■■■■ 4.21
TRAF3IP1-203ENST00000409739 KCPQ6ZWJ8 1503 aa41.37■■■■■ 4.21
TRAF3IP1-203ENST00000409739 PNPLA7Q6ZV29 1317 aa41.37■■■■■ 4.21
TRAF3IP1-203ENST00000409739 MYH14Q7Z406 1995 aaKnown RBP41.34■■■■■ 4.21
TRAF3IP1-203ENST00000409739 MAPK8IP3Q9UPT6 1336 aa41.34■■■■■ 4.21
TRAF3IP1-203ENST00000409739 PTCD1O75127 700 aaKnown RBP41.33■■■■■ 4.21
TRAF3IP1-203ENST00000409739 TEFQ10587 303 aa41.33■■■■■ 4.21
TRAF3IP1-203ENST00000409739 SLC39A6Q13433 755 aa41.32■■■■■ 4.21
TRAF3IP1-203ENST00000409739 WDR43Q15061 677 aaKnown RBP eCLIP41.32■■■■■ 4.21
TRAF3IP1-203ENST00000409739 COL24A1Q17RW2 1714 aa41.31■■■■■ 4.2
TRAF3IP1-203ENST00000409739 ANP32CO43423 234 aa41.3■■■■■ 4.2
TRAF3IP1-203ENST00000409739 ZBTB7AO95365 584 aa41.3■■■■■ 4.2
TRAF3IP1-203ENST00000409739 RTF1Q92541 710 aaKnown RBP41.3■■■■■ 4.2
TRAF3IP1-203ENST00000409739 NFE2L2Q16236 605 aa41.29■■■■■ 4.2
TRAF3IP1-203ENST00000409739 MCM10Q7L590 875 aa41.29■■■■■ 4.2
TRAF3IP1-203ENST00000409739 AK7Q96M32 723 aa41.29■■■■■ 4.2
TRAF3IP1-203ENST00000409739 SPON1Q9HCB6 807 aa41.29■■■■■ 4.2
TRAF3IP1-203ENST00000409739 HTATSF1O43719 755 aaKnown RBP41.28■■■■■ 4.2
TRAF3IP1-203ENST00000409739 DCTN1Q14203 1278 aa41.26■■■■■ 4.2
TRAF3IP1-203ENST00000409739 AMIGO3Q86WK7 504 aa41.24■■■■■ 4.19
TRAF3IP1-203ENST00000409739 MTFR1LQ9H019 292 aa41.24■■■■■ 4.19
TRAF3IP1-203ENST00000409739 ADAMTS8Q9UP79 889 aa41.24■■■■■ 4.19
TRAF3IP1-203ENST00000409739 CCDC184Q52MB2 194 aa41.23■■■■■ 4.19
TRAF3IP1-203ENST00000409739 COL23A1Q86Y22 540 aaPredicted RBP41.22■■■■■ 4.19
TRAF3IP1-203ENST00000409739 CCDC146Q8IYE0 955 aa41.22■■■■■ 4.19
TRAF3IP1-203ENST00000409739 ATF5Q9Y2D1 282 aaPredicted RBP41.21■■■■■ 4.19
TRAF3IP1-203ENST00000409739 CNTNAP4Q9C0A0 1308 aa41.2■■■■■ 4.19
TRAF3IP1-203ENST00000409739 KDM3BQ7LBC6 1761 aa41.2■■■■■ 4.19
TRAF3IP1-203ENST00000409739 GNPATO15228 680 aa41.19■■■■■ 4.18
TRAF3IP1-203ENST00000409739 ZNF790Q6PG37 636 aa41.19■■■■■ 4.18
TRAF3IP1-203ENST00000409739 TTC5Q8N0Z6 440 aa41.19■■■■■ 4.18
TRAF3IP1-203ENST00000409739 SLC16A10Q8TF71 515 aa41.19■■■■■ 4.18
TRAF3IP1-203ENST00000409739 C4AP0C0L4 1744 aa41.18■■■■■ 4.18
TRAF3IP1-203ENST00000409739 FLAD1Q8NFF5 587 aa41.17■■■■■ 4.18
TRAF3IP1-203ENST00000409739 RUNDC1Q96C34 613 aa41.17■■■■■ 4.18
TRAF3IP1-203ENST00000409739 BTBD11A6QL63 1104 aa41.16■■■■■ 4.18
TRAF3IP1-203ENST00000409739 PTGER2P43116 358 aa41.16■■■■■ 4.18
TRAF3IP1-203ENST00000409739 RC3H1Q5TC82 1133 aaKnown RBP41.16■■■■■ 4.18
TRAF3IP1-203ENST00000409739 SMIM5Q71RC9 77 aa41.16■■■■■ 4.18
TRAF3IP1-203ENST00000409739 PHF14O94880 888 aa41.15■■■■■ 4.18
TRAF3IP1-203ENST00000409739 SSFA2P28290 1259 aa41.15■■■■■ 4.18
TRAF3IP1-203ENST00000409739 DNAJC10Q8IXB1 793 aa41.15■■■■■ 4.18
TRAF3IP1-203ENST00000409739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP41.14■■■■■ 4.18
TRAF3IP1-203ENST00000409739 MSH5O43196 834 aa41.14■■■■■ 4.18
TRAF3IP1-203ENST00000409739 TMPOP42166 694 aaKnown RBP41.14■■■■■ 4.18
TRAF3IP1-203ENST00000409739 ZNF496Q96IT1 587 aaPredicted RBP41.13■■■■■ 4.17
TRAF3IP1-203ENST00000409739 SGIP1Q9BQI5 828 aa41.13■■■■■ 4.17
TRAF3IP1-203ENST00000409739 VSIG10Q8N0Z9 540 aa41.12■■■■■ 4.17
TRAF3IP1-203ENST00000409739 CRKLP46109 303 aaKnown RBP41.11■■■■■ 4.17
TRAF3IP1-203ENST00000409739 RIPK4P57078 832 aa41.11■■■■■ 4.17
TRAF3IP1-203ENST00000409739 THUMPD2Q9BTF0 503 aaKnown RBP41.11■■■■■ 4.17
TRAF3IP1-203ENST00000409739 HEG1Q9ULI3 1381 aa41.11■■■■■ 4.17
TRAF3IP1-203ENST00000409739 KCNQ3O43525 872 aa41.1■■■■■ 4.17
TRAF3IP1-203ENST00000409739 RRP7AQ9Y3A4 280 aaKnown RBP41.09■■■■■ 4.17
TRAF3IP1-203ENST00000409739 RTCBQ9Y3I0 505 aaKnown RBP41.09■■■■■ 4.17
TRAF3IP1-203ENST00000409739 MRS2Q9HD23 443 aa41.08■■■■■ 4.17
TRAF3IP1-203ENST00000409739 TAF7Q15545 349 aaPredicted RBP41.07■■■■■ 4.17
TRAF3IP1-203ENST00000409739 PPP1R1BQ9UD71 204 aaPredicted RBP41.07■■■■■ 4.17
TRAF3IP1-203ENST00000409739 CYP19A1P11511 503 aaPredicted RBP41.06■■■■■ 4.16
TRAF3IP1-203ENST00000409739 FMNL2Q96PY5 1086 aa41.06■■■■■ 4.16
TRAF3IP1-203ENST00000409739 RPS6KA4O75676 772 aa41.05■■■■■ 4.16
TRAF3IP1-203ENST00000409739 LMOD3Q0VAK6 560 aa41.04■■■■■ 4.16
TRAF3IP1-203ENST00000409739 INTS5Q6P9B9 1019 aaKnown RBP41.04■■■■■ 4.16
TRAF3IP1-203ENST00000409739 LAMB4A4D0S4 1761 aa41.04■■■■■ 4.16
TRAF3IP1-203ENST00000409739 NEUROD2Q15784 382 aa41.03■■■■■ 4.16
TRAF3IP1-203ENST00000409739 CCDC87Q9NVE4 849 aa41.03■■■■■ 4.16
TRAF3IP1-203ENST00000409739 ADRA2BP18089 450 aa41.01■■■■■ 4.16
TRAF3IP1-203ENST00000409739 MSL1Q68DK7 614 aa41.01■■■■■ 4.16
TRAF3IP1-203ENST00000409739 TRAPPC3LQ5T215 181 aa41■■■■■ 4.15
TRAF3IP1-203ENST00000409739 PNISRQ8TF01 805 aaKnown RBP41■■■■■ 4.15
TRAF3IP1-203ENST00000409739 MIS18AQ9NYP9 233 aa41■■■■■ 4.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms